RNA–Protein interactions for RNA: ENST00000413442.5

USP54-202, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 543 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-202ENST00000413442 TMEM53Q6P2H8 277 aa5.57□□□□□ -1.52
USP54-202ENST00000413442 LRFN4Q6PJG9 635 aa5.57□□□□□ -1.52
USP54-202ENST00000413442 WDR88Q6ZMY6 472 aa5.57□□□□□ -1.52
USP54-202ENST00000413442 DPY19L2P2Q6ZN68 376 aa5.57□□□□□ -1.52
USP54-202ENST00000413442 SLC46A3Q7Z3Q1 461 aa5.57□□□□□ -1.52
USP54-202ENST00000413442 ADCK1Q86TW2 530 aa5.57□□□□□ -1.52
USP54-202ENST00000413442 SLC22A24Q8N4F4 322 aa5.57□□□□□ -1.52
USP54-202ENST00000413442 FITM2Q8N6M3 262 aa5.57□□□□□ -1.52
USP54-202ENST00000413442 ARIH2OSQ8N7S6 290 aa5.57□□□□□ -1.52
USP54-202ENST00000413442 TMEM255BQ8WV15 326 aa5.57□□□□□ -1.52
USP54-202ENST00000413442 NEU4Q8WWR8 484 aaPredicted RBP5.57□□□□□ -1.52
USP54-202ENST00000413442 NRGNQ92686 78 aa5.57□□□□□ -1.52
USP54-202ENST00000413442 MCHR2Q969V1 340 aa5.57□□□□□ -1.52
USP54-202ENST00000413442 TXNDC15Q96J42 360 aa5.57□□□□□ -1.52
USP54-202ENST00000413442 HSH2DQ96JZ2 352 aa5.57□□□□□ -1.52
USP54-202ENST00000413442 C7orf34Q96L11 122 aa5.57□□□□□ -1.52
USP54-202ENST00000413442 DHRS1Q96LJ7 313 aa5.57□□□□□ -1.52
USP54-202ENST00000413442 COG8Q96MW5 612 aa5.57□□□□□ -1.52
USP54-202ENST00000413442 EMC6Q9BV81 110 aa5.57□□□□□ -1.52
USP54-202ENST00000413442 TRIM15Q9C019 465 aa5.57□□□□□ -1.52
USP54-202ENST00000413442 FAM107BQ9H098 131 aa5.57□□□□□ -1.52
USP54-202ENST00000413442 RAB1BQ9H0U4 201 aa5.57□□□□□ -1.52
USP54-202ENST00000413442 MMADHCQ9H3L0 296 aaPredicted RBP5.57□□□□□ -1.52
USP54-202ENST00000413442 GRHPRQ9UBQ7 328 aa5.57□□□□□ -1.52
USP54-202ENST00000413442 TMCC3Q9ULS5 477 aa5.57□□□□□ -1.52
USP54-202ENST00000413442 AURKCQ9UQB9 309 aa5.57□□□□□ -1.52
USP54-202ENST00000413442 ATP23Q9Y6H3 246 aa5.57□□□□□ -1.52
USP54-202ENST00000413442 PRRC2AP48634 2157 aaKnown RBP5.57□□□□□ -1.52
USP54-202ENST00000413442 OTOGQ6ZRI0 2925 aa5.57□□□□□ -1.52
USP54-202ENST00000413442 SPG11Q96JI7 2443 aa5.56□□□□□ -1.52
USP54-202ENST00000413442 IGHV1-18A0A0C4DH31 117 aa5.56□□□□□ -1.52
USP54-202ENST00000413442 IQCMA0A1B0GVH7 501 aa5.56□□□□□ -1.52
USP54-202ENST00000413442 C12orf71A8MTZ7 269 aa5.56□□□□□ -1.52
USP54-202ENST00000413442 E7EQL1 145 aa5.56□□□□□ -1.52
USP54-202ENST00000413442 C11orf98E9PRG8 122 aa5.56□□□□□ -1.52
USP54-202ENST00000413442 H3BSA7 217 aa5.56□□□□□ -1.52
USP54-202ENST00000413442 J3QW42 95 aa5.56□□□□□ -1.52
USP54-202ENST00000413442 FFAR1O14842 300 aa5.56□□□□□ -1.52
USP54-202ENST00000413442 ARPC3O15145 178 aa5.56□□□□□ -1.52
USP54-202ENST00000413442 ICMTO60725 284 aa5.56□□□□□ -1.52
USP54-202ENST00000413442 TRMUO75648 421 aaKnown RBP5.56□□□□□ -1.52
USP54-202ENST00000413442 NDUFB2O95178 105 aa5.56□□□□□ -1.52
USP54-202ENST00000413442 GADD45GO95257 159 aa5.56□□□□□ -1.52
USP54-202ENST00000413442 CD8AP01732 235 aa5.56□□□□□ -1.52
USP54-202ENST00000413442 FABP3P05413 133 aa5.56□□□□□ -1.52
USP54-202ENST00000413442 CD14P08571 375 aa5.56□□□□□ -1.52
USP54-202ENST00000413442 INHBBP09529 407 aa5.56□□□□□ -1.52
USP54-202ENST00000413442 COX5BP10606 129 aa5.56□□□□□ -1.52
USP54-202ENST00000413442 ZNF35P13682 527 aa5.56□□□□□ -1.52
USP54-202ENST00000413442 SLC25A16P16260 332 aa5.56□□□□□ -1.52
USP54-202ENST00000413442 ZNF14P17017 642 aaPredicted RBP5.56□□□□□ -1.52
USP54-202ENST00000413442 GSTM3P21266 225 aa5.56□□□□□ -1.52
USP54-202ENST00000413442 CBLP22681 906 aa5.56□□□□□ -1.52
USP54-202ENST00000413442 NR4A1P22736 598 aa5.56□□□□□ -1.52
USP54-202ENST00000413442 CRABP1P29762 137 aa5.56□□□□□ -1.52
USP54-202ENST00000413442 PPOXP50336 477 aa5.56□□□□□ -1.52
USP54-202ENST00000413442 RPS6KA3P51812 740 aa5.56□□□□□ -1.52
USP54-202ENST00000413442 FOXG1P55316 489 aaPredicted RBP5.56□□□□□ -1.52
USP54-202ENST00000413442 CTXN1P60606 82 aa5.56□□□□□ -1.52
USP54-202ENST00000413442 LSM6P62312 80 aaKnown RBP5.56□□□□□ -1.52
USP54-202ENST00000413442 SNRPD2P62316 118 aaKnown RBP5.56□□□□□ -1.52
USP54-202ENST00000413442 VLDLRP98155 873 aa5.56□□□□□ -1.52
USP54-202ENST00000413442 GALK2Q01415 458 aa5.56□□□□□ -1.52
USP54-202ENST00000413442 COX10Q12887 443 aa5.56□□□□□ -1.52
USP54-202ENST00000413442 LAPTM4AQ15012 233 aa5.56□□□□□ -1.52
USP54-202ENST00000413442 KRTAP21-3Q3LHN1 58 aa5.56□□□□□ -1.52
USP54-202ENST00000413442 DNAL1Q4LDG9 190 aa5.56□□□□□ -1.52
USP54-202ENST00000413442 FAM98BQ52LJ0 330 aaKnown RBP5.56□□□□□ -1.52
USP54-202ENST00000413442 HIKESHIQ53FT3 197 aa5.56□□□□□ -1.52
USP54-202ENST00000413442 Q5PR19 223 aa5.56□□□□□ -1.52
USP54-202ENST00000413442 C1orf94Q6P1W5 598 aa5.56□□□□□ -1.52
USP54-202ENST00000413442 DNM1P34Q6PK57 102 aa5.56□□□□□ -1.52
USP54-202ENST00000413442 DNM1P46Q6ZS02 220 aa5.56□□□□□ -1.52
USP54-202ENST00000413442 LINGO2Q7L985 606 aa5.56□□□□□ -1.52
USP54-202ENST00000413442 SLC16A14Q7RTX9 510 aa5.56□□□□□ -1.52
USP54-202ENST00000413442 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.56□□□□□ -1.52
USP54-202ENST00000413442 YTHDF3Q7Z739 585 aaKnown RBP5.56□□□□□ -1.52
USP54-202ENST00000413442 ZER1Q7Z7L7 766 aa5.56□□□□□ -1.52
USP54-202ENST00000413442 NRMQ8IXM6 262 aa5.56□□□□□ -1.52
USP54-202ENST00000413442 DEFB107AQ8IZN7 70 aa5.56□□□□□ -1.52
USP54-202ENST00000413442 LRRC17Q8N6Y2 441 aa5.56□□□□□ -1.52
USP54-202ENST00000413442 SLC7A13Q8TCU3 470 aa5.56□□□□□ -1.52
USP54-202ENST00000413442 ASB10Q8WXI3 467 aa5.56□□□□□ -1.52
USP54-202ENST00000413442 ASB9Q96DX5 294 aa5.56□□□□□ -1.52
USP54-202ENST00000413442 DNAJA3Q96EY1 480 aa5.56□□□□□ -1.52
USP54-202ENST00000413442 ZNF75AQ96N20 296 aa5.56□□□□□ -1.52
USP54-202ENST00000413442 ALKBH3Q96Q83 286 aaPredicted RBP5.56□□□□□ -1.52
USP54-202ENST00000413442 GPX7Q96SL4 187 aaPredicted RBP5.56□□□□□ -1.52
USP54-202ENST00000413442 KCNK17Q96T54 332 aa5.56□□□□□ -1.52
USP54-202ENST00000413442 BCL2L14Q9BZR8 327 aa5.56□□□□□ -1.52
USP54-202ENST00000413442 YY1AP1Q9H869 796 aa5.56□□□□□ -1.52
USP54-202ENST00000413442 NRIP3Q9NQ35 241 aa5.56□□□□□ -1.52
USP54-202ENST00000413442 DLL4Q9NR61 685 aa5.56□□□□□ -1.52
USP54-202ENST00000413442 CA10Q9NS85 328 aa5.56□□□□□ -1.52
USP54-202ENST00000413442 MAN2C1Q9NTJ4 1040 aa5.56□□□□□ -1.52
USP54-202ENST00000413442 TMEM38BQ9NVV0 291 aa5.56□□□□□ -1.52
USP54-202ENST00000413442 MED29Q9NX70 200 aa5.56□□□□□ -1.52
USP54-202ENST00000413442 NPAP1Q9NZP6 1156 aa5.56□□□□□ -1.52
USP54-202ENST00000413442 NDUFAF4Q9P032 175 aa5.56□□□□□ -1.52
USP54-202ENST00000413442 EIF3KQ9UBQ5 218 aaKnown RBP5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms