RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 FUT7Q11130 342 aa3.04□□□□□ -1.92
ECHDC1-217ENST00000488087 CHI3L2Q15782 390 aa3.04□□□□□ -1.92
ECHDC1-217ENST00000488087 GRK1Q15835 563 aa3.04□□□□□ -1.92
ECHDC1-217ENST00000488087 AANATQ16613 207 aa3.04□□□□□ -1.92
ECHDC1-217ENST00000488087 NRF1Q16656 503 aa3.04□□□□□ -1.92
ECHDC1-217ENST00000488087 MICAQ29983 383 aa3.04□□□□□ -1.92
ECHDC1-217ENST00000488087 HKDC1Q2TB90 917 aa3.04□□□□□ -1.92
ECHDC1-217ENST00000488087 C15orf32Q32M92 178 aa3.04□□□□□ -1.92
ECHDC1-217ENST00000488087 ZNF404Q494X3 552 aa3.04□□□□□ -1.92
ECHDC1-217ENST00000488087 EIPR1Q53HC9 387 aa3.04□□□□□ -1.92
ECHDC1-217ENST00000488087 CYBRD1Q53TN4 286 aa3.04□□□□□ -1.92
ECHDC1-217ENST00000488087 PAGE2BQ5JRK9 111 aa3.04□□□□□ -1.92
ECHDC1-217ENST00000488087 SAMD4BQ5PRF9 694 aaKnown RBP3.04□□□□□ -1.92
ECHDC1-217ENST00000488087 SYT6Q5T7P8 510 aaPredicted RBP3.04□□□□□ -1.92
ECHDC1-217ENST00000488087 TTC23Q5W5X9 447 aa3.04□□□□□ -1.92
ECHDC1-217ENST00000488087 SEL1L3Q68CR1 1132 aa3.04□□□□□ -1.92
ECHDC1-217ENST00000488087 RAET1GQ6H3X3 334 aa3.04□□□□□ -1.92
ECHDC1-217ENST00000488087 FAM45BPQ6NSW5 357 aa3.04□□□□□ -1.92
ECHDC1-217ENST00000488087 CEACAM19Q7Z692 300 aa3.04□□□□□ -1.92
ECHDC1-217ENST00000488087 ZNF679Q8IYX0 411 aa3.04□□□□□ -1.92
ECHDC1-217ENST00000488087 RDH10Q8IZV5 341 aa3.04□□□□□ -1.92
ECHDC1-217ENST00000488087 PYROXD2Q8N2H3 581 aa3.04□□□□□ -1.92
ECHDC1-217ENST00000488087 DHRSXQ8N5I4 330 aa3.04□□□□□ -1.92
ECHDC1-217ENST00000488087 RNF148Q8N7C7 305 aa3.04□□□□□ -1.92
ECHDC1-217ENST00000488087 RELL2Q8NC24 303 aaPredicted RBP3.04□□□□□ -1.92
ECHDC1-217ENST00000488087 CHDHQ8NE62 594 aaPredicted RBP3.04□□□□□ -1.92
ECHDC1-217ENST00000488087 FAM71CQ8NEG0 241 aa3.04□□□□□ -1.92
ECHDC1-217ENST00000488087 OR4M2Q8NGB6 313 aa3.04□□□□□ -1.92
ECHDC1-217ENST00000488087 OR4M1Q8NGD0 313 aa3.04□□□□□ -1.92
ECHDC1-217ENST00000488087 OR6C4Q8NGE1 309 aa3.04□□□□□ -1.92
ECHDC1-217ENST00000488087 OR56B1Q8NGI3 324 aa3.04□□□□□ -1.92
ECHDC1-217ENST00000488087 FAM45AQ8TCE6 357 aa3.04□□□□□ -1.92
ECHDC1-217ENST00000488087 DEDD2Q8WXF8 326 aa3.04□□□□□ -1.92
ECHDC1-217ENST00000488087 PHYHIPQ92561 330 aa3.04□□□□□ -1.92
ECHDC1-217ENST00000488087 POP5Q969H6 163 aaKnown RBP3.04□□□□□ -1.92
ECHDC1-217ENST00000488087 CCDC124Q96CT7 223 aaKnown RBP3.04□□□□□ -1.92
ECHDC1-217ENST00000488087 TUBGCP3Q96CW5 907 aa3.04□□□□□ -1.92
ECHDC1-217ENST00000488087 ZHX1-C8orf76Q96EF9 292 aa3.04□□□□□ -1.92
ECHDC1-217ENST00000488087 CENPNQ96H22 339 aaPredicted RBP3.04□□□□□ -1.92
ECHDC1-217ENST00000488087 ELMO2Q96JJ3 720 aa3.04□□□□□ -1.92
ECHDC1-217ENST00000488087 SERAC1Q96JX3 654 aa3.04□□□□□ -1.92
ECHDC1-217ENST00000488087 PPP3R2Q96LZ3 170 aa3.04□□□□□ -1.92
ECHDC1-217ENST00000488087 HYLS1Q96M11 299 aa3.04□□□□□ -1.92
ECHDC1-217ENST00000488087 ACCSQ96QU6 501 aa3.04□□□□□ -1.92
ECHDC1-217ENST00000488087 RIT2Q99578 217 aa3.04□□□□□ -1.92
ECHDC1-217ENST00000488087 C12orf57Q99622 126 aa3.04□□□□□ -1.92
ECHDC1-217ENST00000488087 EBF4Q9BQW3 602 aa3.04□□□□□ -1.92
ECHDC1-217ENST00000488087 ROGDIQ9GZN7 287 aa3.04□□□□□ -1.92
ECHDC1-217ENST00000488087 POLR1EQ9GZS1 481 aaKnown RBP3.04□□□□□ -1.92
ECHDC1-217ENST00000488087 TMEM117Q9H0C3 514 aa3.04□□□□□ -1.92
ECHDC1-217ENST00000488087 TRIM45Q9H8W5 580 aaPredicted RBP3.04□□□□□ -1.92
ECHDC1-217ENST00000488087 Q9HAA7 133 aa3.04□□□□□ -1.92
ECHDC1-217ENST00000488087 AGPAT4Q9NRZ5 378 aa3.04□□□□□ -1.92
ECHDC1-217ENST00000488087 GLRX2Q9NS18 164 aa3.04□□□□□ -1.92
ECHDC1-217ENST00000488087 ABCC13Q9NSE7 274 aa3.04□□□□□ -1.92
ECHDC1-217ENST00000488087 TAS2R16Q9NYV7 291 aa3.04□□□□□ -1.92
ECHDC1-217ENST00000488087 TAS2R9Q9NYW1 312 aa3.04□□□□□ -1.92
ECHDC1-217ENST00000488087 BFARQ9NZS9 450 aa3.04□□□□□ -1.92
ECHDC1-217ENST00000488087 SEC14L4Q9UDX3 406 aa3.04□□□□□ -1.92
ECHDC1-217ENST00000488087 CD300AQ9UGN4 299 aa3.04□□□□□ -1.92
ECHDC1-217ENST00000488087 KIF25Q9UIL4 384 aa3.04□□□□□ -1.92
ECHDC1-217ENST00000488087 COPS3Q9UNS2 423 aa3.04□□□□□ -1.92
ECHDC1-217ENST00000488087 CBY1Q9Y3M2 126 aa3.04□□□□□ -1.92
ECHDC1-217ENST00000488087 U3KQV3 271 aa3.04□□□□□ -1.92
ECHDC1-217ENST00000488087 PXDNQ92626 1479 aa3.03□□□□□ -1.92
ECHDC1-217ENST00000488087 PTPRFP10586 1907 aa3.03□□□□□ -1.92
ECHDC1-217ENST00000488087 TANC1Q9C0D5 1861 aa3.03□□□□□ -1.92
ECHDC1-217ENST00000488087 GON4LQ3T8J9 2241 aa3.03□□□□□ -1.92
ECHDC1-217ENST00000488087 SIPA1L3O60292 1781 aaPredicted RBP3.03□□□□□ -1.92
ECHDC1-217ENST00000488087 SIGLEC1Q9BZZ2 1709 aa3.03□□□□□ -1.92
ECHDC1-217ENST00000488087 A0A075B6Q4 140 aa3.03□□□□□ -1.92
ECHDC1-217ENST00000488087 A0A087WZY1 265 aa3.03□□□□□ -1.92
ECHDC1-217ENST00000488087 XKRY2A2RUG3 117 aa3.03□□□□□ -1.92
ECHDC1-217ENST00000488087 TMEM89A2RUT3 159 aa3.03□□□□□ -1.92
ECHDC1-217ENST00000488087 PCP4L1A6NKN8 68 aa3.03□□□□□ -1.92
ECHDC1-217ENST00000488087 C2orf74A8MZ97 194 aa3.03□□□□□ -1.92
ECHDC1-217ENST00000488087 HACD1B0YJ81 288 aa3.03□□□□□ -1.92
ECHDC1-217ENST00000488087 K7ERI5 159 aa3.03□□□□□ -1.92
ECHDC1-217ENST00000488087 SGK1O00141 431 aa3.03□□□□□ -1.92
ECHDC1-217ENST00000488087 CLDN3O15551 220 aa3.03□□□□□ -1.92
ECHDC1-217ENST00000488087 EIF1BO60739 113 aaKnown RBP3.03□□□□□ -1.92
ECHDC1-217ENST00000488087 NIPSNAP2O75323 286 aa3.03□□□□□ -1.92
ECHDC1-217ENST00000488087 OR2B3O76000 313 aa3.03□□□□□ -1.92
ECHDC1-217ENST00000488087 VAPBO95292 243 aa3.03□□□□□ -1.92
ECHDC1-217ENST00000488087 RENP00797 406 aa3.03□□□□□ -1.92
ECHDC1-217ENST00000488087 S100A8P05109 93 aa3.03□□□□□ -1.92
ECHDC1-217ENST00000488087 ASGR1P07306 291 aa3.03□□□□□ -1.92
ECHDC1-217ENST00000488087 HCKP08631 526 aa3.03□□□□□ -1.92
ECHDC1-217ENST00000488087 FCGR3AP08637 254 aa3.03□□□□□ -1.92
ECHDC1-217ENST00000488087 HBQ1P09105 142 aa3.03□□□□□ -1.92
ECHDC1-217ENST00000488087 UQCRFS1P1P0C7P4 283 aa3.03□□□□□ -1.92
ECHDC1-217ENST00000488087 SPNP16150 400 aa3.03□□□□□ -1.92
ECHDC1-217ENST00000488087 TNNI3P19429 210 aa3.03□□□□□ -1.92
ECHDC1-217ENST00000488087 DRD5P21918 477 aa3.03□□□□□ -1.92
ECHDC1-217ENST00000488087 HNRNPA2B1P22626 353 aaKnown RBP3.03□□□□□ -1.92
ECHDC1-217ENST00000488087 CPN2P22792 545 aa3.03□□□□□ -1.92
ECHDC1-217ENST00000488087 FASP25445 335 aa3.03□□□□□ -1.92
ECHDC1-217ENST00000488087 S100PP25815 95 aa3.03□□□□□ -1.92
ECHDC1-217ENST00000488087 PTBP1P26599 531 aaKnown RBP eCLIP3.03□□□□□ -1.92
ECHDC1-217ENST00000488087 EPHX2P34913 555 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms