RNA–Protein interactions for RNA: ENST00000413442.5

USP54-202, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 543 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-202ENST00000413442 SERPINA1P01009 418 aa5.58□□□□□ -1.52
USP54-202ENST00000413442 IGHV3-9P01782 118 aa5.58□□□□□ -1.52
USP54-202ENST00000413442 IGHMP01871 453 aa5.58□□□□□ -1.52
USP54-202ENST00000413442 THY1P04216 161 aa5.58□□□□□ -1.52
USP54-202ENST00000413442 SERPINA5P05154 406 aa5.58□□□□□ -1.52
USP54-202ENST00000413442 H1F0P07305 194 aaKnown RBP5.58□□□□□ -1.52
USP54-202ENST00000413442 APEHP13798 732 aaKnown RBP5.58□□□□□ -1.52
USP54-202ENST00000413442 OR1E2P47887 323 aa5.58□□□□□ -1.52
USP54-202ENST00000413442 PTDSS1P48651 473 aaKnown RBP5.58□□□□□ -1.52
USP54-202ENST00000413442 PTH2RP49190 550 aa5.58□□□□□ -1.52
USP54-202ENST00000413442 FABP6P51161 128 aa5.58□□□□□ -1.52
USP54-202ENST00000413442 UGT2B15P54855 530 aa5.58□□□□□ -1.52
USP54-202ENST00000413442 BIDP55957 195 aa5.58□□□□□ -1.52
USP54-202ENST00000413442 SELENOVP59797 346 aa5.58□□□□□ -1.52
USP54-202ENST00000413442 RPL27P61353 136 aaKnown RBP5.58□□□□□ -1.52
USP54-202ENST00000413442 PCBD1P61457 104 aa5.58□□□□□ -1.52
USP54-202ENST00000413442 RPS23P62266 143 aaKnown RBP5.58□□□□□ -1.52
USP54-202ENST00000413442 RAB1AP62820 205 aa5.58□□□□□ -1.52
USP54-202ENST00000413442 MRPS34P82930 218 aaKnown RBP5.58□□□□□ -1.52
USP54-202ENST00000413442 MXRA7P84157 204 aa5.58□□□□□ -1.52
USP54-202ENST00000413442 PLP2Q04941 152 aa5.58□□□□□ -1.52
USP54-202ENST00000413442 CAMK2DQ13557 499 aa5.58□□□□□ -1.52
USP54-202ENST00000413442 RAB35Q15286 201 aa5.58□□□□□ -1.52
USP54-202ENST00000413442 EFNB3Q15768 340 aa5.58□□□□□ -1.52
USP54-202ENST00000413442 GSG1Q2KHT4 349 aa5.58□□□□□ -1.52
USP54-202ENST00000413442 ZBED5Q49AG3 693 aa5.58□□□□□ -1.52
USP54-202ENST00000413442 ALG10Q5BKT4 473 aa5.58□□□□□ -1.52
USP54-202ENST00000413442 C10orf128Q5T292 105 aa5.58□□□□□ -1.52
USP54-202ENST00000413442 RPL13AP3Q6NVV1 102 aa5.58□□□□□ -1.52
USP54-202ENST00000413442 PGM2L1Q6PCE3 622 aa5.58□□□□□ -1.52
USP54-202ENST00000413442 ARL9Q6T311 187 aa5.58□□□□□ -1.52
USP54-202ENST00000413442 ZNF730Q6ZMV8 503 aa5.58□□□□□ -1.52
USP54-202ENST00000413442 ZNF813Q6ZN06 617 aa5.58□□□□□ -1.52
USP54-202ENST00000413442 RBM45Q8IUH3 476 aaKnown RBP5.58□□□□□ -1.52
USP54-202ENST00000413442 NKAIN4Q8IVV8 208 aa5.58□□□□□ -1.52
USP54-202ENST00000413442 ALDH16A1Q8IZ83 802 aa5.58□□□□□ -1.52
USP54-202ENST00000413442 KDM8Q8N371 416 aa5.58□□□□□ -1.52
USP54-202ENST00000413442 MUC15Q8N387 334 aa5.58□□□□□ -1.52
USP54-202ENST00000413442 OR4D11Q8NGI4 311 aa5.58□□□□□ -1.52
USP54-202ENST00000413442 NSMCE2Q96MF7 247 aa5.58□□□□□ -1.52
USP54-202ENST00000413442 HS3ST6Q96QI5 342 aa5.58□□□□□ -1.52
USP54-202ENST00000413442 SNX18Q96RF0 628 aa5.58□□□□□ -1.52
USP54-202ENST00000413442 CDRT15Q96T59 188 aa5.58□□□□□ -1.52
USP54-202ENST00000413442 WFDC6Q9BQY6 131 aa5.58□□□□□ -1.52
USP54-202ENST00000413442 RHNO1Q9BSD3 238 aa5.58□□□□□ -1.52
USP54-202ENST00000413442 TRAF4Q9BUZ4 470 aaPredicted RBP5.58□□□□□ -1.52
USP54-202ENST00000413442 MS4A5Q9H3V2 200 aa5.58□□□□□ -1.52
USP54-202ENST00000413442 MAGIXQ9H6Y5 334 aa5.58□□□□□ -1.52
USP54-202ENST00000413442 NMNAT1Q9HAN9 279 aaPredicted RBP5.58□□□□□ -1.52
USP54-202ENST00000413442 SIAEQ9HAT2 523 aa5.58□□□□□ -1.52
USP54-202ENST00000413442 IL1RAPQ9NPH3 570 aa5.58□□□□□ -1.52
USP54-202ENST00000413442 FAM53CQ9NYF3 392 aa5.58□□□□□ -1.52
USP54-202ENST00000413442 ACTR3BQ9P1U1 418 aa5.58□□□□□ -1.52
USP54-202ENST00000413442 ADAM21Q9UKJ8 722 aa5.58□□□□□ -1.52
USP54-202ENST00000413442 LAMP3Q9UQV4 416 aa5.58□□□□□ -1.52
USP54-202ENST00000413442 SNX13Q9Y5W8 968 aa5.58□□□□□ -1.52
USP54-202ENST00000413442 A0A087WUU8 490 aa5.57□□□□□ -1.52
USP54-202ENST00000413442 EFCAB9A8MZ26 197 aa5.57□□□□□ -1.52
USP54-202ENST00000413442 B2RBV5 119 aa5.57□□□□□ -1.52
USP54-202ENST00000413442 MCIDASD6RGH6 385 aa5.57□□□□□ -1.52
USP54-202ENST00000413442 M0R3G1 203 aa5.57□□□□□ -1.52
USP54-202ENST00000413442 XKRYO14609 159 aa5.57□□□□□ -1.52
USP54-202ENST00000413442 PTP4A3O75365 173 aa5.57□□□□□ -1.52
USP54-202ENST00000413442 ATP5HO75947 161 aa5.57□□□□□ -1.52
USP54-202ENST00000413442 PRSS23O95084 383 aa5.57□□□□□ -1.52
USP54-202ENST00000413442 SNAP29O95721 258 aa5.57□□□□□ -1.52
USP54-202ENST00000413442 RAB36O95755 333 aa5.57□□□□□ -1.52
USP54-202ENST00000413442 HPRP00739 348 aa5.57□□□□□ -1.52
USP54-202ENST00000413442 F12P00748 615 aaPredicted RBP5.57□□□□□ -1.52
USP54-202ENST00000413442 PLAUP00749 431 aa5.57□□□□□ -1.52
USP54-202ENST00000413442 QDPRP09417 244 aa5.57□□□□□ -1.52
USP54-202ENST00000413442 PGA4P0DJD7 388 aa5.57□□□□□ -1.52
USP54-202ENST00000413442 PGA3P0DJD8 388 aa5.57□□□□□ -1.52
USP54-202ENST00000413442 SAGP10523 405 aaPredicted RBP5.57□□□□□ -1.52
USP54-202ENST00000413442 IFI30P13284 250 aa5.57□□□□□ -1.52
USP54-202ENST00000413442 HLA-DOBP13765 273 aa5.57□□□□□ -1.52
USP54-202ENST00000413442 IFNGR1P15260 489 aa5.57□□□□□ -1.52
USP54-202ENST00000413442 CDH2P19022 906 aaPredicted RBP5.57□□□□□ -1.52
USP54-202ENST00000413442 EDNRAP25101 427 aa5.57□□□□□ -1.52
USP54-202ENST00000413442 PCSK6P29122 969 aa5.57□□□□□ -1.52
USP54-202ENST00000413442 RRM2P31350 389 aa5.57□□□□□ -1.52
USP54-202ENST00000413442 GLRXP35754 106 aa5.57□□□□□ -1.52
USP54-202ENST00000413442 SERPINF1P36955 418 aa5.57□□□□□ -1.52
USP54-202ENST00000413442 LIPAP38571 399 aa5.57□□□□□ -1.52
USP54-202ENST00000413442 RAD52P43351 418 aa5.57□□□□□ -1.52
USP54-202ENST00000413442 CENPAP49450 140 aa5.57□□□□□ -1.52
USP54-202ENST00000413442 ZNF83P51522 516 aa5.57□□□□□ -1.52
USP54-202ENST00000413442 EFNA4P52798 201 aa5.57□□□□□ -1.52
USP54-202ENST00000413442 CDH11P55287 796 aa5.57□□□□□ -1.52
USP54-202ENST00000413442 ATP5J2P56134 94 aa5.57□□□□□ -1.52
USP54-202ENST00000413442 CLRN1P58418 232 aa5.57□□□□□ -1.52
USP54-202ENST00000413442 NAAAQ02083 359 aa5.57□□□□□ -1.52
USP54-202ENST00000413442 RPL18Q07020 188 aaKnown RBP5.57□□□□□ -1.52
USP54-202ENST00000413442 TRAP1Q12931 704 aaKnown RBP5.57□□□□□ -1.52
USP54-202ENST00000413442 TRIM25Q14258 630 aaKnown RBP5.57□□□□□ -1.52
USP54-202ENST00000413442 TSC22D1Q15714 1073 aa5.57□□□□□ -1.52
USP54-202ENST00000413442 SWI5Q1ZZU3 235 aa5.57□□□□□ -1.52
USP54-202ENST00000413442 PGGHGQ32M88 737 aa5.57□□□□□ -1.52
USP54-202ENST00000413442 ARMC4Q5T2S8 1044 aa5.57□□□□□ -1.52
USP54-202ENST00000413442 FAM27BQ5VT28 67 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms