RNA–Protein interactions for RNA: ENST00000273062.6

CTDSP1-201, Transcript of CTD small phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSP1, Length 2,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-201ENST00000273062 SHPKQ9UHJ6 478 aa14.35□□□□□ -0.11
CTDSP1-201ENST00000273062 SLC35A3Q9Y2D2 325 aa14.35□□□□□ -0.11
CTDSP1-201ENST00000273062 A0A087WV48 116 aa14.34□□□□□ -0.11
CTDSP1-201ENST00000273062 LINC01553A4QN01 128 aa14.34□□□□□ -0.11
CTDSP1-201ENST00000273062 OTOL1A6NHN0 477 aaPredicted RBP14.34□□□□□ -0.11
CTDSP1-201ENST00000273062 ACOT7O00154 380 aa14.34□□□□□ -0.11
CTDSP1-201ENST00000273062 RDH16O75452 317 aa14.34□□□□□ -0.11
CTDSP1-201ENST00000273062 PGAM2P15259 253 aa14.34□□□□□ -0.11
CTDSP1-201ENST00000273062 PMELP40967 661 aa14.34□□□□□ -0.11
CTDSP1-201ENST00000273062 OMPP47874 163 aa14.34□□□□□ -0.11
CTDSP1-201ENST00000273062 CAV2P51636 162 aa14.34□□□□□ -0.11
CTDSP1-201ENST00000273062 RAB4BP61018 213 aa14.34□□□□□ -0.11
CTDSP1-201ENST00000273062 PDE7AQ13946 482 aa14.34□□□□□ -0.11
CTDSP1-201ENST00000273062 CCSMST1Q4G0I0 132 aa14.34□□□□□ -0.11
CTDSP1-201ENST00000273062 TCEAL6Q6IPX3 200 aa14.34□□□□□ -0.11
CTDSP1-201ENST00000273062 PWWP2BQ6NUJ5 590 aa14.34□□□□□ -0.11
CTDSP1-201ENST00000273062 PAPD4Q6PIY7 484 aaKnown RBP14.34□□□□□ -0.11
CTDSP1-201ENST00000273062 FAM111BQ6SJ93 734 aa14.34□□□□□ -0.11
CTDSP1-201ENST00000273062 TTLL10Q6ZVT0 673 aa14.34□□□□□ -0.11
CTDSP1-201ENST00000273062 OR1J2Q8NGS2 313 aa14.34□□□□□ -0.11
CTDSP1-201ENST00000273062 WFIKKN2Q8TEU8 576 aa14.34□□□□□ -0.11
CTDSP1-201ENST00000273062 RNF141Q8WVD5 230 aa14.34□□□□□ -0.11
CTDSP1-201ENST00000273062 SECTM1Q8WVN6 248 aa14.34□□□□□ -0.11
CTDSP1-201ENST00000273062 SAMD8Q96LT4 415 aa14.34□□□□□ -0.11
CTDSP1-201ENST00000273062 FAM212BQ9NTI7 297 aaPredicted RBP14.34□□□□□ -0.11
CTDSP1-201ENST00000273062 PARPBPQ9NWS1 579 aa14.34□□□□□ -0.11
CTDSP1-201ENST00000273062 OR5V1Q9UGF6 321 aa14.34□□□□□ -0.11
CTDSP1-201ENST00000273062 ST6GALNAC2Q9UJ37 374 aa14.34□□□□□ -0.11
CTDSP1-201ENST00000273062 FBXL4Q9UKA2 621 aa14.34□□□□□ -0.11
CTDSP1-201ENST00000273062 ATG4BQ9Y4P1 393 aa14.34□□□□□ -0.11
CTDSP1-201ENST00000273062 ACOD1A6NK06 481 aa14.34□□□□□ -0.11
CTDSP1-201ENST00000273062 GRXCR1A8MXD5 290 aa14.34□□□□□ -0.11
CTDSP1-201ENST00000273062 CDC42EP2O14613 210 aa14.34□□□□□ -0.11
CTDSP1-201ENST00000273062 TGFB1P01137 390 aa14.34□□□□□ -0.11
CTDSP1-201ENST00000273062 OR4E1P0C645 316 aa14.34□□□□□ -0.11
CTDSP1-201ENST00000273062 ALPPL2P10696 532 aa14.34□□□□□ -0.11
CTDSP1-201ENST00000273062 AQP2P41181 271 aa14.34□□□□□ -0.11
CTDSP1-201ENST00000273062 TNFRSF9Q07011 255 aa14.34□□□□□ -0.11
CTDSP1-201ENST00000273062 TDGQ13569 410 aa14.34□□□□□ -0.11
CTDSP1-201ENST00000273062 ODF4Q2M2E3 257 aa14.34□□□□□ -0.11
CTDSP1-201ENST00000273062 TP53I3Q53FA7 332 aa14.34□□□□□ -0.11
CTDSP1-201ENST00000273062 HENMT1Q5T8I9 393 aaKnown RBP14.34□□□□□ -0.11
CTDSP1-201ENST00000273062 FBXO46Q6PJ61 603 aaPredicted RBP14.34□□□□□ -0.11
CTDSP1-201ENST00000273062 ABHD13Q7L211 337 aa14.34□□□□□ -0.11
CTDSP1-201ENST00000273062 THOC6Q86W42 341 aaKnown RBP14.34□□□□□ -0.11
CTDSP1-201ENST00000273062 OR5M8Q8NGP6 311 aa14.34□□□□□ -0.11
CTDSP1-201ENST00000273062 OR10J5Q8NHC4 309 aa14.34□□□□□ -0.11
CTDSP1-201ENST00000273062 C16orf78Q8WTQ4 265 aa14.34□□□□□ -0.11
CTDSP1-201ENST00000273062 NUDCD2Q8WVJ2 157 aa14.34□□□□□ -0.11
CTDSP1-201ENST00000273062 ASB16Q96NS5 453 aa14.34□□□□□ -0.11
CTDSP1-201ENST00000273062 CPSF4LA6NMK7 179 aaKnown RBP14.33□□□□□ -0.11
CTDSP1-201ENST00000273062 IFITM5A6NNB3 132 aa14.33□□□□□ -0.11
CTDSP1-201ENST00000273062 PIN1P1O15428 100 aa14.33□□□□□ -0.11
CTDSP1-201ENST00000273062 RB1P06400 928 aa14.33□□□□□ -0.11
CTDSP1-201ENST00000273062 IL3P08700 152 aa14.33□□□□□ -0.11
CTDSP1-201ENST00000273062 BUD31P41223 144 aaPredicted RBP14.33□□□□□ -0.11
CTDSP1-201ENST00000273062 POLR2LP62875 67 aaKnown RBP14.33□□□□□ -0.11
CTDSP1-201ENST00000273062 SPNS3Q6ZMD2 512 aa14.33□□□□□ -0.11
CTDSP1-201ENST00000273062 IL34Q6ZMJ4 242 aa14.33□□□□□ -0.11
CTDSP1-201ENST00000273062 TEX19Q8NA77 164 aa14.33□□□□□ -0.11
CTDSP1-201ENST00000273062 TCTN2Q96GX1 697 aa14.33□□□□□ -0.11
CTDSP1-201ENST00000273062 PRRC1Q96M27 445 aa14.33□□□□□ -0.11
CTDSP1-201ENST00000273062 ELF4Q99607 663 aaPredicted RBP14.33□□□□□ -0.11
CTDSP1-201ENST00000273062 IL36AQ9UHA7 158 aa14.33□□□□□ -0.11
CTDSP1-201ENST00000273062 TIMM10BQ9Y5J6 103 aa14.33□□□□□ -0.11
CTDSP1-201ENST00000273062 ZNF726A6NNF4 738 aa14.33□□□□□ -0.12
CTDSP1-201ENST00000273062 TSTD3H0UI37 97 aa14.33□□□□□ -0.12
CTDSP1-201ENST00000273062 PRAMEF26H0Y7S4 382 aa14.33□□□□□ -0.12
CTDSP1-201ENST00000273062 TSPAN6O43657 245 aa14.33□□□□□ -0.12
CTDSP1-201ENST00000273062 ALOX12BO75342 701 aa14.33□□□□□ -0.12
CTDSP1-201ENST00000273062 SFTPBP07988 381 aa14.33□□□□□ -0.12
CTDSP1-201ENST00000273062 IL9P15248 144 aa14.33□□□□□ -0.12
CTDSP1-201ENST00000273062 PTGER1P34995 402 aa14.33□□□□□ -0.12
CTDSP1-201ENST00000273062 RBM34P42696 430 aaKnown RBP14.33□□□□□ -0.12
CTDSP1-201ENST00000273062 GNG10P50151 68 aa14.33□□□□□ -0.12
CTDSP1-201ENST00000273062 HSPB3Q12988 150 aa14.33□□□□□ -0.12
CTDSP1-201ENST00000273062 SMAD4Q13485 552 aaKnown RBP14.33□□□□□ -0.12
CTDSP1-201ENST00000273062 NDUFAF6Q330K2 333 aa14.33□□□□□ -0.12
CTDSP1-201ENST00000273062 MRM1Q6IN84 353 aaKnown RBP14.33□□□□□ -0.12
CTDSP1-201ENST00000273062 SZRD1Q7Z422 152 aa14.33□□□□□ -0.12
CTDSP1-201ENST00000273062 OR6X1Q8NH79 312 aa14.33□□□□□ -0.12
CTDSP1-201ENST00000273062 SULT4A1Q9BR01 284 aa14.33□□□□□ -0.12
CTDSP1-201ENST00000273062 OPN3Q9H1Y3 402 aaPredicted RBP14.33□□□□□ -0.12
CTDSP1-201ENST00000273062 OR51V1Q9H2C8 321 aa14.33□□□□□ -0.12
CTDSP1-201ENST00000273062 NOX4Q9NPH5 578 aa14.33□□□□□ -0.12
CTDSP1-201ENST00000273062 MIEF1Q9NQG6 463 aa14.33□□□□□ -0.12
CTDSP1-201ENST00000273062 SEMA4GQ9NTN9 838 aa14.33□□□□□ -0.12
CTDSP1-201ENST00000273062 DOK5Q9P104 306 aa14.33□□□□□ -0.12
CTDSP1-201ENST00000273062 MRPS23Q9Y3D9 190 aaKnown RBP14.33□□□□□ -0.12
CTDSP1-201ENST00000273062 A0A1B0GTI1 187 aa14.32□□□□□ -0.12
CTDSP1-201ENST00000273062 KLK1P06870 262 aa14.32□□□□□ -0.12
CTDSP1-201ENST00000273062 SLC25A4P12235 298 aa14.32□□□□□ -0.12
CTDSP1-201ENST00000273062 PDHA2P29803 388 aa14.32□□□□□ -0.12
CTDSP1-201ENST00000273062 PBLDP30039 288 aaPredicted RBP14.32□□□□□ -0.12
CTDSP1-201ENST00000273062 MRPS10P82664 201 aaKnown RBP14.32□□□□□ -0.12
CTDSP1-201ENST00000273062 PARS2Q7L3T8 475 aaKnown RBP14.32□□□□□ -0.12
CTDSP1-201ENST00000273062 EID2Q8N6I1 236 aa14.32□□□□□ -0.12
CTDSP1-201ENST00000273062 SEMA6DQ8NFY4 1073 aa14.32□□□□□ -0.12
CTDSP1-201ENST00000273062 S100A16Q96FQ6 103 aaKnown RBP14.32□□□□□ -0.12
CTDSP1-201ENST00000273062 GPR61Q9BZJ8 451 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms