RNA–Protein interactions for RNA: ENST00000512431.5

DDX41-215, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-215ENST00000512431 NGFP01138 241 aa10.61□□□□□ -0.71
DDX41-215ENST00000512431 IGHV1-46P01743 117 aa10.61□□□□□ -0.71
DDX41-215ENST00000512431 C1QCP02747 245 aa10.61□□□□□ -0.71
DDX41-215ENST00000512431 BCHEP06276 602 aa10.61□□□□□ -0.71
DDX41-215ENST00000512431 AHCYP23526 432 aa10.61□□□□□ -0.71
DDX41-215ENST00000512431 LIPAP38571 399 aa10.61□□□□□ -0.71
DDX41-215ENST00000512431 SLC6A9P48067 706 aa10.61□□□□□ -0.71
DDX41-215ENST00000512431 LRRC74AQ0VAA2 488 aa10.61□□□□□ -0.71
DDX41-215ENST00000512431 PDCD1Q15116 288 aa10.61□□□□□ -0.71
DDX41-215ENST00000512431 TAF9Q16594 264 aa10.61□□□□□ -0.71
DDX41-215ENST00000512431 SLC36A2Q495M3 483 aa10.61□□□□□ -0.71
DDX41-215ENST00000512431 ESCO2Q56NI9 601 aa10.61□□□□□ -0.71
DDX41-215ENST00000512431 COX20Q5RI15 118 aa10.61□□□□□ -0.71
DDX41-215ENST00000512431 FAM205BPQ63HN1 556 aa10.61□□□□□ -0.71
DDX41-215ENST00000512431 BTNL3Q6UXE8 466 aa10.61□□□□□ -0.71
DDX41-215ENST00000512431 JAZF1Q86VZ6 243 aa10.61□□□□□ -0.71
DDX41-215ENST00000512431 IFT20Q8IY31 132 aa10.61□□□□□ -0.71
DDX41-215ENST00000512431 PAQR4Q8N4S7 273 aaPredicted RBP10.61□□□□□ -0.71
DDX41-215ENST00000512431 MNS1Q8NEH6 495 aa10.61□□□□□ -0.71
DDX41-215ENST00000512431 FGFBP3Q8TAT2 258 aa10.61□□□□□ -0.71
DDX41-215ENST00000512431 GTF3AQ92664 365 aaKnown RBP10.61□□□□□ -0.71
DDX41-215ENST00000512431 PPP1R36Q96LQ0 422 aa10.61□□□□□ -0.71
DDX41-215ENST00000512431 SH3GL3Q99963 347 aa10.61□□□□□ -0.71
DDX41-215ENST00000512431 AKTIPQ9H8T0 292 aa10.61□□□□□ -0.71
DDX41-215ENST00000512431 PPCSQ9HAB8 311 aa10.61□□□□□ -0.71
DDX41-215ENST00000512431 PATZ1Q9HBE1 687 aaKnown RBP10.61□□□□□ -0.71
DDX41-215ENST00000512431 TNFRSF19Q9NS68 423 aa10.61□□□□□ -0.71
DDX41-215ENST00000512431 SELENONQ9NZV5 590 aa10.61□□□□□ -0.71
DDX41-215ENST00000512431 ZDHHC8Q9ULC8 765 aa10.61□□□□□ -0.71
DDX41-215ENST00000512431 A0A0G2JPF8 293 aa10.6□□□□□ -0.71
DDX41-215ENST00000512431 HNRNPCL2B2RXH8 293 aa10.6□□□□□ -0.71
DDX41-215ENST00000512431 HNRNPCL3B7ZW38 293 aa10.6□□□□□ -0.71
DDX41-215ENST00000512431 E9PBE3 544 aa10.6□□□□□ -0.71
DDX41-215ENST00000512431 TM9SF1O15321 606 aa10.6□□□□□ -0.71
DDX41-215ENST00000512431 HNRNPCL1O60812 293 aaKnown RBP10.6□□□□□ -0.71
DDX41-215ENST00000512431 SERPINI2O75830 405 aa10.6□□□□□ -0.71
DDX41-215ENST00000512431 NDUFA7O95182 113 aa10.6□□□□□ -0.71
DDX41-215ENST00000512431 HPRP00739 348 aa10.6□□□□□ -0.71
DDX41-215ENST00000512431 HNRNPCL4P0DMR1 293 aa10.6□□□□□ -0.71
DDX41-215ENST00000512431 PPIAL4GP0DN37 164 aa10.6□□□□□ -0.71
DDX41-215ENST00000512431 IGHV4-38-2P0DP08 117 aa10.6□□□□□ -0.71
DDX41-215ENST00000512431 APLNRP35414 380 aa10.6□□□□□ -0.71
DDX41-215ENST00000512431 CRATP43155 626 aa10.6□□□□□ -0.71
DDX41-215ENST00000512431 HOXC5Q00444 222 aa10.6□□□□□ -0.71
DDX41-215ENST00000512431 PUDPQ08623 228 aa10.6□□□□□ -0.71
DDX41-215ENST00000512431 HLXQ14774 488 aaPredicted RBP10.6□□□□□ -0.71
DDX41-215ENST00000512431 TMEM155Q4W5P6 130 aa10.6□□□□□ -0.71
DDX41-215ENST00000512431 ZMAT1Q5H9K5 638 aa10.6□□□□□ -0.71
DDX41-215ENST00000512431 ASPHD2Q6ICH7 369 aa10.6□□□□□ -0.71
DDX41-215ENST00000512431 FIP1L1Q6UN15 594 aaKnown RBP10.6□□□□□ -0.71
DDX41-215ENST00000512431 C6orf89Q6UWU4 347 aa10.6□□□□□ -0.71
DDX41-215ENST00000512431 RHOUQ7L0Q8 258 aa10.6□□□□□ -0.71
DDX41-215ENST00000512431 SCAIQ8N9R8 606 aa10.6□□□□□ -0.71
DDX41-215ENST00000512431 OR6S1Q8NH40 331 aa10.6□□□□□ -0.71
DDX41-215ENST00000512431 DNAJA4Q8WW22 397 aaPredicted RBP10.6□□□□□ -0.71
DDX41-215ENST00000512431 SLC35B4Q969S0 331 aa10.6□□□□□ -0.71
DDX41-215ENST00000512431 EPYCQ99645 322 aa10.6□□□□□ -0.71
DDX41-215ENST00000512431 RSPO3Q9BXY4 272 aaPredicted RBP10.6□□□□□ -0.71
DDX41-215ENST00000512431 SLC19A3Q9BZV2 496 aa10.6□□□□□ -0.71
DDX41-215ENST00000512431 NANOGQ9H9S0 305 aa10.6□□□□□ -0.71
DDX41-215ENST00000512431 NPHS2Q9NP85 383 aa10.6□□□□□ -0.71
DDX41-215ENST00000512431 TCF7L2Q9NQB0 619 aa10.6□□□□□ -0.71
DDX41-215ENST00000512431 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.6□□□□□ -0.71
DDX41-215ENST00000512431 GLTPQ9NZD2 209 aa10.6□□□□□ -0.71
DDX41-215ENST00000512431 KLHL14Q9P2G3 628 aa10.6□□□□□ -0.71
DDX41-215ENST00000512431 EIF3KQ9UBQ5 218 aaKnown RBP10.6□□□□□ -0.71
DDX41-215ENST00000512431 IL20RAQ9UHF4 553 aa10.6□□□□□ -0.71
DDX41-215ENST00000512431 WNK2Q9Y3S1 2297 aa10.6□□□□□ -0.71
DDX41-215ENST00000512431 SLC22A31A6NKX4 558 aa10.59□□□□□ -0.71
DDX41-215ENST00000512431 SRRM5B3KS81 715 aa10.59□□□□□ -0.71
DDX41-215ENST00000512431 ZNF500O60304 480 aaPredicted RBP10.59□□□□□ -0.71
DDX41-215ENST00000512431 ERLIN1O75477 346 aa10.59□□□□□ -0.71
DDX41-215ENST00000512431 MFN2O95140 757 aa10.59□□□□□ -0.71
DDX41-215ENST00000512431 IGHV2-70P01814 119 aa10.59□□□□□ -0.71
DDX41-215ENST00000512431 CCNOP22674 350 aa10.59□□□□□ -0.71
DDX41-215ENST00000512431 MMP15P51511 669 aa10.59□□□□□ -0.71
DDX41-215ENST00000512431 BIDP55957 195 aa10.59□□□□□ -0.71
DDX41-215ENST00000512431 PAX8Q06710 450 aa10.59□□□□□ -0.71
DDX41-215ENST00000512431 ALG10BQ5I7T1 473 aa10.59□□□□□ -0.71
DDX41-215ENST00000512431 LRRN1Q6UXK5 716 aa10.59□□□□□ -0.71
DDX41-215ENST00000512431 SLC16A14Q7RTX9 510 aa10.59□□□□□ -0.71
DDX41-215ENST00000512431 PXKQ7Z7A4 578 aa10.59□□□□□ -0.71
DDX41-215ENST00000512431 C10orf53Q8N6V4 93 aa10.59□□□□□ -0.71
DDX41-215ENST00000512431 RBM15BQ8NDT2 890 aaKnown RBP10.59□□□□□ -0.71
DDX41-215ENST00000512431 ANP32BQ92688 251 aaKnown RBP10.59□□□□□ -0.71
DDX41-215ENST00000512431 SLC41A3Q96GZ6 507 aa10.59□□□□□ -0.71
DDX41-215ENST00000512431 APOPT1Q96IL0 206 aa10.59□□□□□ -0.71
DDX41-215ENST00000512431 OR52E6Q96RD3 313 aa10.59□□□□□ -0.71
DDX41-215ENST00000512431 TMEM38BQ9NVV0 291 aa10.59□□□□□ -0.71
DDX41-215ENST00000512431 C1RLQ9NZP8 487 aa10.59□□□□□ -0.71
DDX41-215ENST00000512431 CGGBP1Q9UFW8 167 aaPredicted RBP10.59□□□□□ -0.71
DDX41-215ENST00000512431 RNF114Q9Y508 228 aa10.59□□□□□ -0.71
DDX41-215ENST00000512431 TRAV40A0A0B4J280 105 aa10.58□□□□□ -0.72
DDX41-215ENST00000512431 MDFIC2A0A1B0GVS7 189 aa10.58□□□□□ -0.72
DDX41-215ENST00000512431 A8MXK9 166 aa10.58□□□□□ -0.72
DDX41-215ENST00000512431 PIN1P1O15428 100 aa10.58□□□□□ -0.72
DDX41-215ENST00000512431 OR6A2O95222 327 aa10.58□□□□□ -0.72
DDX41-215ENST00000512431 TGDSO95455 350 aa10.58□□□□□ -0.72
DDX41-215ENST00000512431 PLATP00750 562 aa10.58□□□□□ -0.72
DDX41-215ENST00000512431 SHBGP04278 402 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms