RNA–Protein interactions for RNA: ENST00000631020.2

PNKP-224, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,545 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-224ENST00000631020 ADAM18Q9Y3Q7 739 aa16.46■□□□□ 0.23
PNKP-224ENST00000631020 SLC35F4A4IF30 521 aa16.45■□□□□ 0.22
PNKP-224ENST00000631020 A8MXE2 369 aa16.45■□□□□ 0.22
PNKP-224ENST00000631020 MITFO75030 526 aaPredicted RBP16.45■□□□□ 0.22
PNKP-224ENST00000631020 MRPL33O75394 65 aaKnown RBP16.45■□□□□ 0.22
PNKP-224ENST00000631020 SOX14O95416 240 aa16.45■□□□□ 0.22
PNKP-224ENST00000631020 RPL4P36578 427 aaKnown RBP16.45■□□□□ 0.22
PNKP-224ENST00000631020 OR3A2P47893 321 aa16.45■□□□□ 0.22
PNKP-224ENST00000631020 ERVK-25P63136 954 aa16.45■□□□□ 0.22
PNKP-224ENST00000631020 PPP2R2BQ00005 443 aa16.45■□□□□ 0.22
PNKP-224ENST00000631020 SNTB1Q13884 538 aaKnown RBP16.45■□□□□ 0.22
PNKP-224ENST00000631020 MELKQ14680 651 aa16.45■□□□□ 0.22
PNKP-224ENST00000631020 ARMC4Q5T2S8 1044 aa16.45■□□□□ 0.22
PNKP-224ENST00000631020 KDM4DQ6B0I6 523 aa16.45■□□□□ 0.22
PNKP-224ENST00000631020 CASP12Q6UXS9 341 aa16.45■□□□□ 0.22
PNKP-224ENST00000631020 ZNF610Q8N9Z0 462 aa16.45■□□□□ 0.22
PNKP-224ENST00000631020 OR2M2Q96R28 347 aa16.45■□□□□ 0.22
PNKP-224ENST00000631020 GPX7Q96SL4 187 aaPredicted RBP16.45■□□□□ 0.22
PNKP-224ENST00000631020 SLC29A1Q99808 456 aa16.45■□□□□ 0.22
PNKP-224ENST00000631020 KATNB1Q9BVA0 655 aa16.45■□□□□ 0.22
PNKP-224ENST00000631020 OSBPL10Q9BXB5 764 aa16.45■□□□□ 0.22
PNKP-224ENST00000631020 OPN3Q9H1Y3 402 aaPredicted RBP16.45■□□□□ 0.22
PNKP-224ENST00000631020 VCXQ9H320 206 aa16.45■□□□□ 0.22
PNKP-224ENST00000631020 TXNIPQ9H3M7 391 aa16.45■□□□□ 0.22
PNKP-224ENST00000631020 ZNF556Q9HAH1 456 aa16.45■□□□□ 0.22
PNKP-224ENST00000631020 NRIP3Q9NQ35 241 aa16.45■□□□□ 0.22
PNKP-224ENST00000631020 GALNT8Q9NY28 637 aa16.45■□□□□ 0.22
PNKP-224ENST00000631020 ZNF346Q9UL40 294 aaKnown RBP16.45■□□□□ 0.22
PNKP-224ENST00000631020 CDH10Q9Y6N8 788 aa16.45■□□□□ 0.22
PNKP-224ENST00000631020 AKAP6Q13023 2319 aa16.45■□□□□ 0.22
PNKP-224ENST00000631020 A0A1W2PRG6 482 aa16.45■□□□□ 0.22
PNKP-224ENST00000631020 SMNDC1O75940 238 aaKnown RBP eCLIP16.45■□□□□ 0.22
PNKP-224ENST00000631020 BCL10O95999 233 aa16.45■□□□□ 0.22
PNKP-224ENST00000631020 CD14P08571 375 aa16.45■□□□□ 0.22
PNKP-224ENST00000631020 CD8BP10966 210 aa16.45■□□□□ 0.22
PNKP-224ENST00000631020 BIDP55957 195 aa16.45■□□□□ 0.22
PNKP-224ENST00000631020 RUNX1T1Q06455 604 aa16.45■□□□□ 0.22
PNKP-224ENST00000631020 LGALS3BPQ08380 585 aa16.45■□□□□ 0.22
PNKP-224ENST00000631020 BLMHQ13867 455 aa16.45■□□□□ 0.22
PNKP-224ENST00000631020 NIPAL3Q6P499 406 aa16.45■□□□□ 0.22
PNKP-224ENST00000631020 TFAP2EQ6VUC0 442 aa16.45■□□□□ 0.22
PNKP-224ENST00000631020 DPY19L2P2Q6ZN68 376 aa16.45■□□□□ 0.22
PNKP-224ENST00000631020 FAM122BQ7Z309 247 aa16.45■□□□□ 0.22
PNKP-224ENST00000631020 TMEM123Q8N131 208 aa16.45■□□□□ 0.22
PNKP-224ENST00000631020 CBR4Q8N4T8 237 aa16.45■□□□□ 0.22
PNKP-224ENST00000631020 CLDN22Q8N7P3 220 aa16.45■□□□□ 0.22
PNKP-224ENST00000631020 DACH2Q96NX9 599 aa16.45■□□□□ 0.22
PNKP-224ENST00000631020 TSPAN32Q96QS1 320 aa16.45■□□□□ 0.22
PNKP-224ENST00000631020 ZNF184Q99676 751 aaPredicted RBP16.45■□□□□ 0.22
PNKP-224ENST00000631020 PARPBPQ9NWS1 579 aa16.45■□□□□ 0.22
PNKP-224ENST00000631020 KIF17Q9P2E2 1029 aa16.45■□□□□ 0.22
PNKP-224ENST00000631020 PRSS50Q9UI38 385 aa16.45■□□□□ 0.22
PNKP-224ENST00000631020 PROCRQ9UNN8 238 aa16.45■□□□□ 0.22
PNKP-224ENST00000631020 RCE1Q9Y256 329 aa16.45■□□□□ 0.22
PNKP-224ENST00000631020 ABCA4P78363 2273 aa16.44■□□□□ 0.22
PNKP-224ENST00000631020 NPIPB13A6NJU9 1138 aa16.44■□□□□ 0.22
PNKP-224ENST00000631020 NPIPB4C9JG80 1138 aa16.44■□□□□ 0.22
PNKP-224ENST00000631020 SOCS2O14508 198 aa16.44■□□□□ 0.22
PNKP-224ENST00000631020 IGHV3-9P01782 118 aa16.44■□□□□ 0.22
PNKP-224ENST00000631020 IGHMP01871 453 aa16.44■□□□□ 0.22
PNKP-224ENST00000631020 TOP3AQ13472 1001 aaPredicted RBP16.44■□□□□ 0.22
PNKP-224ENST00000631020 SLC36A3Q495N2 470 aa16.44■□□□□ 0.22
PNKP-224ENST00000631020 CLEC12AQ5QGZ9 265 aa16.44■□□□□ 0.22
PNKP-224ENST00000631020 ZNF474Q6S9Z5 364 aaPredicted RBP16.44■□□□□ 0.22
PNKP-224ENST00000631020 LUZP2Q86TE4 346 aa16.44■□□□□ 0.22
PNKP-224ENST00000631020 ZNF100Q8IYN0 542 aa16.44■□□□□ 0.22
PNKP-224ENST00000631020 OR6X1Q8NH79 312 aa16.44■□□□□ 0.22
PNKP-224ENST00000631020 ASB10Q8WXI3 467 aa16.44■□□□□ 0.22
PNKP-224ENST00000631020 APH1AQ96BI3 265 aa16.44■□□□□ 0.22
PNKP-224ENST00000631020 Q96M85 177 aa16.44■□□□□ 0.22
PNKP-224ENST00000631020 PAPOLBQ9NRJ5 636 aaKnown RBP16.44■□□□□ 0.22
PNKP-224ENST00000631020 IER3IP1Q9Y5U9 82 aa16.44■□□□□ 0.22
PNKP-224ENST00000631020 EI24O14681 340 aa16.43■□□□□ 0.22
PNKP-224ENST00000631020 PPP1R3DO95685 299 aa16.43■□□□□ 0.22
PNKP-224ENST00000631020 ALPLP05186 524 aa16.43■□□□□ 0.22
PNKP-224ENST00000631020 OSMP13725 252 aa16.43■□□□□ 0.22
PNKP-224ENST00000631020 SLC6A6P31641 620 aa16.43■□□□□ 0.22
PNKP-224ENST00000631020 RPL27P61353 136 aaKnown RBP16.43■□□□□ 0.22
PNKP-224ENST00000631020 CAMK2DQ13557 499 aa16.43■□□□□ 0.22
PNKP-224ENST00000631020 TSPO2Q5TGU0 170 aa16.43■□□□□ 0.22
PNKP-224ENST00000631020 CARD17Q5XLA6 110 aa16.43■□□□□ 0.22
PNKP-224ENST00000631020 LPCAT4Q643R3 524 aa16.43■□□□□ 0.22
PNKP-224ENST00000631020 ZNF519Q8TB69 540 aa16.43■□□□□ 0.22
PNKP-224ENST00000631020 IFT27Q9BW83 186 aa16.43■□□□□ 0.22
PNKP-224ENST00000631020 TSSK6Q9BXA6 273 aa16.43■□□□□ 0.22
PNKP-224ENST00000631020 SLC7A10Q9NS82 523 aa16.43■□□□□ 0.22
PNKP-224ENST00000631020 POFUT2Q9Y2G5 429 aa16.43■□□□□ 0.22
PNKP-224ENST00000631020 ZNF726A6NNF4 738 aa16.42■□□□□ 0.22
PNKP-224ENST00000631020 BHLHE40O14503 412 aa16.42■□□□□ 0.22
PNKP-224ENST00000631020 UPK3AO75631 287 aa16.42■□□□□ 0.22
PNKP-224ENST00000631020 DAP3P51398 398 aaKnown RBP16.42■□□□□ 0.22
PNKP-224ENST00000631020 DAG1Q14118 895 aa16.42■□□□□ 0.22
PNKP-224ENST00000631020 TRIP10Q15642 601 aa16.42■□□□□ 0.22
PNKP-224ENST00000631020 PHYHD1Q5SRE7 291 aa16.42■□□□□ 0.22
PNKP-224ENST00000631020 RPL13AP3Q6NVV1 102 aa16.42■□□□□ 0.22
PNKP-224ENST00000631020 CDC20BQ86Y33 519 aa16.42■□□□□ 0.22
PNKP-224ENST00000631020 PARP8Q8N3A8 854 aa16.42■□□□□ 0.22
PNKP-224ENST00000631020 ARIH2OSQ8N7S6 290 aa16.42■□□□□ 0.22
PNKP-224ENST00000631020 OR4Q3Q8NH05 313 aa16.42■□□□□ 0.22
PNKP-224ENST00000631020 LINC01560Q8TB33 94 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms