RNA–Protein interactions for RNA: ENST00000371123.5

SMARCA1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,948 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-203ENST00000371123 SPTBN5Q9NRC6 3674 aaKnown RBP7.97□□□□□ -1.13
SMARCA1-203ENST00000371123 COL6A3P12111 3177 aa7.97□□□□□ -1.13
SMARCA1-203ENST00000371123 C1QTNF3-AMACRE9PGA6 284 aa7.97□□□□□ -1.13
SMARCA1-203ENST00000371123 MAN2B1O00754 1011 aa7.97□□□□□ -1.13
SMARCA1-203ENST00000371123 PLPP1O14494 284 aa7.97□□□□□ -1.13
SMARCA1-203ENST00000371123 BHLHE40O14503 412 aa7.97□□□□□ -1.13
SMARCA1-203ENST00000371123 PRNPP04156 253 aa7.97□□□□□ -1.13
SMARCA1-203ENST00000371123 F13BP05160 661 aa7.97□□□□□ -1.13
SMARCA1-203ENST00000371123 ZDHHC11BP0C7U3 371 aa7.97□□□□□ -1.13
SMARCA1-203ENST00000371123 HOXA6P31267 233 aa7.97□□□□□ -1.13
SMARCA1-203ENST00000371123 GAS6Q14393 721 aa7.97□□□□□ -1.13
SMARCA1-203ENST00000371123 MAPK14Q16539 360 aa7.97□□□□□ -1.13
SMARCA1-203ENST00000371123 UBE2NLQ5JXB2 153 aa7.97□□□□□ -1.13
SMARCA1-203ENST00000371123 ZNF574Q6ZN55 896 aaPredicted RBP7.97□□□□□ -1.13
SMARCA1-203ENST00000371123 SFTPA2Q8IWL1 248 aa7.97□□□□□ -1.13
SMARCA1-203ENST00000371123 HSPA12BQ96MM6 686 aa7.97□□□□□ -1.13
SMARCA1-203ENST00000371123 VRK1Q99986 396 aaPredicted RBP7.97□□□□□ -1.13
SMARCA1-203ENST00000371123 MESP1Q9BRJ9 268 aa7.97□□□□□ -1.13
SMARCA1-203ENST00000371123 UBQLN3Q9H347 655 aa7.97□□□□□ -1.13
SMARCA1-203ENST00000371123 PIGMQ9H3S5 423 aa7.97□□□□□ -1.13
SMARCA1-203ENST00000371123 OR2S2Q9NQN1 319 aa7.97□□□□□ -1.13
SMARCA1-203ENST00000371123 PISDQ9UG56 409 aa7.97□□□□□ -1.13
SMARCA1-203ENST00000371123 ICKQ9UPZ9 632 aa7.97□□□□□ -1.13
SMARCA1-203ENST00000371123 AGPAT2O15120 278 aa7.97□□□□□ -1.13
SMARCA1-203ENST00000371123 CEBPBP17676 345 aa7.97□□□□□ -1.13
SMARCA1-203ENST00000371123 MAKP20794 623 aa7.97□□□□□ -1.13
SMARCA1-203ENST00000371123 SMIM11AP58511 58 aa7.97□□□□□ -1.13
SMARCA1-203ENST00000371123 SNRPNP63162 240 aaKnown RBP7.97□□□□□ -1.13
SMARCA1-203ENST00000371123 HTRA4P83105 476 aaPredicted RBP7.97□□□□□ -1.13
SMARCA1-203ENST00000371123 FHL1Q13642 323 aa7.97□□□□□ -1.13
SMARCA1-203ENST00000371123 ZNF383Q8NA42 475 aa7.97□□□□□ -1.13
SMARCA1-203ENST00000371123 PAQR8Q8TEZ7 354 aa7.97□□□□□ -1.13
SMARCA1-203ENST00000371123 C14orf79Q96F83 325 aa7.97□□□□□ -1.13
SMARCA1-203ENST00000371123 PELI1Q96FA3 418 aa7.97□□□□□ -1.13
SMARCA1-203ENST00000371123 SEC22AQ96IW7 307 aa7.97□□□□□ -1.13
SMARCA1-203ENST00000371123 ARL5BQ96KC2 179 aa7.97□□□□□ -1.13
SMARCA1-203ENST00000371123 YPEL4Q96NS1 127 aa7.97□□□□□ -1.13
SMARCA1-203ENST00000371123 CD180Q99467 661 aa7.97□□□□□ -1.13
SMARCA1-203ENST00000371123 NRIP2Q9BQI9 281 aa7.97□□□□□ -1.13
SMARCA1-203ENST00000371123 SCRT1Q9BWW7 348 aa7.97□□□□□ -1.13
SMARCA1-203ENST00000371123 CHRDQ9H2X0 955 aa7.97□□□□□ -1.13
SMARCA1-203ENST00000371123 C1orf198Q9H425 327 aa7.97□□□□□ -1.13
SMARCA1-203ENST00000371123 MED31Q9Y3C7 131 aa7.97□□□□□ -1.13
SMARCA1-203ENST00000371123 NPFFR2Q9Y5X5 522 aa7.97□□□□□ -1.13
SMARCA1-203ENST00000371123 CELSR3Q9NYQ7 3312 aa7.97□□□□□ -1.13
SMARCA1-203ENST00000371123 A0A1W2PQU0 124 aa7.97□□□□□ -1.13
SMARCA1-203ENST00000371123 C4orf47A7E2U8 309 aa7.97□□□□□ -1.13
SMARCA1-203ENST00000371123 ZNF749O43361 778 aa7.97□□□□□ -1.13
SMARCA1-203ENST00000371123 CDC40O60508 579 aaKnown RBP eCLIP7.97□□□□□ -1.13
SMARCA1-203ENST00000371123 SLC34A2O95436 690 aa7.97□□□□□ -1.13
SMARCA1-203ENST00000371123 NANOS3P60323 173 aaKnown RBP7.97□□□□□ -1.13
SMARCA1-203ENST00000371123 DUSP5Q16690 384 aa7.97□□□□□ -1.13
SMARCA1-203ENST00000371123 C5orf24Q7Z6I8 188 aa7.97□□□□□ -1.13
SMARCA1-203ENST00000371123 TMPRSS12Q86WS5 348 aa7.97□□□□□ -1.13
SMARCA1-203ENST00000371123 DCUN1D3Q8IWE4 304 aa7.97□□□□□ -1.13
SMARCA1-203ENST00000371123 JAGN1Q8N5M9 183 aa7.97□□□□□ -1.13
SMARCA1-203ENST00000371123 ACBD7Q8N6N7 88 aa7.97□□□□□ -1.13
SMARCA1-203ENST00000371123 BRIX1Q8TDN6 353 aaKnown RBP7.97□□□□□ -1.13
SMARCA1-203ENST00000371123 TIFAQ96CG3 184 aa7.97□□□□□ -1.13
SMARCA1-203ENST00000371123 TMEM27Q9HBJ8 222 aa7.97□□□□□ -1.13
SMARCA1-203ENST00000371123 MYNNQ9NPC7 610 aa7.97□□□□□ -1.13
SMARCA1-203ENST00000371123 STEAP1Q9UHE8 339 aa7.97□□□□□ -1.13
SMARCA1-203ENST00000371123 NOTCH3Q9UM47 2321 aa7.96□□□□□ -1.13
SMARCA1-203ENST00000371123 VPS13AQ96RL7 3174 aa7.96□□□□□ -1.13
SMARCA1-203ENST00000371123 TRAV1-2A0A0B4J238 106 aa7.96□□□□□ -1.13
SMARCA1-203ENST00000371123 TRBV2A0A0J9YWF9 115 aa7.96□□□□□ -1.13
SMARCA1-203ENST00000371123 DBX1A6NMT0 343 aa7.96□□□□□ -1.13
SMARCA1-203ENST00000371123 PRRT4C9JH25 899 aa7.96□□□□□ -1.13
SMARCA1-203ENST00000371123 BCL2L11O43521 198 aa7.96□□□□□ -1.13
SMARCA1-203ENST00000371123 FADS1O60427 444 aa7.96□□□□□ -1.13
SMARCA1-203ENST00000371123 STX11O75558 287 aa7.96□□□□□ -1.13
SMARCA1-203ENST00000371123 CD8AP01732 235 aa7.96□□□□□ -1.13
SMARCA1-203ENST00000371123 CD74P04233 296 aa7.96□□□□□ -1.13
SMARCA1-203ENST00000371123 S100A8P05109 93 aa7.96□□□□□ -1.13
SMARCA1-203ENST00000371123 SFTPBP07988 381 aa7.96□□□□□ -1.13
SMARCA1-203ENST00000371123 UBBP0CG47 229 aa7.96□□□□□ -1.13
SMARCA1-203ENST00000371123 UBCP0CG48 685 aaKnown RBP7.96□□□□□ -1.13
SMARCA1-203ENST00000371123 GLI4P10075 376 aa7.96□□□□□ -1.13
SMARCA1-203ENST00000371123 CTSAP10619 480 aa7.96□□□□□ -1.13
SMARCA1-203ENST00000371123 EIF2S3P41091 472 aaKnown RBP7.96□□□□□ -1.13
SMARCA1-203ENST00000371123 STARP49675 285 aa7.96□□□□□ -1.13
SMARCA1-203ENST00000371123 VEGFBP49765 207 aa7.96□□□□□ -1.13
SMARCA1-203ENST00000371123 FOXL2P58012 376 aa7.96□□□□□ -1.13
SMARCA1-203ENST00000371123 LSM6P62312 80 aaKnown RBP7.96□□□□□ -1.13
SMARCA1-203ENST00000371123 RPS27AP62979 156 aaKnown RBP7.96□□□□□ -1.13
SMARCA1-203ENST00000371123 UBA52P62987 128 aaKnown RBP7.96□□□□□ -1.13
SMARCA1-203ENST00000371123 PLEKHS1Q5SXH7 462 aa7.96□□□□□ -1.13
SMARCA1-203ENST00000371123 UQCC3Q6UW78 93 aa7.96□□□□□ -1.13
SMARCA1-203ENST00000371123 ZNF511Q8NB15 262 aa7.96□□□□□ -1.13
SMARCA1-203ENST00000371123 VN1R2Q8NFZ6 395 aa7.96□□□□□ -1.13
SMARCA1-203ENST00000371123 OR5AP2Q8NGF4 316 aa7.96□□□□□ -1.13
SMARCA1-203ENST00000371123 PFN4Q8NHR9 129 aa7.96□□□□□ -1.13
SMARCA1-203ENST00000371123 FIBINQ8TAL6 211 aa7.96□□□□□ -1.13
SMARCA1-203ENST00000371123 NPRL2Q8WTW4 380 aa7.96□□□□□ -1.13
SMARCA1-203ENST00000371123 PRRC1Q96M27 445 aa7.96□□□□□ -1.13
SMARCA1-203ENST00000371123 TMEM68Q96MH6 324 aa7.96□□□□□ -1.13
SMARCA1-203ENST00000371123 PHPT1Q9NRX4 125 aaPredicted RBP7.96□□□□□ -1.13
SMARCA1-203ENST00000371123 PCNX1Q96RV3 2341 aa7.96□□□□□ -1.14
SMARCA1-203ENST00000371123 ABCA1O95477 2261 aa7.96□□□□□ -1.14
SMARCA1-203ENST00000371123 A0A1W2PPH5 198 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms