RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 SLC19A3Q9BZV2 496 aa15.31■□□□□ 0.04
SHKBP1-227ENST00000602011 LRMDAQ9H2I8 198 aa15.31■□□□□ 0.04
SHKBP1-227ENST00000602011 TPK1Q9H3S4 243 aa15.31■□□□□ 0.04
SHKBP1-227ENST00000602011 MED29Q9NX70 200 aa15.31■□□□□ 0.04
SHKBP1-227ENST00000602011 SLCO1C1Q9NYB5 712 aa15.31■□□□□ 0.04
SHKBP1-227ENST00000602011 GLTPQ9NZD2 209 aa15.31■□□□□ 0.04
SHKBP1-227ENST00000602011 ANGPT4Q9Y264 503 aa15.31■□□□□ 0.04
SHKBP1-227ENST00000602011 CHP2O43745 196 aa15.3■□□□□ 0.04
SHKBP1-227ENST00000602011 SEC14L2O76054 403 aa15.3■□□□□ 0.04
SHKBP1-227ENST00000602011 MFN2O95140 757 aa15.3■□□□□ 0.04
SHKBP1-227ENST00000602011 MSMBP08118 114 aa15.3■□□□□ 0.04
SHKBP1-227ENST00000602011 ADORA3P0DMS8 318 aa15.3■□□□□ 0.04
SHKBP1-227ENST00000602011 SAGP10523 405 aaPredicted RBP15.3■□□□□ 0.04
SHKBP1-227ENST00000602011 B4GALT1P15291 398 aa15.3■□□□□ 0.04
SHKBP1-227ENST00000602011 ITGA2P17301 1181 aa15.3■□□□□ 0.04
SHKBP1-227ENST00000602011 RAD52P43351 418 aa15.3■□□□□ 0.04
SHKBP1-227ENST00000602011 ATP4BP51164 291 aa15.3■□□□□ 0.04
SHKBP1-227ENST00000602011 CDH12P55289 794 aa15.3■□□□□ 0.04
SHKBP1-227ENST00000602011 RUNX1T1Q06455 604 aa15.3■□□□□ 0.04
SHKBP1-227ENST00000602011 TRIP10Q15642 601 aa15.3■□□□□ 0.04
SHKBP1-227ENST00000602011 FAM209AQ5JX71 171 aa15.3■□□□□ 0.04
SHKBP1-227ENST00000602011 C12orf54Q6X4T0 127 aa15.3■□□□□ 0.04
SHKBP1-227ENST00000602011 FUNDC1Q8IVP5 155 aa15.3■□□□□ 0.04
SHKBP1-227ENST00000602011 SLC30A8Q8IWU4 369 aa15.3■□□□□ 0.04
SHKBP1-227ENST00000602011 MSRB3Q8IXL7 192 aa15.3■□□□□ 0.04
SHKBP1-227ENST00000602011 SLC22A24Q8N4F4 322 aa15.3■□□□□ 0.04
SHKBP1-227ENST00000602011 OR51F2Q8NH61 342 aa15.3■□□□□ 0.04
SHKBP1-227ENST00000602011 ZNF418Q8TF45 676 aaPredicted RBP15.3■□□□□ 0.04
SHKBP1-227ENST00000602011 TMEM54Q969K7 222 aa15.3■□□□□ 0.04
SHKBP1-227ENST00000602011 ZNF566Q969W8 418 aa15.3■□□□□ 0.04
SHKBP1-227ENST00000602011 TLCD1Q96CP7 247 aa15.3■□□□□ 0.04
SHKBP1-227ENST00000602011 SLC25A44Q96H78 314 aaPredicted RBP15.3■□□□□ 0.04
SHKBP1-227ENST00000602011 MS4A3Q96HJ5 214 aa15.3■□□□□ 0.04
SHKBP1-227ENST00000602011 MPP4Q96JB8 637 aa15.3■□□□□ 0.04
SHKBP1-227ENST00000602011 MOGAT1Q96PD6 335 aa15.3■□□□□ 0.04
SHKBP1-227ENST00000602011 RSPO3Q9BXY4 272 aaPredicted RBP15.3■□□□□ 0.04
SHKBP1-227ENST00000602011 NKIRAS2Q9NYR9 191 aa15.3■□□□□ 0.04
SHKBP1-227ENST00000602011 CCDC167Q9P0B6 97 aa15.3■□□□□ 0.04
SHKBP1-227ENST00000602011 VAPAQ9P0L0 249 aa15.3■□□□□ 0.04
SHKBP1-227ENST00000602011 DUSP13Q9UII6 198 aa15.3■□□□□ 0.04
SHKBP1-227ENST00000602011 TRBV5-3A0A0A0MS03 114 aa15.29■□□□□ 0.04
SHKBP1-227ENST00000602011 TRAV20A0A0B4J274 112 aa15.29■□□□□ 0.04
SHKBP1-227ENST00000602011 CENPBD1B2RD01 187 aa15.29■□□□□ 0.04
SHKBP1-227ENST00000602011 LYNX1G3V0Z9 82 aa15.29■□□□□ 0.04
SHKBP1-227ENST00000602011 MT-ND5P03915 603 aa15.29■□□□□ 0.04
SHKBP1-227ENST00000602011 HIST1H2ABP04908 130 aa15.29■□□□□ 0.04
SHKBP1-227ENST00000602011 LYNX1P0DP58 116 aa15.29■□□□□ 0.04
SHKBP1-227ENST00000602011 COL8A2P25067 703 aa15.29■□□□□ 0.04
SHKBP1-227ENST00000602011 AQP5P55064 265 aa15.29■□□□□ 0.04
SHKBP1-227ENST00000602011 BIDP55957 195 aa15.29■□□□□ 0.04
SHKBP1-227ENST00000602011 MYBPC1Q00872 1141 aa15.29■□□□□ 0.04
SHKBP1-227ENST00000602011 GLIPR1L2Q4G1C9 344 aa15.29■□□□□ 0.04
SHKBP1-227ENST00000602011 RGS7BPQ6MZT1 257 aaPredicted RBP15.29■□□□□ 0.04
SHKBP1-227ENST00000602011 TMEM53Q6P2H8 277 aa15.29■□□□□ 0.04
SHKBP1-227ENST00000602011 TTC33Q6PID6 262 aaPredicted RBP15.29■□□□□ 0.04
SHKBP1-227ENST00000602011 SLC35D2Q76EJ3 337 aa15.29■□□□□ 0.04
SHKBP1-227ENST00000602011 HIST3H2AQ7L7L0 130 aa15.29■□□□□ 0.04
SHKBP1-227ENST00000602011 C11orf65Q8NCR3 313 aa15.29■□□□□ 0.04
SHKBP1-227ENST00000602011 CLDND2Q8NHS1 167 aa15.29■□□□□ 0.04
SHKBP1-227ENST00000602011 C11orf40Q8WZ69 217 aa15.29■□□□□ 0.04
SHKBP1-227ENST00000602011 HIST1H2ACQ93077 130 aa15.29■□□□□ 0.04
SHKBP1-227ENST00000602011 JMJD8Q96S16 334 aa15.29■□□□□ 0.04
SHKBP1-227ENST00000602011 MCHR1Q99705 422 aa15.29■□□□□ 0.04
SHKBP1-227ENST00000602011 BCL2L14Q9BZR8 327 aa15.29■□□□□ 0.04
SHKBP1-227ENST00000602011 OCEL1Q9H607 264 aa15.29■□□□□ 0.04
SHKBP1-227ENST00000602011 SLCO1B3Q9NPD5 702 aa15.29■□□□□ 0.04
SHKBP1-227ENST00000602011 SLC52A3Q9NQ40 469 aa15.29■□□□□ 0.04
SHKBP1-227ENST00000602011 NANSQ9NR45 359 aa15.29■□□□□ 0.04
SHKBP1-227ENST00000602011 HIF1ANQ9NWT6 349 aa15.29■□□□□ 0.04
SHKBP1-227ENST00000602011 ZNF224Q9NZL3 707 aa15.29■□□□□ 0.04
SHKBP1-227ENST00000602011 SLAMF8Q9P0V8 285 aa15.29■□□□□ 0.04
SHKBP1-227ENST00000602011 TENM1Q9UKZ4 2725 aa15.28■□□□□ 0.04
SHKBP1-227ENST00000602011 A0A1W2PPW3 197 aa15.28■□□□□ 0.04
SHKBP1-227ENST00000602011 TPST2O60704 377 aa15.28■□□□□ 0.04
SHKBP1-227ENST00000602011 ERLIN1O75477 346 aa15.28■□□□□ 0.04
SHKBP1-227ENST00000602011 HPXP02790 462 aa15.28■□□□□ 0.04
SHKBP1-227ENST00000602011 IDH3AP50213 366 aa15.28■□□□□ 0.04
SHKBP1-227ENST00000602011 PLP2Q04941 152 aa15.28■□□□□ 0.04
SHKBP1-227ENST00000602011 CCNIQ14094 377 aa15.28■□□□□ 0.04
SHKBP1-227ENST00000602011 RAB39AQ14964 217 aa15.28■□□□□ 0.04
SHKBP1-227ENST00000602011 SLC36A2Q495M3 483 aa15.28■□□□□ 0.04
SHKBP1-227ENST00000602011 PAGE3Q5JUK9 113 aa15.28■□□□□ 0.04
SHKBP1-227ENST00000602011 SHQ1Q6PI26 577 aaKnown RBP15.28■□□□□ 0.04
SHKBP1-227ENST00000602011 UNQ6126/PRO20091Q6UXV3 157 aa15.28■□□□□ 0.04
SHKBP1-227ENST00000602011 USP43Q70EL4 1123 aa15.28■□□□□ 0.04
SHKBP1-227ENST00000602011 HDDC2Q7Z4H3 204 aa15.28■□□□□ 0.04
SHKBP1-227ENST00000602011 SKA3Q8IX90 412 aa15.28■□□□□ 0.04
SHKBP1-227ENST00000602011 C1orf174Q8IYL3 243 aa15.28■□□□□ 0.04
SHKBP1-227ENST00000602011 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP15.28■□□□□ 0.04
SHKBP1-227ENST00000602011 ZNF519Q8TB69 540 aa15.28■□□□□ 0.04
SHKBP1-227ENST00000602011 SNX33Q8WV41 574 aa15.28■□□□□ 0.04
SHKBP1-227ENST00000602011 RASSF5Q8WWW0 418 aa15.28■□□□□ 0.04
SHKBP1-227ENST00000602011 SYT3Q9BQG1 590 aa15.28■□□□□ 0.04
SHKBP1-227ENST00000602011 TMBIM4Q9HC24 238 aa15.28■□□□□ 0.04
SHKBP1-227ENST00000602011 STX18Q9P2W9 335 aaKnown RBP15.28■□□□□ 0.04
SHKBP1-227ENST00000602011 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.28■□□□□ 0.04
SHKBP1-227ENST00000602011 ZNF229Q9UJW7 825 aa15.28■□□□□ 0.04
SHKBP1-227ENST00000602011 DHHO43323 396 aa15.27■□□□□ 0.04
SHKBP1-227ENST00000602011 PPIHO43447 177 aaKnown RBP15.27■□□□□ 0.04
SHKBP1-227ENST00000602011 SNAP29O95721 258 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 115.8 ms