RNA–Protein interactions for RNA: ENST00000461507.5

FDPS-204, Transcript of farnesyl diphosphate synthase, human

TSL 2

Gene FDPS, Length 1,022 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FDPS-204	ENST00000461507	C1orf162	Q8NEQ5	155 aa	Predicted RBP	11.11	□□□□□ -0.63
FDPS-204	ENST00000461507	OR4K5	Q8NGD3	323 aa		11.11	□□□□□ -0.63
FDPS-204	ENST00000461507	SLC7A13	Q8TCU3	470 aa		11.11	□□□□□ -0.63
FDPS-204	ENST00000461507	RADIL	Q96JH8	1075 aa		11.11	□□□□□ -0.63
FDPS-204	ENST00000461507	ZNF347	Q96SE7	839 aa		11.11	□□□□□ -0.63
FDPS-204	ENST00000461507	KCNS3	Q9BQ31	491 aa		11.11	□□□□□ -0.63
FDPS-204	ENST00000461507	ANKRD19P	Q9H560	264 aa		11.11	□□□□□ -0.63
FDPS-204	ENST00000461507	SLC25A15	Q9Y619	301 aa		11.11	□□□□□ -0.63
FDPS-204	ENST00000461507	CHD3	Q12873	2000 aa	Known RBP	11.1	□□□□□ -0.63
FDPS-204	ENST00000461507		A0A1W2PRQ8	180 aa		11.1	□□□□□ -0.63
FDPS-204	ENST00000461507	ABCD4	O14678	606 aa		11.1	□□□□□ -0.63
FDPS-204	ENST00000461507	CD8A	P01732	235 aa		11.1	□□□□□ -0.63
FDPS-204	ENST00000461507	IGHV4-39	P01824	125 aa		11.1	□□□□□ -0.63
FDPS-204	ENST00000461507	CD79A	P11912	226 aa		11.1	□□□□□ -0.63
FDPS-204	ENST00000461507	B4GALT1	P15291	398 aa		11.1	□□□□□ -0.63
FDPS-204	ENST00000461507	SLC9A3	P48764	834 aa		11.1	□□□□□ -0.63
FDPS-204	ENST00000461507	CDH11	P55287	796 aa		11.1	□□□□□ -0.63
FDPS-204	ENST00000461507	NPRL3	Q12980	569 aa		11.1	□□□□□ -0.63
FDPS-204	ENST00000461507	TNK1	Q13470	666 aa		11.1	□□□□□ -0.63
FDPS-204	ENST00000461507	DGCR6	Q14129	220 aa		11.1	□□□□□ -0.63
FDPS-204	ENST00000461507	CLEC12B	Q2HXU8	276 aa		11.1	□□□□□ -0.63
FDPS-204	ENST00000461507	ANKRD16	Q6P6B7	361 aa		11.1	□□□□□ -0.63
FDPS-204	ENST00000461507	ZNF813	Q6ZN06	617 aa		11.1	□□□□□ -0.63
FDPS-204	ENST00000461507	NOXO1	Q8NFA2	376 aa		11.1	□□□□□ -0.63
FDPS-204	ENST00000461507	OR6X1	Q8NH79	312 aa		11.1	□□□□□ -0.63
FDPS-204	ENST00000461507	TRMT61A	Q96FX7	289 aa	Known RBP	11.1	□□□□□ -0.63
FDPS-204	ENST00000461507	BOD1	Q96IK1	185 aa		11.1	□□□□□ -0.63
FDPS-204	ENST00000461507	MUS81	Q96NY9	551 aa		11.1	□□□□□ -0.63
FDPS-204	ENST00000461507	TNFRSF13C	Q96RJ3	184 aa		11.1	□□□□□ -0.63
FDPS-204	ENST00000461507	IL1RAP	Q9NPH3	570 aa		11.1	□□□□□ -0.63
FDPS-204	ENST00000461507	GLTP	Q9NZD2	209 aa		11.1	□□□□□ -0.63
FDPS-204	ENST00000461507	MGAT4B	Q9UQ53	548 aa		11.1	□□□□□ -0.63
FDPS-204	ENST00000461507	HTR3E	A5X5Y0	456 aa		11.09	□□□□□ -0.63
FDPS-204	ENST00000461507	UNC119B	A6NIH7	251 aa		11.09	□□□□□ -0.63
FDPS-204	ENST00000461507	ZNF99	A8MXY4	864 aa	Predicted RBP	11.09	□□□□□ -0.63
FDPS-204	ENST00000461507	TNFRSF11B	O00300	401 aa		11.09	□□□□□ -0.63
FDPS-204	ENST00000461507	GNGT2	O14610	69 aa		11.09	□□□□□ -0.63
FDPS-204	ENST00000461507	CDC42EP2	O14613	210 aa		11.09	□□□□□ -0.63
FDPS-204	ENST00000461507	IGF2	P01344	180 aa		11.09	□□□□□ -0.63
FDPS-204	ENST00000461507	SEMG1	P04279	462 aa		11.09	□□□□□ -0.63
FDPS-204	ENST00000461507	ACVR1B	P36896	505 aa		11.09	□□□□□ -0.63
FDPS-204	ENST00000461507	IFNGR2	P38484	337 aa		11.09	□□□□□ -0.63
FDPS-204	ENST00000461507	CDKN1A	P38936	164 aa		11.09	□□□□□ -0.63
FDPS-204	ENST00000461507	SEC23B	Q15437	767 aa		11.09	□□□□□ -0.63
FDPS-204	ENST00000461507	ZBED5	Q49AG3	693 aa		11.09	□□□□□ -0.63
FDPS-204	ENST00000461507	C11orf71	Q6IPW1	123 aa		11.09	□□□□□ -0.63
FDPS-204	ENST00000461507	SLC22A25	Q6T423	547 aa		11.09	□□□□□ -0.63
FDPS-204	ENST00000461507	PRIMA1	Q86XR5	153 aa		11.09	□□□□□ -0.63
FDPS-204	ENST00000461507	WDFY1	Q8IWB7	410 aa		11.09	□□□□□ -0.63
FDPS-204	ENST00000461507	DEPDC4	Q8N2C3	294 aa		11.09	□□□□□ -0.63
FDPS-204	ENST00000461507	FANK1	Q8TC84	345 aa		11.09	□□□□□ -0.63
FDPS-204	ENST00000461507	ASB10	Q8WXI3	467 aa		11.09	□□□□□ -0.63
FDPS-204	ENST00000461507	NANOS1	Q8WY41	292 aa	Known RBP	11.09	□□□□□ -0.63
FDPS-204	ENST00000461507	GTPBP3	Q969Y2	492 aa	Known RBP	11.09	□□□□□ -0.63
FDPS-204	ENST00000461507	SLC7A6OS	Q96CW6	309 aa	Predicted RBP	11.09	□□□□□ -0.63
FDPS-204	ENST00000461507	ZNF837	Q96EG3	531 aa	Predicted RBP	11.09	□□□□□ -0.63
FDPS-204	ENST00000461507	SLC25A44	Q96H78	314 aa	Predicted RBP	11.09	□□□□□ -0.63
FDPS-204	ENST00000461507	RSRC1	Q96IZ7	334 aa	Known RBP	11.09	□□□□□ -0.63
FDPS-204	ENST00000461507	FAIM	Q9NVQ4	179 aa		11.09	□□□□□ -0.63
FDPS-204	ENST00000461507	CISD1	Q9NZ45	108 aa	Known RBP	11.09	□□□□□ -0.63
FDPS-204	ENST00000461507	STX18	Q9P2W9	335 aa	Known RBP	11.09	□□□□□ -0.63
FDPS-204	ENST00000461507	IL20RA	Q9UHF4	553 aa		11.09	□□□□□ -0.63
FDPS-204	ENST00000461507	HIF3A	Q9Y2N7	669 aa		11.09	□□□□□ -0.63
FDPS-204	ENST00000461507	HEATR1	Q9H583	2144 aa	Known RBP	11.08	□□□□□ -0.64
FDPS-204	ENST00000461507	TCRBV5S2	A0A599	114 aa		11.08	□□□□□ -0.64
FDPS-204	ENST00000461507	DHRS12	A0PJE2	317 aa		11.08	□□□□□ -0.64
FDPS-204	ENST00000461507	SH3PXD2B	A1X283	911 aa		11.08	□□□□□ -0.64
FDPS-204	ENST00000461507	INAFM1	C9JVW0	142 aa		11.08	□□□□□ -0.64
FDPS-204	ENST00000461507	XKRY	O14609	159 aa		11.08	□□□□□ -0.64
FDPS-204	ENST00000461507	TRMU	O75648	421 aa	Known RBP	11.08	□□□□□ -0.64
FDPS-204	ENST00000461507	ATP5H	O75947	161 aa		11.08	□□□□□ -0.64
FDPS-204	ENST00000461507	QDPR	P09417	244 aa		11.08	□□□□□ -0.64
FDPS-204	ENST00000461507	ACADS	P16219	412 aa		11.08	□□□□□ -0.64
FDPS-204	ENST00000461507	PTAFR	P25105	342 aa		11.08	□□□□□ -0.64
FDPS-204	ENST00000461507	CD40	P25942	277 aa		11.08	□□□□□ -0.64
FDPS-204	ENST00000461507	ZNF84	P51523	738 aa		11.08	□□□□□ -0.64
FDPS-204	ENST00000461507	ERVK-25	P63136	954 aa		11.08	□□□□□ -0.64
FDPS-204	ENST00000461507	CBX1	P83916	185 aa		11.08	□□□□□ -0.64
FDPS-204	ENST00000461507	SPOCK1	Q08629	439 aa		11.08	□□□□□ -0.64
FDPS-204	ENST00000461507	TRAP1	Q12931	704 aa	Known RBP	11.08	□□□□□ -0.64
FDPS-204	ENST00000461507	PPP1R8	Q12972	351 aa	Known RBP	11.08	□□□□□ -0.64
FDPS-204	ENST00000461507	BNIP1	Q12981	228 aa		11.08	□□□□□ -0.64
FDPS-204	ENST00000461507	CCDC121	Q6ZUS5	278 aa		11.08	□□□□□ -0.64
FDPS-204	ENST00000461507	WDR31	Q8NA23	367 aa		11.08	□□□□□ -0.64
FDPS-204	ENST00000461507	NSMAF	Q92636	917 aa		11.08	□□□□□ -0.64
FDPS-204	ENST00000461507	BCL2L2	Q92843	193 aa	Predicted RBP	11.08	□□□□□ -0.64
FDPS-204	ENST00000461507	LRR1	Q96L50	414 aa		11.08	□□□□□ -0.64
FDPS-204	ENST00000461507	ZNF570	Q96NI8	536 aa		11.08	□□□□□ -0.64
FDPS-204	ENST00000461507	FOXB1	Q99853	325 aa		11.08	□□□□□ -0.64
FDPS-204	ENST00000461507	KATNB1	Q9BVA0	655 aa		11.08	□□□□□ -0.64
FDPS-204	ENST00000461507	RERGL	Q9H628	205 aa		11.08	□□□□□ -0.64
FDPS-204	ENST00000461507	MAGIX	Q9H6Y5	334 aa		11.08	□□□□□ -0.64
FDPS-204	ENST00000461507	REEP1	Q9H902	201 aa		11.08	□□□□□ -0.64
FDPS-204	ENST00000461507	BARX1	Q9HBU1	254 aa	Predicted RBP	11.08	□□□□□ -0.64
FDPS-204	ENST00000461507	GRHPR	Q9UBQ7	328 aa		11.08	□□□□□ -0.64
FDPS-204	ENST00000461507	ZNF346	Q9UL40	294 aa	Known RBP	11.08	□□□□□ -0.64
FDPS-204	ENST00000461507	SAMHD1	Q9Y3Z3	626 aa	Known RBP	11.08	□□□□□ -0.64
FDPS-204	ENST00000461507	ATP23	Q9Y6H3	246 aa		11.08	□□□□□ -0.64
FDPS-204	ENST00000461507		U3KQV3	271 aa		11.08	□□□□□ -0.64
FDPS-204	ENST00000461507	ATR	Q13535	2644 aa		11.07	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 161.1 ms