Protein–RNA interactions for Protein: P35546

Ret, Proto-oncogene tyrosine-protein kinase receptor Ret, mousemouse

Predictions only

Length 1,115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RetP35546 Gm25239-201ENSMUST00000174915 86 ntBASIC35.15■■■■□ 3.22
RetP35546 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC32.67■■■□□ 2.82
RetP35546 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
RetP35546 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
RetP35546 Gm24109-201ENSMUST00000175489 103 ntBASIC30.64■■■□□ 2.5
RetP35546 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
RetP35546 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC30.5■■■□□ 2.47
RetP35546 Gm15042-201ENSMUST00000120212 883 ntBASIC30.39■■■□□ 2.46
RetP35546 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
RetP35546 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC29.7■■■□□ 2.35
RetP35546 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
RetP35546 Gm15045-201ENSMUST00000117359 883 ntBASIC29.59■■■□□ 2.33
RetP35546 Psd-208ENSMUST00000224556 2034 ntBASIC29.45■■■□□ 2.3
RetP35546 Gm23366-201ENSMUST00000175022 89 ntBASIC29.36■■■□□ 2.29
RetP35546 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
RetP35546 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
RetP35546 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC28.79■■■□□ 2.2
RetP35546 AC153911.1-202ENSMUST00000218534 1034 ntBASIC28.7■■■□□ 2.18
RetP35546 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
RetP35546 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC28.49■■■□□ 2.15
RetP35546 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC28.48■■■□□ 2.15
RetP35546 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
RetP35546 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
RetP35546 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC28.38■■■□□ 2.13
RetP35546 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
RetP35546 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
RetP35546 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
RetP35546 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
RetP35546 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
RetP35546 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC28.16■■■□□ 2.1
RetP35546 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
RetP35546 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC28.04■■■□□ 2.08
RetP35546 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
RetP35546 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC27.95■■■□□ 2.06
RetP35546 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
RetP35546 Gm25238-201ENSMUST00000174914 89 ntBASIC27.83■■■□□ 2.05
RetP35546 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC27.78■■■□□ 2.04
RetP35546 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC27.76■■■□□ 2.03
RetP35546 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
RetP35546 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
RetP35546 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC27.71■■■□□ 2.03
RetP35546 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC27.67■■■□□ 2.02
RetP35546 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC27.64■■■□□ 2.02
RetP35546 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC27.48■■□□□ 1.99
RetP35546 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
RetP35546 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC27.42■■□□□ 1.98
RetP35546 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
RetP35546 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC27.34■■□□□ 1.97
RetP35546 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
RetP35546 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
RetP35546 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
RetP35546 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC27.19■■□□□ 1.94
RetP35546 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC27.1■■□□□ 1.93
RetP35546 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC27.02■■□□□ 1.92
RetP35546 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC27.01■■□□□ 1.92
RetP35546 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC26.97■■□□□ 1.91
RetP35546 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
RetP35546 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC26.96■■□□□ 1.91
RetP35546 Gm25262-201ENSMUST00000174934 133 ntBASIC26.93■■□□□ 1.9
RetP35546 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC26.92■■□□□ 1.9
RetP35546 Gm10524-201ENSMUST00000181931 1893 ntBASIC26.91■■□□□ 1.9
RetP35546 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
RetP35546 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
RetP35546 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
RetP35546 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
RetP35546 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC26.71■■□□□ 1.87
RetP35546 Gm27325-201ENSMUST00000175467 74 ntBASIC26.54■■□□□ 1.84
RetP35546 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC26.54■■□□□ 1.84
RetP35546 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
RetP35546 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC26.47■■□□□ 1.83
RetP35546 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
RetP35546 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
RetP35546 Gm26115-201ENSMUST00000175605 87 ntBASIC26.41■■□□□ 1.82
RetP35546 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC26.34■■□□□ 1.81
RetP35546 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
RetP35546 Rab21-202ENSMUST00000218831 843 ntBASIC26.33■■□□□ 1.81
RetP35546 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC26.31■■□□□ 1.8
RetP35546 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
RetP35546 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC26.29■■□□□ 1.8
RetP35546 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC26.23■■□□□ 1.79
RetP35546 CT025624.2-201ENSMUST00000223609 1909 ntBASIC26.22■■□□□ 1.79
RetP35546 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
RetP35546 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC26.19■■□□□ 1.78
RetP35546 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
RetP35546 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
RetP35546 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
RetP35546 Gm8109-201ENSMUST00000194076 746 ntBASIC26.16■■□□□ 1.78
RetP35546 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
RetP35546 Gm42596-201ENSMUST00000196305 1958 ntBASIC26.08■■□□□ 1.77
RetP35546 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
RetP35546 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC26.05■■□□□ 1.76
RetP35546 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
RetP35546 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC26.01■■□□□ 1.75
RetP35546 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC26.01■■□□□ 1.75
RetP35546 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC25.99■■□□□ 1.75
RetP35546 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
RetP35546 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC25.97■■□□□ 1.75
RetP35546 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
RetP35546 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC25.92■■□□□ 1.74
RetP35546 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms