RNA–Protein interactions for RNA: ENST00000420489.6

CNGA1-203, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene CNGA1, Length 2,746 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-203ENST00000420489 KCNS3Q9BQ31 491 aa3.21□□□□□ -1.9
CNGA1-203ENST00000420489 PELOQ9BRX2 385 aaKnown RBP3.21□□□□□ -1.9
CNGA1-203ENST00000420489 NPLQ9BXD5 320 aaPredicted RBP3.21□□□□□ -1.9
CNGA1-203ENST00000420489 NOL11Q9H8H0 719 aaKnown RBP3.21□□□□□ -1.9
CNGA1-203ENST00000420489 NMRAL1Q9HBL8 299 aa3.21□□□□□ -1.9
CNGA1-203ENST00000420489 HMG20AQ9NP66 347 aa3.21□□□□□ -1.9
CNGA1-203ENST00000420489 SACM1LQ9NTJ5 587 aa3.21□□□□□ -1.9
CNGA1-203ENST00000420489 MARCH4Q9P2E8 410 aaPredicted RBP3.21□□□□□ -1.9
CNGA1-203ENST00000420489 ZNF229Q9UJW7 825 aa3.21□□□□□ -1.9
CNGA1-203ENST00000420489 RUVBL2Q9Y230 463 aaKnown RBP3.21□□□□□ -1.9
CNGA1-203ENST00000420489 FREM1Q5H8C1 2179 aa3.21□□□□□ -1.9
CNGA1-203ENST00000420489 A0A096LPK6 155 aa3.21□□□□□ -1.9
CNGA1-203ENST00000420489 ELOVL7A1L3X0 281 aa3.21□□□□□ -1.9
CNGA1-203ENST00000420489 SAC3D1A6NKF1 404 aa3.21□□□□□ -1.9
CNGA1-203ENST00000420489 ISM1B1AKI9 464 aa3.21□□□□□ -1.9
CNGA1-203ENST00000420489 SRRM5B3KS81 715 aa3.21□□□□□ -1.9
CNGA1-203ENST00000420489 CLDN25C9JDP6 229 aa3.21□□□□□ -1.9
CNGA1-203ENST00000420489 PFDN6O15212 129 aa3.21□□□□□ -1.9
CNGA1-203ENST00000420489 CLOCKO15516 846 aa3.21□□□□□ -1.9
CNGA1-203ENST00000420489 NME6O75414 186 aaPredicted RBP3.21□□□□□ -1.9
CNGA1-203ENST00000420489 GMNNO75496 209 aa3.21□□□□□ -1.9
CNGA1-203ENST00000420489 GRAP2O75791 330 aa3.21□□□□□ -1.9
CNGA1-203ENST00000420489 SRP72O76094 671 aaKnown RBP3.21□□□□□ -1.9
CNGA1-203ENST00000420489 CH25HO95992 272 aa3.21□□□□□ -1.9
CNGA1-203ENST00000420489 ZNF182P17025 639 aaPredicted RBP3.21□□□□□ -1.9
CNGA1-203ENST00000420489 SAT1P21673 171 aa3.21□□□□□ -1.9
CNGA1-203ENST00000420489 GCSHP23434 173 aa3.21□□□□□ -1.9
CNGA1-203ENST00000420489 ARRB2P32121 409 aa3.21□□□□□ -1.9
CNGA1-203ENST00000420489 CAPZA1P52907 286 aa3.21□□□□□ -1.9
CNGA1-203ENST00000420489 TMBIM6P55061 237 aa3.21□□□□□ -1.9
CNGA1-203ENST00000420489 UCP2P55851 309 aa3.21□□□□□ -1.9
CNGA1-203ENST00000420489 KRTAP10-3P60369 221 aa3.21□□□□□ -1.9
CNGA1-203ENST00000420489 MRPS11P82912 194 aaKnown RBP3.21□□□□□ -1.9
CNGA1-203ENST00000420489 MERTKQ12866 999 aa3.21□□□□□ -1.9
CNGA1-203ENST00000420489 SLC10A2Q12908 348 aaPredicted RBP3.21□□□□□ -1.9
CNGA1-203ENST00000420489 ZNF846Q147U1 533 aa3.21□□□□□ -1.9
CNGA1-203ENST00000420489 NTRK2Q16620 822 aa3.21□□□□□ -1.9
CNGA1-203ENST00000420489 CDO1Q16878 200 aa3.21□□□□□ -1.9
CNGA1-203ENST00000420489 PARP15Q460N3 678 aa3.21□□□□□ -1.9
CNGA1-203ENST00000420489 C6orf183Q5T699 404 aa3.21□□□□□ -1.9
CNGA1-203ENST00000420489 ARMC12Q5T9G4 340 aa3.21□□□□□ -1.9
CNGA1-203ENST00000420489 LIPMQ5VYY2 423 aa3.21□□□□□ -1.9
CNGA1-203ENST00000420489 ANKRD26P1Q6NSI1 321 aa3.21□□□□□ -1.9
CNGA1-203ENST00000420489 DENND1BQ6P3S1 775 aa3.21□□□□□ -1.9
CNGA1-203ENST00000420489 RFPL4BQ6ZWI9 263 aa3.21□□□□□ -1.9
CNGA1-203ENST00000420489 UTS2BQ765I0 119 aa3.21□□□□□ -1.9
CNGA1-203ENST00000420489 ZNF534Q76KX8 674 aa3.21□□□□□ -1.9
CNGA1-203ENST00000420489 SLC26A9Q7LBE3 791 aa3.21□□□□□ -1.9
CNGA1-203ENST00000420489 PAGE2Q7Z2X7 111 aa3.21□□□□□ -1.9
CNGA1-203ENST00000420489 DCXRQ7Z4W1 244 aa3.21□□□□□ -1.9
CNGA1-203ENST00000420489 CMC1Q7Z7K0 106 aa3.21□□□□□ -1.9
CNGA1-203ENST00000420489 SERPINA12Q8IW75 414 aa3.21□□□□□ -1.9
CNGA1-203ENST00000420489 FAM185AQ8N0U4 392 aa3.21□□□□□ -1.9
CNGA1-203ENST00000420489 CBR4Q8N4T8 237 aa3.21□□□□□ -1.9
CNGA1-203ENST00000420489 L3MBTL4Q8NA19 623 aa3.21□□□□□ -1.9
CNGA1-203ENST00000420489 C9orf106Q8NAJ2 232 aa3.21□□□□□ -1.9
CNGA1-203ENST00000420489 NFKBIDQ8NI38 313 aa3.21□□□□□ -1.9
CNGA1-203ENST00000420489 SELENOMQ8WWX9 145 aa3.21□□□□□ -1.9
CNGA1-203ENST00000420489 LPGAT1Q92604 370 aa3.21□□□□□ -1.9
CNGA1-203ENST00000420489 RASD2Q96D21 266 aa3.21□□□□□ -1.9
CNGA1-203ENST00000420489 SCRN2Q96FV2 425 aa3.21□□□□□ -1.9
CNGA1-203ENST00000420489 FBXL20Q96IG2 436 aa3.21□□□□□ -1.9
CNGA1-203ENST00000420489 SNX22Q96L94 193 aa3.21□□□□□ -1.9
CNGA1-203ENST00000420489 C12orf66Q96MD2 445 aa3.21□□□□□ -1.9
CNGA1-203ENST00000420489 WDFY2Q96P53 400 aa3.21□□□□□ -1.9
CNGA1-203ENST00000420489 DGAT2Q96PD7 388 aa3.21□□□□□ -1.9
CNGA1-203ENST00000420489 OPALINQ96PE5 141 aa3.21□□□□□ -1.9
CNGA1-203ENST00000420489 CPXM1Q96SM3 734 aa3.21□□□□□ -1.9
CNGA1-203ENST00000420489 MGME1Q9BQP7 344 aa3.21□□□□□ -1.9
CNGA1-203ENST00000420489 ZNF670Q9BS34 389 aa3.21□□□□□ -1.9
CNGA1-203ENST00000420489 RIOK2Q9BVS4 552 aaKnown RBP3.21□□□□□ -1.9
CNGA1-203ENST00000420489 RTN4RQ9BZR6 473 aa3.21□□□□□ -1.9
CNGA1-203ENST00000420489 MFFQ9GZY8 342 aa3.21□□□□□ -1.9
CNGA1-203ENST00000420489 PCDHAC1Q9H158 963 aa3.21□□□□□ -1.9
CNGA1-203ENST00000420489 KIR3DX1Q9H7L2 352 aa3.21□□□□□ -1.9
CNGA1-203ENST00000420489 SYNPO2LQ9H987 977 aa3.21□□□□□ -1.9
CNGA1-203ENST00000420489 NECTIN3Q9NQS3 549 aa3.21□□□□□ -1.9
CNGA1-203ENST00000420489 SLC17A6Q9P2U8 582 aa3.21□□□□□ -1.9
CNGA1-203ENST00000420489 CYB5R1Q9UHQ9 305 aa3.21□□□□□ -1.9
CNGA1-203ENST00000420489 CD84Q9UIB8 345 aa3.21□□□□□ -1.9
CNGA1-203ENST00000420489 FBXW2Q9UKT8 454 aa3.21□□□□□ -1.9
CNGA1-203ENST00000420489 NUP50Q9UKX7 468 aa3.21□□□□□ -1.9
CNGA1-203ENST00000420489 SAMHD1Q9Y3Z3 626 aaKnown RBP3.21□□□□□ -1.9
CNGA1-203ENST00000420489 ABCA1O95477 2261 aa3.2□□□□□ -1.9
CNGA1-203ENST00000420489 SEC16AO15027 2179 aa3.2□□□□□ -1.9
CNGA1-203ENST00000420489 DNAH11Q96DT5 4516 aa3.2□□□□□ -1.9
CNGA1-203ENST00000420489 RAB19A4D1S5 217 aa3.2□□□□□ -1.9
CNGA1-203ENST00000420489 MYO1GB0I1T2 1018 aa3.2□□□□□ -1.9
CNGA1-203ENST00000420489 EEF1E1-BLOC1S5C9J1V9 151 aa3.2□□□□□ -1.9
CNGA1-203ENST00000420489 SLC33A1O00400 549 aaPredicted RBP3.2□□□□□ -1.9
CNGA1-203ENST00000420489 BTN3A1O00481 513 aa3.2□□□□□ -1.9
CNGA1-203ENST00000420489 SOCS2O14508 198 aa3.2□□□□□ -1.9
CNGA1-203ENST00000420489 EEF1E1O43324 174 aaKnown RBP3.2□□□□□ -1.9
CNGA1-203ENST00000420489 DNPH1O43598 174 aa3.2□□□□□ -1.9
CNGA1-203ENST00000420489 NDUFA2O43678 99 aa3.2□□□□□ -1.9
CNGA1-203ENST00000420489 CDC40O60508 579 aaKnown RBP eCLIP3.2□□□□□ -1.9
CNGA1-203ENST00000420489 SRPX2O60687 465 aaPredicted RBP3.2□□□□□ -1.9
CNGA1-203ENST00000420489 B4GALT2O60909 372 aa3.2□□□□□ -1.9
CNGA1-203ENST00000420489 CHRNGP07510 517 aa3.2□□□□□ -1.9
CNGA1-203ENST00000420489 CHRM5P08912 532 aaPredicted RBP3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms