RNA–Protein interactions for RNA: ENST00000395145.3

CLDN3-201, Transcript of claudin 3, humanhuman

APPRIS P1 BASIC

Gene CLDN3, Length 1,274 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN3-201ENST00000395145 C10orf128Q5T292 105 aa17.82■□□□□ 0.44
CLDN3-201ENST00000395145 SMARCD3Q6STE5 483 aa17.82■□□□□ 0.44
CLDN3-201ENST00000395145 TMEM108Q6UXF1 575 aa17.82■□□□□ 0.44
CLDN3-201ENST00000395145 THSD4Q6ZMP0 1018 aa17.82■□□□□ 0.44
CLDN3-201ENST00000395145 ZNF704Q6ZNC4 412 aaPredicted RBP17.82■□□□□ 0.44
CLDN3-201ENST00000395145 CDH24Q86UP0 819 aa17.82■□□□□ 0.44
CLDN3-201ENST00000395145 FAM169BQ8N8A8 192 aa17.82■□□□□ 0.44
CLDN3-201ENST00000395145 SYT14Q8NB59 555 aa17.82■□□□□ 0.44
CLDN3-201ENST00000395145 OR9Q2Q8NGE9 314 aa17.82■□□□□ 0.44
CLDN3-201ENST00000395145 MCHR2Q969V1 340 aa17.82■□□□□ 0.44
CLDN3-201ENST00000395145 YY1AP1Q9H869 796 aa17.82■□□□□ 0.44
CLDN3-201ENST00000395145 SMURF2Q9HAU4 748 aa17.82■□□□□ 0.44
CLDN3-201ENST00000395145 NRIP3Q9NQ35 241 aa17.82■□□□□ 0.44
CLDN3-201ENST00000395145 CCM2LQ9NUG4 571 aaPredicted RBP17.82■□□□□ 0.44
CLDN3-201ENST00000395145 RNF115Q9Y4L5 304 aa17.82■□□□□ 0.44
CLDN3-201ENST00000395145 CCDC168Q8NDH2 2452 aa17.82■□□□□ 0.44
CLDN3-201ENST00000395145 FKBP6O75344 327 aa17.81■□□□□ 0.44
CLDN3-201ENST00000395145 PLAUP00749 431 aa17.81■□□□□ 0.44
CLDN3-201ENST00000395145 PTAFRP25105 342 aa17.81■□□□□ 0.44
CLDN3-201ENST00000395145 ZNF83P51522 516 aa17.81■□□□□ 0.44
CLDN3-201ENST00000395145 MICAQ29983 383 aa17.81■□□□□ 0.44
CLDN3-201ENST00000395145 C3orf36Q3SXR2 165 aa17.81■□□□□ 0.44
CLDN3-201ENST00000395145 ADAM5Q6NVV9 412 aa17.81■□□□□ 0.44
CLDN3-201ENST00000395145 PAMR1Q6UXH9 720 aa17.81■□□□□ 0.44
CLDN3-201ENST00000395145 ZNF813Q6ZN06 617 aa17.81■□□□□ 0.44
CLDN3-201ENST00000395145 DPY19L2P2Q6ZN68 376 aa17.81■□□□□ 0.44
CLDN3-201ENST00000395145 FANK1Q8TC84 345 aa17.81■□□□□ 0.44
CLDN3-201ENST00000395145 FNDC8Q8TC99 324 aa17.81■□□□□ 0.44
CLDN3-201ENST00000395145 NINJ1Q92982 152 aa17.81■□□□□ 0.44
CLDN3-201ENST00000395145 SLCO4A1Q96BD0 722 aa17.81■□□□□ 0.44
CLDN3-201ENST00000395145 LIME1Q9H400 295 aa17.81■□□□□ 0.44
CLDN3-201ENST00000395145 CRNNQ9UBG3 495 aaPredicted RBP17.81■□□□□ 0.44
CLDN3-201ENST00000395145 ST6GALNAC2Q9UJ37 374 aa17.81■□□□□ 0.44
CLDN3-201ENST00000395145 ADAM18Q9Y3Q7 739 aa17.81■□□□□ 0.44
CLDN3-201ENST00000395145 U3KQV3 271 aa17.81■□□□□ 0.44
CLDN3-201ENST00000395145 HEATR1Q9H583 2144 aaKnown RBP17.81■□□□□ 0.44
CLDN3-201ENST00000395145 PLCE1Q9P212 2302 aa17.81■□□□□ 0.44
CLDN3-201ENST00000395145 ENTPD5O75356 428 aa17.8■□□□□ 0.44
CLDN3-201ENST00000395145 SEC14L2O76054 403 aa17.8■□□□□ 0.44
CLDN3-201ENST00000395145 B4GALT1P15291 398 aa17.8■□□□□ 0.44
CLDN3-201ENST00000395145 CD40P25942 277 aa17.8■□□□□ 0.44
CLDN3-201ENST00000395145 SDHAP31040 664 aa17.8■□□□□ 0.44
CLDN3-201ENST00000395145 MYBPC1Q00872 1141 aa17.8■□□□□ 0.44
CLDN3-201ENST00000395145 PPP1R8Q12972 351 aaKnown RBP17.8■□□□□ 0.44
CLDN3-201ENST00000395145 RFX4Q33E94 735 aa17.8■□□□□ 0.44
CLDN3-201ENST00000395145 NRN1LQ496H8 165 aa17.8■□□□□ 0.44
CLDN3-201ENST00000395145 C1orf146Q5VVC0 180 aa17.8■□□□□ 0.44
CLDN3-201ENST00000395145 GPR139Q6DWJ6 353 aa17.8■□□□□ 0.44
CLDN3-201ENST00000395145 UTP4Q969X6 686 aaKnown RBP17.8■□□□□ 0.44
CLDN3-201ENST00000395145 Q96M85 177 aa17.8■□□□□ 0.44
CLDN3-201ENST00000395145 C1QTNF6Q9BXI9 259 aa17.8■□□□□ 0.44
CLDN3-201ENST00000395145 OR52D1Q9H346 318 aa17.8■□□□□ 0.44
CLDN3-201ENST00000395145 TMEM38BQ9NVV0 291 aa17.8■□□□□ 0.44
CLDN3-201ENST00000395145 GRHPRQ9UBQ7 328 aa17.8■□□□□ 0.44
CLDN3-201ENST00000395145 EDARQ9UNE0 448 aa17.8■□□□□ 0.44
CLDN3-201ENST00000395145 MGAT4BQ9UQ53 548 aa17.8■□□□□ 0.44
CLDN3-201ENST00000395145 CREBBPQ92793 2442 aa17.79■□□□□ 0.44
CLDN3-201ENST00000395145 ARRDC5A6NEK1 342 aa17.79■□□□□ 0.44
CLDN3-201ENST00000395145 M0R1B8 84 aa17.79■□□□□ 0.44
CLDN3-201ENST00000395145 AHCYL1O43865 530 aa17.79■□□□□ 0.44
CLDN3-201ENST00000395145 TXNDC12O95881 172 aa17.79■□□□□ 0.44
CLDN3-201ENST00000395145 GASTP01350 101 aa17.79■□□□□ 0.44
CLDN3-201ENST00000395145 IGKV3-15P01624 115 aa17.79■□□□□ 0.44
CLDN3-201ENST00000395145 IGLV1-44P01699 117 aa17.79■□□□□ 0.44
CLDN3-201ENST00000395145 APEHP13798 732 aaKnown RBP17.79■□□□□ 0.44
CLDN3-201ENST00000395145 ZNF84P51523 738 aa17.79■□□□□ 0.44
CLDN3-201ENST00000395145 CD47Q08722 323 aa17.79■□□□□ 0.44
CLDN3-201ENST00000395145 MESTQ5EB52 335 aa17.79■□□□□ 0.44
CLDN3-201ENST00000395145 THEM4Q5T1C6 240 aa17.79■□□□□ 0.44
CLDN3-201ENST00000395145 SLC25A47Q6Q0C1 308 aa17.79■□□□□ 0.44
CLDN3-201ENST00000395145 ZNF620Q6ZNG0 422 aa17.79■□□□□ 0.44
CLDN3-201ENST00000395145 LURAP1LQ8IV03 231 aa17.79■□□□□ 0.44
CLDN3-201ENST00000395145 LILRB1Q8NHL6 650 aaPredicted RBP17.79■□□□□ 0.44
CLDN3-201ENST00000395145 RADILQ96JH8 1075 aa17.79■□□□□ 0.44
CLDN3-201ENST00000395145 ZNF570Q96NI8 536 aa17.79■□□□□ 0.44
CLDN3-201ENST00000395145 DGCR6LQ9BY27 220 aa17.79■□□□□ 0.44
CLDN3-201ENST00000395145 B3GNT2Q9NY97 397 aa17.79■□□□□ 0.44
CLDN3-201ENST00000395145 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.79■□□□□ 0.44
CLDN3-201ENST00000395145 IL20RAQ9UHF4 553 aa17.79■□□□□ 0.44
CLDN3-201ENST00000395145 MYO9AB2RTY4 2548 aa17.78■□□□□ 0.44
CLDN3-201ENST00000395145 IGKV1D-43A0A0B4J1Z2 117 aa17.78■□□□□ 0.44
CLDN3-201ENST00000395145 ZNF503-AS2A6NEH8 195 aa17.78■□□□□ 0.44
CLDN3-201ENST00000395145 SHISA9B4DS77 424 aa17.78■□□□□ 0.44
CLDN3-201ENST00000395145 ABCD4O14678 606 aa17.78■□□□□ 0.44
CLDN3-201ENST00000395145 HS3ST1O14792 307 aa17.78■□□□□ 0.44
CLDN3-201ENST00000395145 SLC2A10O95528 541 aa17.78■□□□□ 0.44
CLDN3-201ENST00000395145 RAF1P04049 648 aa17.78■□□□□ 0.44
CLDN3-201ENST00000395145 CBR1P16152 277 aa17.78■□□□□ 0.44
CLDN3-201ENST00000395145 SLC6A6P31641 620 aa17.78■□□□□ 0.44
CLDN3-201ENST00000395145 ERFP50548 548 aa17.78■□□□□ 0.44
CLDN3-201ENST00000395145 RPS6KA3P51812 740 aa17.78■□□□□ 0.44
CLDN3-201ENST00000395145 TUBA1BP68363 451 aa17.78■□□□□ 0.44
CLDN3-201ENST00000395145 TUBA4AP68366 448 aa17.78■□□□□ 0.44
CLDN3-201ENST00000395145 FMODQ06828 376 aa17.78■□□□□ 0.44
CLDN3-201ENST00000395145 TUBA1AQ71U36 451 aa17.78■□□□□ 0.44
CLDN3-201ENST00000395145 SLC22A24Q8N4F4 322 aa17.78■□□□□ 0.44
CLDN3-201ENST00000395145 AQP11Q8NBQ7 271 aa17.78■□□□□ 0.44
CLDN3-201ENST00000395145 DUS3LQ96G46 650 aaKnown RBP17.78■□□□□ 0.44
CLDN3-201ENST00000395145 SLC38A2Q96QD8 506 aa17.78■□□□□ 0.44
CLDN3-201ENST00000395145 RBP7Q96R05 134 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms