RNA–Protein interactions for RNA: ENST00000394961.6

SMARCAD1-203, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

TSL 2

Gene SMARCAD1, Length 3,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-203ENST00000394961 EPHA3P29320 983 aa5.31□□□□□ -1.56
SMARCAD1-203ENST00000394961 MMP15P51511 669 aa5.31□□□□□ -1.56
SMARCAD1-203ENST00000394961 CDH12P55289 794 aa5.31□□□□□ -1.56
SMARCAD1-203ENST00000394961 LGALS3BPQ08380 585 aa5.31□□□□□ -1.56
SMARCAD1-203ENST00000394961 BNIP2Q12982 314 aa5.31□□□□□ -1.56
SMARCAD1-203ENST00000394961 TBC1D28Q2M2D7 210 aa5.31□□□□□ -1.56
SMARCAD1-203ENST00000394961 RPS26P11Q5JNZ5 115 aaPredicted RBP5.31□□□□□ -1.56
SMARCAD1-203ENST00000394961 FAM27BQ5VT28 67 aa5.31□□□□□ -1.56
SMARCAD1-203ENST00000394961 RGS7BPQ6MZT1 257 aaPredicted RBP5.31□□□□□ -1.56
SMARCAD1-203ENST00000394961 ERICH5Q6P6B1 374 aa5.31□□□□□ -1.56
SMARCAD1-203ENST00000394961 CADM2Q8N3J6 435 aa5.31□□□□□ -1.56
SMARCAD1-203ENST00000394961 C11orf65Q8NCR3 313 aa5.31□□□□□ -1.56
SMARCAD1-203ENST00000394961 ZNF418Q8TF45 676 aaPredicted RBP5.31□□□□□ -1.56
SMARCAD1-203ENST00000394961 ZNF775Q96BV0 537 aaPredicted RBP5.31□□□□□ -1.56
SMARCAD1-203ENST00000394961 ULBP2Q9BZM5 246 aa5.31□□□□□ -1.56
SMARCAD1-203ENST00000394961 SIAEQ9HAT2 523 aa5.31□□□□□ -1.56
SMARCAD1-203ENST00000394961 A0A1W2PR80 420 aa5.31□□□□□ -1.56
SMARCAD1-203ENST00000394961 BBIP1A8MTZ0 92 aa5.31□□□□□ -1.56
SMARCAD1-203ENST00000394961 C5orf58C9J3I9 102 aa5.31□□□□□ -1.56
SMARCAD1-203ENST00000394961 ANP32DO95626 131 aa5.31□□□□□ -1.56
SMARCAD1-203ENST00000394961 IGHV2-70P01814 119 aa5.31□□□□□ -1.56
SMARCAD1-203ENST00000394961 THY1P04216 161 aa5.31□□□□□ -1.56
SMARCAD1-203ENST00000394961 HKR1P10072 659 aa5.31□□□□□ -1.56
SMARCAD1-203ENST00000394961 ZNF12P17014 697 aa5.31□□□□□ -1.56
SMARCAD1-203ENST00000394961 SLC9A3P48764 834 aa5.31□□□□□ -1.56
SMARCAD1-203ENST00000394961 IDH3AP50213 366 aa5.31□□□□□ -1.56
SMARCAD1-203ENST00000394961 STX1BP61266 288 aa5.31□□□□□ -1.56
SMARCAD1-203ENST00000394961 PMS2P3Q13401 168 aa5.31□□□□□ -1.56
SMARCAD1-203ENST00000394961 TTC33Q6PID6 262 aaPredicted RBP5.31□□□□□ -1.56
SMARCAD1-203ENST00000394961 LRFN4Q6PJG9 635 aa5.31□□□□□ -1.56
SMARCAD1-203ENST00000394961 WDR88Q6ZMY6 472 aa5.31□□□□□ -1.56
SMARCAD1-203ENST00000394961 ZNF813Q6ZN06 617 aa5.31□□□□□ -1.56
SMARCAD1-203ENST00000394961 GPAT4Q86UL3 456 aa5.31□□□□□ -1.56
SMARCAD1-203ENST00000394961 ARMC8Q8IUR7 673 aa5.31□□□□□ -1.56
SMARCAD1-203ENST00000394961 SKA3Q8IX90 412 aa5.31□□□□□ -1.56
SMARCAD1-203ENST00000394961 TMEM86BQ8N661 226 aa5.31□□□□□ -1.56
SMARCAD1-203ENST00000394961 GPR32P1Q8NGA4 272 aa5.31□□□□□ -1.56
SMARCAD1-203ENST00000394961 C10orf82Q8WW14 230 aa5.31□□□□□ -1.56
SMARCAD1-203ENST00000394961 DVL3Q92997 716 aaPredicted RBP5.31□□□□□ -1.56
SMARCAD1-203ENST00000394961 ELMOD3Q96FG2 381 aa5.31□□□□□ -1.56
SMARCAD1-203ENST00000394961 POM121L2Q96KW2 1035 aa5.31□□□□□ -1.56
SMARCAD1-203ENST00000394961 OR52B2Q96RD2 323 aa5.31□□□□□ -1.56
SMARCAD1-203ENST00000394961 GPA33Q99795 319 aa5.31□□□□□ -1.56
SMARCAD1-203ENST00000394961 KAT8Q9H7Z6 458 aaKnown RBP5.31□□□□□ -1.56
SMARCAD1-203ENST00000394961 HINT3Q9NQE9 182 aaKnown RBP5.31□□□□□ -1.56
SMARCAD1-203ENST00000394961 IL20RAQ9UHF4 553 aa5.31□□□□□ -1.56
SMARCAD1-203ENST00000394961 OPN4Q9UHM6 478 aa5.31□□□□□ -1.56
SMARCAD1-203ENST00000394961 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.31□□□□□ -1.561e-7■■■■■ 29.4
SMARCAD1-203ENST00000394961 ZNF726A6NNF4 738 aa5.31□□□□□ -1.56
SMARCAD1-203ENST00000394961 POM121CA8CG34 1229 aa5.31□□□□□ -1.56
SMARCAD1-203ENST00000394961 OR7A10O76100 309 aa5.31□□□□□ -1.56
SMARCAD1-203ENST00000394961 VENTXO95231 258 aa5.31□□□□□ -1.56
SMARCAD1-203ENST00000394961 FARS2O95363 451 aaKnown RBP5.31□□□□□ -1.56
SMARCAD1-203ENST00000394961 IGHG1P01857 330 aa5.31□□□□□ -1.56
SMARCAD1-203ENST00000394961 MT-ND5P03915 603 aa5.31□□□□□ -1.56
SMARCAD1-203ENST00000394961 SLC6A2P23975 617 aa5.31□□□□□ -1.56
SMARCAD1-203ENST00000394961 KLF3P57682 345 aaPredicted RBP5.31□□□□□ -1.56
SMARCAD1-203ENST00000394961 RAB1AP62820 205 aa5.31□□□□□ -1.56
SMARCAD1-203ENST00000394961 HIST1H3AP68431 136 aa5.31□□□□□ -1.56
SMARCAD1-203ENST00000394961 GALK2Q01415 458 aa5.31□□□□□ -1.56
SMARCAD1-203ENST00000394961 IQCCQ4KMZ1 466 aa5.31□□□□□ -1.56
SMARCAD1-203ENST00000394961 HIST2H3PS2Q5TEC6 136 aa5.31□□□□□ -1.56
SMARCAD1-203ENST00000394961 HIST2H3AQ71DI3 136 aa5.31□□□□□ -1.56
SMARCAD1-203ENST00000394961 PCYOX1LQ8NBM8 494 aa5.31□□□□□ -1.56
SMARCAD1-203ENST00000394961 NFKBIDQ8NI38 313 aa5.31□□□□□ -1.56
SMARCAD1-203ENST00000394961 ZNF566Q969W8 418 aa5.31□□□□□ -1.56
SMARCAD1-203ENST00000394961 LRRC58Q96CX6 371 aa5.31□□□□□ -1.56
SMARCAD1-203ENST00000394961 MARS2Q96GW9 593 aaKnown RBP5.31□□□□□ -1.56
SMARCAD1-203ENST00000394961 GPX7Q96SL4 187 aaPredicted RBP5.31□□□□□ -1.56
SMARCAD1-203ENST00000394961 DYNLRB1Q9NP97 96 aa5.31□□□□□ -1.56
SMARCAD1-203ENST00000394961 VAPAQ9P0L0 249 aa5.31□□□□□ -1.56
SMARCAD1-203ENST00000394961 NAV3Q8IVL0 2385 aa5.31□□□□□ -1.56
SMARCAD1-203ENST00000394961 NR5A2O00482 541 aa5.3□□□□□ -1.56
SMARCAD1-203ENST00000394961 NCR1O76036 304 aa5.3□□□□□ -1.56
SMARCAD1-203ENST00000394961 IFNGR1P15260 489 aa5.3□□□□□ -1.56
SMARCAD1-203ENST00000394961 ZNF84P51523 738 aa5.3□□□□□ -1.56
SMARCAD1-203ENST00000394961 PCBD1P61457 104 aa5.3□□□□□ -1.56
SMARCAD1-203ENST00000394961 PAX2Q02962 417 aa5.3□□□□□ -1.56
SMARCAD1-203ENST00000394961 GTDC1Q4AE62 458 aa5.3□□□□□ -1.56
SMARCAD1-203ENST00000394961 CEP85LQ5SZL2 805 aa5.3□□□□□ -1.56
SMARCAD1-203ENST00000394961 PGM2L1Q6PCE3 622 aa5.3□□□□□ -1.56
SMARCAD1-203ENST00000394961 SLC35D2Q76EJ3 337 aa5.3□□□□□ -1.56
SMARCAD1-203ENST00000394961 WDFY1Q8IWB7 410 aa5.3□□□□□ -1.56
SMARCAD1-203ENST00000394961 RNF113BQ8IZP6 322 aaKnown RBP5.3□□□□□ -1.56
SMARCAD1-203ENST00000394961 LRRC17Q8N6Y2 441 aa5.3□□□□□ -1.56
SMARCAD1-203ENST00000394961 CELF2-AS1Q8N7Q2 184 aa5.3□□□□□ -1.56
SMARCAD1-203ENST00000394961 ANKS4BQ8N8V4 417 aa5.3□□□□□ -1.56
SMARCAD1-203ENST00000394961 SLC30A7Q8NEW0 376 aa5.3□□□□□ -1.56
SMARCAD1-203ENST00000394961 SYNPRQ8TBG9 265 aa5.3□□□□□ -1.56
SMARCAD1-203ENST00000394961 MGARPQ8TDB4 240 aa5.3□□□□□ -1.56
SMARCAD1-203ENST00000394961 VPS33AQ96AX1 596 aa5.3□□□□□ -1.56
SMARCAD1-203ENST00000394961 ZNF837Q96EG3 531 aaPredicted RBP5.3□□□□□ -1.56
SMARCAD1-203ENST00000394961 MOGAT1Q96PD6 335 aa5.3□□□□□ -1.56
SMARCAD1-203ENST00000394961 SH3GL1Q99961 368 aa5.3□□□□□ -1.56
SMARCAD1-203ENST00000394961 NKIRAS1Q9NYS0 192 aa5.3□□□□□ -1.56
SMARCAD1-203ENST00000394961 A6NIZ1 184 aa5.3□□□□□ -1.56
SMARCAD1-203ENST00000394961 EVPLLA8MZ36 301 aa5.3□□□□□ -1.56
SMARCAD1-203ENST00000394961 CLDN25C9JDP6 229 aa5.3□□□□□ -1.56
SMARCAD1-203ENST00000394961 PTBP3O95758 552 aaKnown RBP5.3□□□□□ -1.56
SMARCAD1-203ENST00000394961 ACADSP16219 412 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms