RNA–Protein interactions for RNA: ENST00000493829.5

USP39-218, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 1,660 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-218ENST00000493829 IGKV1D-43A0A0B4J1Z2 117 aa17.14■□□□□ 0.33
USP39-218ENST00000493829 DCTN6O00399 190 aa17.14■□□□□ 0.33
USP39-218ENST00000493829 SLC16A7O60669 478 aa17.14■□□□□ 0.33
USP39-218ENST00000493829 ENTPD6O75354 484 aa17.14■□□□□ 0.33
USP39-218ENST00000493829 WBP4O75554 376 aaKnown RBP17.14■□□□□ 0.33
USP39-218ENST00000493829 CTLA4P16410 223 aa17.14■□□□□ 0.33
USP39-218ENST00000493829 KIR2DL2P43627 348 aaPredicted RBP17.14■□□□□ 0.33
USP39-218ENST00000493829 CENPAP49450 140 aa17.14■□□□□ 0.33
USP39-218ENST00000493829 EFNB1P98172 346 aa17.14■□□□□ 0.33
USP39-218ENST00000493829 MED21Q13503 144 aa17.14■□□□□ 0.33
USP39-218ENST00000493829 GUSBP1Q15486 140 aa17.14■□□□□ 0.33
USP39-218ENST00000493829 B3GLCTQ6Y288 498 aa17.14■□□□□ 0.33
USP39-218ENST00000493829 UBE2J2Q8N2K1 259 aa17.14■□□□□ 0.33
USP39-218ENST00000493829 RHOXF1Q8NHV9 184 aa17.14■□□□□ 0.33
USP39-218ENST00000493829 ZNF582Q96NG8 517 aaPredicted RBP17.14■□□□□ 0.33
USP39-218ENST00000493829 SLCO5A1Q9H2Y9 848 aa17.14■□□□□ 0.33
USP39-218ENST00000493829 GP6Q9HCN6 339 aa17.14■□□□□ 0.33
USP39-218ENST00000493829 VSX1Q9NZR4 365 aaPredicted RBP17.14■□□□□ 0.33
USP39-218ENST00000493829 PRSS50Q9UI38 385 aa17.14■□□□□ 0.33
USP39-218ENST00000493829 CCL21O00585 134 aa17.13■□□□□ 0.33
USP39-218ENST00000493829 SMNDC1O75940 238 aaKnown RBP eCLIP17.13■□□□□ 0.33
USP39-218ENST00000493829 KRT33AO76009 404 aa17.13■□□□□ 0.33
USP39-218ENST00000493829 GPANK1O95872 356 aa17.13■□□□□ 0.33
USP39-218ENST00000493829 SPI1P17947 270 aa17.13■□□□□ 0.33
USP39-218ENST00000493829 TIMP3P35625 211 aa17.13■□□□□ 0.33
USP39-218ENST00000493829 SNRPGP62308 76 aaKnown RBP17.13■□□□□ 0.33
USP39-218ENST00000493829 APOFQ13790 326 aa17.13■□□□□ 0.33
USP39-218ENST00000493829 ETFDHQ16134 617 aa17.13■□□□□ 0.33
USP39-218ENST00000493829 EIF2S3LQ2VIR3 472 aaKnown RBP17.13■□□□□ 0.33
USP39-218ENST00000493829 TSPO2Q5TGU0 170 aa17.13■□□□□ 0.33
USP39-218ENST00000493829 OTPQ5XKR4 325 aa17.13■□□□□ 0.33
USP39-218ENST00000493829 C20orf196Q8IYI0 205 aa17.13■□□□□ 0.33
USP39-218ENST00000493829 GPR137CQ8N3F9 429 aa17.13■□□□□ 0.33
USP39-218ENST00000493829 PROKR2Q8NFJ6 384 aa17.13■□□□□ 0.33
USP39-218ENST00000493829 PRR7Q8TB68 274 aa17.13■□□□□ 0.33
USP39-218ENST00000493829 ZNRF4Q8WWF5 429 aa17.13■□□□□ 0.33
USP39-218ENST00000493829 TRUB1Q8WWH5 349 aaKnown RBP17.13■□□□□ 0.33
USP39-218ENST00000493829 PTP4A1Q93096 173 aa17.13■□□□□ 0.33
USP39-218ENST00000493829 DDOQ99489 341 aa17.13■□□□□ 0.33
USP39-218ENST00000493829 ALG12Q9BV10 488 aa17.13■□□□□ 0.33
USP39-218ENST00000493829 ULBP2Q9BZM5 246 aa17.13■□□□□ 0.33
USP39-218ENST00000493829 PARPBPQ9NWS1 579 aa17.13■□□□□ 0.33
USP39-218ENST00000493829 CLN6Q9NWW5 311 aa17.13■□□□□ 0.33
USP39-218ENST00000493829 GLTPQ9NZD2 209 aa17.13■□□□□ 0.33
USP39-218ENST00000493829 MEMO1Q9Y316 297 aa17.13■□□□□ 0.33
USP39-218ENST00000493829 RP1L1Q8IWN7 2480 aaPredicted RBP17.13■□□□□ 0.33
USP39-218ENST00000493829 A0A0G2JNJ9 132 aa17.13■□□□□ 0.33
USP39-218ENST00000493829 MPZL2O60487 215 aa17.13■□□□□ 0.33
USP39-218ENST00000493829 TNFSF13O75888 250 aa17.13■□□□□ 0.33
USP39-218ENST00000493829 QDPRP09417 244 aa17.13■□□□□ 0.33
USP39-218ENST00000493829 CDK5R2Q13319 367 aa17.13■□□□□ 0.33
USP39-218ENST00000493829 C9orf135Q5VTT2 229 aa17.13■□□□□ 0.33
USP39-218ENST00000493829 LINGO2Q7L985 606 aa17.13■□□□□ 0.33
USP39-218ENST00000493829 ZSCAN2Q7Z7L9 614 aaPredicted RBP17.13■□□□□ 0.33
USP39-218ENST00000493829 FJX1Q86VR8 437 aa17.13■□□□□ 0.33
USP39-218ENST00000493829 OR6V1Q8N148 313 aa17.13■□□□□ 0.33
USP39-218ENST00000493829 FAM26EQ8N5C1 309 aa17.13■□□□□ 0.33
USP39-218ENST00000493829 OR6K6Q8NGW6 343 aa17.13■□□□□ 0.33
USP39-218ENST00000493829 HTRA1Q92743 480 aa17.13■□□□□ 0.33
USP39-218ENST00000493829 TMEM54Q969K7 222 aa17.13■□□□□ 0.33
USP39-218ENST00000493829 AMBNQ9NP70 447 aa17.13■□□□□ 0.33
USP39-218ENST00000493829 SLC7A10Q9NS82 523 aa17.13■□□□□ 0.33
USP39-218ENST00000493829 Q9UFV3 132 aa17.13■□□□□ 0.33
USP39-218ENST00000493829 FOXD3Q9UJU5 478 aaPredicted RBP17.13■□□□□ 0.33
USP39-218ENST00000493829 HSPE1-MOB4S4R3N1 261 aa17.13■□□□□ 0.33
USP39-218ENST00000493829 E9PLN8 166 aa17.12■□□□□ 0.33
USP39-218ENST00000493829 STSP08842 583 aa17.12■□□□□ 0.33
USP39-218ENST00000493829 CEACAM8P31997 349 aaPredicted RBP17.12■□□□□ 0.33
USP39-218ENST00000493829 CDH11P55287 796 aa17.12■□□□□ 0.33
USP39-218ENST00000493829 AADACL4Q5VUY2 407 aa17.12■□□□□ 0.33
USP39-218ENST00000493829 LAIR2Q6ISS4 152 aa17.12■□□□□ 0.33
USP39-218ENST00000493829 LYPD4Q6UWN0 246 aa17.12■□□□□ 0.33
USP39-218ENST00000493829 BTLAQ7Z6A9 289 aa17.12■□□□□ 0.33
USP39-218ENST00000493829 ZNF786Q8N393 782 aa17.12■□□□□ 0.33
USP39-218ENST00000493829 GALNT11Q8NCW6 608 aa17.12■□□□□ 0.33
USP39-218ENST00000493829 OR6K3Q8NGY3 331 aa17.12■□□□□ 0.33
USP39-218ENST00000493829 MCHR2Q969V1 340 aa17.12■□□□□ 0.33
USP39-218ENST00000493829 RBP7Q96R05 134 aa17.12■□□□□ 0.33
USP39-218ENST00000493829 VKORC1Q9BQB6 163 aa17.12■□□□□ 0.33
USP39-218ENST00000493829 NMNAT2Q9BZQ4 307 aa17.12■□□□□ 0.33
USP39-218ENST00000493829 H2AFY2Q9P0M6 372 aaPredicted RBP17.12■□□□□ 0.33
USP39-218ENST00000493829 PHF3Q92576 2039 aaKnown RBP17.11■□□□□ 0.33
USP39-218ENST00000493829 A0A1W2PPL8 197 aa17.11■□□□□ 0.33
USP39-218ENST00000493829 SEC14L2O76054 403 aa17.11■□□□□ 0.33
USP39-218ENST00000493829 APOL3O95236 402 aa17.11■□□□□ 0.33
USP39-218ENST00000493829 OR3A2P47893 321 aa17.11■□□□□ 0.33
USP39-218ENST00000493829 NXNL2Q5VZ03 156 aa17.11■□□□□ 0.33
USP39-218ENST00000493829 LRFN4Q6PJG9 635 aa17.11■□□□□ 0.33
USP39-218ENST00000493829 TFAP2EQ6VUC0 442 aa17.11■□□□□ 0.33
USP39-218ENST00000493829 OR2T4Q8NH00 348 aa17.11■□□□□ 0.33
USP39-218ENST00000493829 NMD3Q96D46 503 aaKnown RBP17.11■□□□□ 0.33
USP39-218ENST00000493829 ZMYND19Q96E35 227 aaPredicted RBP17.11■□□□□ 0.33
USP39-218ENST00000493829 ZNF837Q96EG3 531 aaPredicted RBP17.11■□□□□ 0.33
USP39-218ENST00000493829 SNX18Q96RF0 628 aa17.11■□□□□ 0.33
USP39-218ENST00000493829 DMRTA2Q96SC8 542 aa17.11■□□□□ 0.33
USP39-218ENST00000493829 RHNO1Q9BSD3 238 aa17.11■□□□□ 0.33
USP39-218ENST00000493829 OPN3Q9H1Y3 402 aaPredicted RBP17.11■□□□□ 0.33
USP39-218ENST00000493829 CRLF2Q9HC73 371 aa17.11■□□□□ 0.33
USP39-218ENST00000493829 UPB1Q9UBR1 384 aa17.11■□□□□ 0.33
USP39-218ENST00000493829 LRCH1Q9Y2L9 728 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 141.7 ms