RNA–Protein interactions for RNA: ENST00000291842.9

SHKBP1-201, Transcript of SH3KBP1 binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHKBP1, Length 2,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-201ENST00000291842 WDR74Q6RFH5 385 aaPredicted RBP16.53■□□□□ 0.24
SHKBP1-201ENST00000291842 BTN2A1Q7KYR7 527 aa16.53■□□□□ 0.24
SHKBP1-201ENST00000291842 PLCZ1Q86YW0 608 aa16.53■□□□□ 0.24
SHKBP1-201ENST00000291842 PLPP5Q8NEB5 264 aa16.53■□□□□ 0.24
SHKBP1-201ENST00000291842 ARL5BQ96KC2 179 aa16.53■□□□□ 0.24
SHKBP1-201ENST00000291842 OR10A4Q9H209 315 aa16.53■□□□□ 0.24
SHKBP1-201ENST00000291842 SEMA5BQ9P283 1151 aa16.53■□□□□ 0.24
SHKBP1-201ENST00000291842 COPZ2Q9P299 210 aa16.53■□□□□ 0.24
SHKBP1-201ENST00000291842 OR6C76A6NM76 312 aa16.52■□□□□ 0.24
SHKBP1-201ENST00000291842 SHISA8B8ZZ34 492 aa16.52■□□□□ 0.24
SHKBP1-201ENST00000291842 KRT33AO76009 404 aa16.52■□□□□ 0.24
SHKBP1-201ENST00000291842 AHSA1O95433 338 aa16.52■□□□□ 0.24
SHKBP1-201ENST00000291842 HPXP02790 462 aa16.52■□□□□ 0.24
SHKBP1-201ENST00000291842 GALK2Q01415 458 aa16.52■□□□□ 0.24
SHKBP1-201ENST00000291842 TSSK4Q6SA08 328 aa16.52■□□□□ 0.24
SHKBP1-201ENST00000291842 WDFY1Q8IWB7 410 aa16.52■□□□□ 0.24
SHKBP1-201ENST00000291842 APCDD1LQ8NCL9 501 aa16.52■□□□□ 0.24
SHKBP1-201ENST00000291842 HAVCR1Q96D42 359 aa16.52■□□□□ 0.24
SHKBP1-201ENST00000291842 OR8B4Q96RC9 309 aa16.52■□□□□ 0.24
SHKBP1-201ENST00000291842 OR6C1Q96RD1 312 aa16.52■□□□□ 0.24
SHKBP1-201ENST00000291842 GON7Q9BXV9 100 aa16.52■□□□□ 0.24
SHKBP1-201ENST00000291842 MED11Q9P086 117 aa16.52■□□□□ 0.24
SHKBP1-201ENST00000291842 SUSD2Q9UGT4 822 aa16.52■□□□□ 0.24
SHKBP1-201ENST00000291842 TRBV5-7A0A0A0MS05 114 aa16.52■□□□□ 0.23
SHKBP1-201ENST00000291842 SLC22A23A1A5C7 686 aa16.52■□□□□ 0.23
SHKBP1-201ENST00000291842 ANKRD34BA5PLL1 514 aa16.52■□□□□ 0.23
SHKBP1-201ENST00000291842 SSNA1O43805 119 aa16.52■□□□□ 0.23
SHKBP1-201ENST00000291842 CALCBP10092 127 aa16.52■□□□□ 0.23
SHKBP1-201ENST00000291842 DCTDP32321 178 aa16.52■□□□□ 0.23
SHKBP1-201ENST00000291842 SLC17A1Q14916 467 aa16.52■□□□□ 0.23
SHKBP1-201ENST00000291842 PTCRAQ6ISU1 281 aaPredicted RBP16.52■□□□□ 0.23
SHKBP1-201ENST00000291842 ARSKQ6UWY0 536 aa16.52■□□□□ 0.23
SHKBP1-201ENST00000291842 OR11G2Q8NGC1 345 aa16.52■□□□□ 0.23
SHKBP1-201ENST00000291842 MIB2Q96AX9 1013 aa16.52■□□□□ 0.23
SHKBP1-201ENST00000291842 OR2M2Q96R28 347 aa16.52■□□□□ 0.23
SHKBP1-201ENST00000291842 STMN3Q9NZ72 180 aa16.52■□□□□ 0.23
SHKBP1-201ENST00000291842 COA3Q9Y2R0 106 aaPredicted RBP16.52■□□□□ 0.23
SHKBP1-201ENST00000291842 DMDP11532 3685 aa16.52■□□□□ 0.23
SHKBP1-201ENST00000291842 IGLV1-36A0A0B4J1U3 117 aa16.51■□□□□ 0.23
SHKBP1-201ENST00000291842 HEXBP07686 556 aa16.51■□□□□ 0.23
SHKBP1-201ENST00000291842 TAS2R20P59543 309 aa16.51■□□□□ 0.23
SHKBP1-201ENST00000291842 FMODQ06828 376 aa16.51■□□□□ 0.23
SHKBP1-201ENST00000291842 MFGE8Q08431 387 aaPredicted RBP16.51■□□□□ 0.23
SHKBP1-201ENST00000291842 RASGEF1BQ0VAM2 473 aa16.51■□□□□ 0.23
SHKBP1-201ENST00000291842 ANKRD37Q7Z713 158 aa16.51■□□□□ 0.23
SHKBP1-201ENST00000291842 OR51D1Q8NGF3 324 aa16.51■□□□□ 0.23
SHKBP1-201ENST00000291842 GRPEL2Q8TAA5 225 aa16.51■□□□□ 0.23
SHKBP1-201ENST00000291842 HYLS1Q96M11 299 aa16.51■□□□□ 0.23
SHKBP1-201ENST00000291842 MNTQ99583 582 aa16.51■□□□□ 0.23
SHKBP1-201ENST00000291842 C7orf50Q9BRJ6 194 aaKnown RBP16.51■□□□□ 0.23
SHKBP1-201ENST00000291842 FCER2P06734 321 aa16.51■□□□□ 0.23
SHKBP1-201ENST00000291842 RAB40ALP0C0E4 278 aa16.51■□□□□ 0.23
SHKBP1-201ENST00000291842 HTR2BP41595 481 aa16.51■□□□□ 0.23
SHKBP1-201ENST00000291842 VEGFCP49767 419 aa16.51■□□□□ 0.23
SHKBP1-201ENST00000291842 EFNB2P52799 333 aa16.51■□□□□ 0.23
SHKBP1-201ENST00000291842 EIF2B1Q14232 305 aaKnown RBP16.51■□□□□ 0.23
SHKBP1-201ENST00000291842 OR7A5Q15622 319 aa16.51■□□□□ 0.23
SHKBP1-201ENST00000291842 RHBDD2Q6NTF9 364 aa16.51■□□□□ 0.23
SHKBP1-201ENST00000291842 GUSBP11Q6P575 273 aa16.51■□□□□ 0.23
SHKBP1-201ENST00000291842 KRT77Q7Z794 578 aa16.51■□□□□ 0.23
SHKBP1-201ENST00000291842 C9orf62Q8N4C0 152 aa16.51■□□□□ 0.23
SHKBP1-201ENST00000291842 OR11H4Q8NGC9 324 aa16.51■□□□□ 0.23
SHKBP1-201ENST00000291842 OR56B4Q8NH76 319 aa16.51■□□□□ 0.23
SHKBP1-201ENST00000291842 RAB40AQ8WXH6 277 aa16.51■□□□□ 0.23
SHKBP1-201ENST00000291842 SNAPC3Q92966 411 aa16.51■□□□□ 0.23
SHKBP1-201ENST00000291842 ZFP64Q9NPA5 681 aa16.51■□□□□ 0.23
SHKBP1-201ENST00000291842 MGAT4AQ9UM21 535 aa16.51■□□□□ 0.23
SHKBP1-201ENST00000291842 HRH3Q9Y5N1 445 aa16.51■□□□□ 0.23
SHKBP1-201ENST00000291842 NKAIN1Q4KMZ8 207 aa16.5■□□□□ 0.23
SHKBP1-201ENST00000291842 WDR45BQ5MNZ6 344 aa16.5■□□□□ 0.23
SHKBP1-201ENST00000291842 CD276Q5ZPR3 534 aa16.5■□□□□ 0.23
SHKBP1-201ENST00000291842 SLC18B1Q6NT16 456 aa16.5■□□□□ 0.23
SHKBP1-201ENST00000291842 MAMSTRQ6ZN01 415 aa16.5■□□□□ 0.23
SHKBP1-201ENST00000291842 KMT5CQ86Y97 462 aa16.5■□□□□ 0.23
SHKBP1-201ENST00000291842 ZNF679Q8IYX0 411 aa16.5■□□□□ 0.23
SHKBP1-201ENST00000291842 SHDQ96IW2 340 aa16.5■□□□□ 0.23
SHKBP1-201ENST00000291842 ABHD6Q9BV23 337 aa16.5■□□□□ 0.23
SHKBP1-201ENST00000291842 SEMA4CQ9C0C4 833 aa16.5■□□□□ 0.23
SHKBP1-201ENST00000291842 PLEKHA1Q9HB21 404 aa16.5■□□□□ 0.23
SHKBP1-201ENST00000291842 ING4Q9UNL4 249 aa16.5■□□□□ 0.23
SHKBP1-201ENST00000291842 CENPBD1B2RD01 187 aa16.5■□□□□ 0.23
SHKBP1-201ENST00000291842 K7ESF4 209 aa16.5■□□□□ 0.23
SHKBP1-201ENST00000291842 GPR171O14626 319 aa16.5■□□□□ 0.23
SHKBP1-201ENST00000291842 PHYHO14832 338 aa16.5■□□□□ 0.23
SHKBP1-201ENST00000291842 ANXA3P12429 323 aa16.5■□□□□ 0.23
SHKBP1-201ENST00000291842 CXCL12P48061 93 aa16.5■□□□□ 0.23
SHKBP1-201ENST00000291842 FAM69BQ5VUD6 431 aa16.5■□□□□ 0.23
SHKBP1-201ENST00000291842 ZNF227Q86WZ6 799 aa16.5■□□□□ 0.23
SHKBP1-201ENST00000291842 ZNF431Q8TF32 576 aaPredicted RBP16.5■□□□□ 0.23
SHKBP1-201ENST00000291842 MCHR2Q969V1 340 aa16.5■□□□□ 0.23
SHKBP1-201ENST00000291842 C8orf44Q96CB5 159 aa16.5■□□□□ 0.23
SHKBP1-201ENST00000291842 NXPE2Q96DL1 559 aa16.5■□□□□ 0.23
SHKBP1-201ENST00000291842 VSX1Q9NZR4 365 aaPredicted RBP16.5■□□□□ 0.23
SHKBP1-201ENST00000291842 SLC23A1Q9UHI7 598 aa16.5■□□□□ 0.23
SHKBP1-201ENST00000291842 ADAMTS20P59510 1910 aa16.49■□□□□ 0.23
SHKBP1-201ENST00000291842 ZNF432O94892 652 aa16.49■□□□□ 0.23
SHKBP1-201ENST00000291842 ITGA5P08648 1049 aa16.49■□□□□ 0.23
SHKBP1-201ENST00000291842 IFNGR1P15260 489 aa16.49■□□□□ 0.23
SHKBP1-201ENST00000291842 PSMB1P20618 241 aaKnown RBP16.49■□□□□ 0.23
SHKBP1-201ENST00000291842 TMEM71Q6P5X7 295 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms