RNA–Protein interactions for RNA: ENSMUST00000113440.1

Ccdc88b-201, Transcript of Coiled-coil domain-containing protein 88B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc88b, Length 4,959 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88b-201ENSMUST00000113440 Cited4Q9WUL8 182 aa14.39□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Gm3727J3QM54 205 aa14.39□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Vmn2r28L7N203 852 aa14.39□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Bet1O35623 118 aa14.39□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Slc6a18O88576 615 aa14.39□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 P01648 108 aa14.39□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Hoxd4P10628 250 aa14.39□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Gstm2P15626 218 aa14.39□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Map2k4P47809 397 aa14.39□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 RpiaP47968 303 aa14.39□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Zfp82Q6P9Y7 530 aa14.39□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 NelfaQ8BG30 530 aa14.39□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Kctd20Q8CDD8 419 aa14.39□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 4921517D22RikQ8CET0 269 aa14.39□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Olfr518Q8VEW1 333 aa14.39□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Vmn2r107E9PZJ7 861 aa14.39□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 BC117090L7N257 96 aa14.39□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 PtgdsO09114 189 aa14.39□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 SrcP05480 541 aa14.39□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 RetP35546 1115 aa14.39□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Foxa1P35582 468 aa14.39□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Etv1P41164 477 aa14.39□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Sult4a1P63046 284 aa14.39□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Mmp7Q10738 264 aa14.39□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Vmn1r196Q5SVD5 301 aa14.39□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Klf4Q60793 483 aa14.39□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 EngQ63961 653 aa14.39□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Zfp866Q6PGD2 520 aa14.39□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Olfr1385Q7TQT1 309 aa14.39□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Olfr1115Q7TR53 326 aa14.39□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Mboat2Q8R3I2 519 aa14.39□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Etv5Q9CXC9 510 aa14.39□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Obp1bA2AEP0 171 aa14.39□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Gm14743A2BHD2 171 aa14.39□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Gm498D3YYH9 372 aa14.39□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 HpnO35453 436 aa14.39□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Tubal3Q3UX10 446 aa14.39□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Art1Q60935 325 aa14.39□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Dio1Q61153 257 aa14.39□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Rsl1Q7M6Y1 485 aa14.39□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Olfr1106Q7TR57 312 aa14.39□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 C1rbQ8CFG9 706 aa14.39□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Esco2Q8CIB9 592 aaKnown RBP14.39□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Il23rQ8K4B4 644 aa14.39□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Vmn1r74Q8R290 304 aa14.39□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Dcp1aQ91YD3 602 aa14.39□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Ubqln4Q99NB8 596 aa14.39□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Slc46a3Q9DC26 460 aa14.39□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Tomm20Q9DCC8 145 aa14.39□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Olfr948Q9EQ95 321 aa14.39□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Socs6Q9JLY0 533 aa14.39□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Psmb3Q9R1P1 205 aa14.39□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Gm364A2AFI6 671 aa14.38□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Olfr740E9PV79 311 aa14.38□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Phb2O35129 299 aaKnown RBP14.38□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 P2ry2P35383 373 aa14.38□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Rsu1Q01730 277 aa14.38□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Lrrc20Q8CI70 184 aa14.38□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Hspa12aQ8K0U4 675 aa14.38□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 DhrsxQ8VBZ0 335 aa14.38□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Olfr1378Q8VGH0 315 aa14.38□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Olfr447Q8VGP6 310 aa14.38□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Oasl1Q8VI94 511 aa14.38□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 C1galt1Q9JJ06 363 aa14.38□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Dmrt1Q9QZ59 374 aa14.38□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 PrknQ9WVS6 464 aa14.38□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Mettl8A2AUU0 281 aa14.38□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Dnmt3bO88509 859 aa14.38□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Muc13P19467 573 aa14.38□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 BB287469Q3UT53 144 aa14.38□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Acsm4Q80W40 580 aa14.38□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Prss50Q8BLH5 439 aa14.38□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 EloaQ8CB77 773 aaKnown RBP14.38□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Mrm1Q99J25 320 aa14.38□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Ints12Q9D168 461 aa14.38□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Dok3Q9QZK7 444 aa14.38□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 MeltfQ9R0R1 738 aa14.38□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Usp18Q9WTV6 368 aa14.38□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Iglc4A0A0G2JEK5 104 aa14.38□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Olfr613E9PYB4 317 aa14.38□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Htr2aP35363 471 aa14.38□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 SgcbP82349 320 aa14.38□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Igsf5Q7TSN7 370 aa14.38□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Slc25a32Q8BMG8 316 aa14.38□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Vmn1r85Q8VIB8 308 aa14.38□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Ppp1r35Q9D8C8 260 aa14.38□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Lin37Q9D8N6 246 aa14.38□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Lao1B1ARV3 523 aa14.37□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Mettl11bB2RXM4 283 aa14.37□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Gm7714E9Q079 131 aa14.37□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Nfatc1O88942 717 aa14.37□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Agtr1bP29755 359 aa14.37□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 CtrcQ3SYP2 268 aa14.37□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Dtx3lQ3UIR3 748 aa14.37□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Sdhaf2Q8C6I2 164 aa14.37□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Vmn1r32Q8R2D9 302 aa14.37□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Dusp15Q8R4V2 235 aa14.37□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Olfr1043Q8VFK4 314 aa14.37□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Olfr870Q8VGG4 311 aa14.37□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Acss1Q99NB1 682 aa14.37□□□□□ -0.11
Retrieved 100 of 22,080 RNA–protein pairs in 55.5 ms