RNA–Protein interactions for RNA: ENST00000639470.1

COLCA2-207, Transcript of colorectal cancer associated 2, humanhuman

TSL 1 (best)

Gene COLCA2, Length 1,207 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-207ENST00000639470 FAM168AQ92567 244 aa14.18□□□□□ -0.14
COLCA2-207ENST00000639470 ZNF75AQ96N20 296 aa14.18□□□□□ -0.14
COLCA2-207ENST00000639470 VRK1Q99986 396 aaPredicted RBP14.18□□□□□ -0.14
COLCA2-207ENST00000639470 KCNS3Q9BQ31 491 aa14.18□□□□□ -0.14
COLCA2-207ENST00000639470 ULBP2Q9BZM5 246 aa14.18□□□□□ -0.14
COLCA2-207ENST00000639470 B3GNT2Q9NY97 397 aa14.18□□□□□ -0.14
COLCA2-207ENST00000639470 SH3GLB1Q9Y371 365 aa14.18□□□□□ -0.14
COLCA2-207ENST00000639470 CORINQ9Y5Q5 1042 aa14.18□□□□□ -0.14
COLCA2-207ENST00000639470 ABCA1O95477 2261 aa14.17□□□□□ -0.14
COLCA2-207ENST00000639470 ANK3Q12955 4377 aaKnown RBP14.17□□□□□ -0.14
COLCA2-207ENST00000639470 TMEM129A0AVI4 362 aa14.17□□□□□ -0.14
COLCA2-207ENST00000639470 SH3PXD2BA1X283 911 aa14.17□□□□□ -0.14
COLCA2-207ENST00000639470 TRAPPC13A5PLN9 417 aa14.17□□□□□ -0.14
COLCA2-207ENST00000639470 PIP5K1CO60331 668 aa14.17□□□□□ -0.14
COLCA2-207ENST00000639470 FMO6PO60774 539 aa14.17□□□□□ -0.14
COLCA2-207ENST00000639470 VIMP08670 466 aaKnown RBP14.17□□□□□ -0.14
COLCA2-207ENST00000639470 EFNA4P52798 201 aa14.17□□□□□ -0.14
COLCA2-207ENST00000639470 ARFIP2P53365 341 aa14.17□□□□□ -0.14
COLCA2-207ENST00000639470 UGT2B15P54855 530 aa14.17□□□□□ -0.14
COLCA2-207ENST00000639470 SH3BGRP55822 239 aaPredicted RBP14.17□□□□□ -0.14
COLCA2-207ENST00000639470 TMEM249Q2WGJ8 235 aa14.17□□□□□ -0.14
COLCA2-207ENST00000639470 SWT1Q5T5J6 900 aaKnown RBP14.17□□□□□ -0.14
COLCA2-207ENST00000639470 METTL21CQ5VZV1 264 aa14.17□□□□□ -0.14
COLCA2-207ENST00000639470 DEF8Q6ZN54 512 aa14.17□□□□□ -0.14
COLCA2-207ENST00000639470 CCDC80Q76M96 950 aa14.17□□□□□ -0.14
COLCA2-207ENST00000639470 PATL1Q86TB9 770 aaKnown RBP14.17□□□□□ -0.14
COLCA2-207ENST00000639470 CDK20Q8IZL9 346 aa14.17□□□□□ -0.14
COLCA2-207ENST00000639470 BHLHE22Q8NFJ8 381 aaPredicted RBP14.17□□□□□ -0.14
COLCA2-207ENST00000639470 SLC26A7Q8TE54 656 aa14.17□□□□□ -0.14
COLCA2-207ENST00000639470 ZNF583Q96ND8 569 aa14.17□□□□□ -0.14
COLCA2-207ENST00000639470 ZNF426Q9BUY5 554 aa14.17□□□□□ -0.14
COLCA2-207ENST00000639470 C20orf141Q9NUB4 165 aa14.17□□□□□ -0.14
COLCA2-207ENST00000639470 NOX1Q9Y5S8 564 aa14.17□□□□□ -0.14
COLCA2-207ENST00000639470 hCG_2039718K7EN88 272 aa14.16□□□□□ -0.14
COLCA2-207ENST00000639470 TP53P04637 393 aaPredicted RBP14.16□□□□□ -0.14
COLCA2-207ENST00000639470 C8BP07358 591 aa14.16□□□□□ -0.14
COLCA2-207ENST00000639470 TROVE2P10155 538 aaKnown RBP eCLIP14.16□□□□□ -0.14
COLCA2-207ENST00000639470 ZNF16P17020 682 aaPredicted RBP14.16□□□□□ -0.14
COLCA2-207ENST00000639470 MYBPC1Q00872 1141 aa14.16□□□□□ -0.14
COLCA2-207ENST00000639470 CHRNB3Q05901 458 aa14.16□□□□□ -0.14
COLCA2-207ENST00000639470 PIN1Q13526 163 aaPredicted RBP14.16□□□□□ -0.14
COLCA2-207ENST00000639470 CYLC2Q14093 348 aaPredicted RBP14.16□□□□□ -0.14
COLCA2-207ENST00000639470 TTC33Q6PID6 262 aaPredicted RBP14.16□□□□□ -0.14
COLCA2-207ENST00000639470 LRFN4Q6PJG9 635 aa14.16□□□□□ -0.14
COLCA2-207ENST00000639470 SLC35D2Q76EJ3 337 aa14.16□□□□□ -0.14
COLCA2-207ENST00000639470 PXKQ7Z7A4 578 aa14.16□□□□□ -0.14
COLCA2-207ENST00000639470 C10orf82Q8WW14 230 aa14.16□□□□□ -0.14
COLCA2-207ENST00000639470 RCN3Q96D15 328 aa14.16□□□□□ -0.14
COLCA2-207ENST00000639470 FOXN4Q96NZ1 517 aa14.16□□□□□ -0.14
COLCA2-207ENST00000639470 FOXB1Q99853 325 aa14.16□□□□□ -0.14
COLCA2-207ENST00000639470 FZR1Q9UM11 496 aa14.16□□□□□ -0.14
COLCA2-207ENST00000639470 POFUT2Q9Y2G5 429 aa14.16□□□□□ -0.14
COLCA2-207ENST00000639470 PMF1-BGLAPU3KQ54 211 aa14.16□□□□□ -0.14
COLCA2-207ENST00000639470 ARFGEF3Q5TH69 2177 aa14.15□□□□□ -0.14
COLCA2-207ENST00000639470 IGHV4-61A0A0C4DH41 118 aa14.15□□□□□ -0.14
COLCA2-207ENST00000639470 ZNF726A6NNF4 738 aa14.15□□□□□ -0.14
COLCA2-207ENST00000639470 LYNX1G3V0Z9 82 aa14.15□□□□□ -0.14
COLCA2-207ENST00000639470 RNF13O43567 381 aa14.15□□□□□ -0.14
COLCA2-207ENST00000639470 AKAP8O43823 692 aaKnown RBP14.15□□□□□ -0.14
COLCA2-207ENST00000639470 F12P00748 615 aaPredicted RBP14.15□□□□□ -0.14
COLCA2-207ENST00000639470 F13BP05160 661 aa14.15□□□□□ -0.14
COLCA2-207ENST00000639470 IGHV4-31P0DP07 118 aa14.15□□□□□ -0.14
COLCA2-207ENST00000639470 LYNX1P0DP58 116 aa14.15□□□□□ -0.14
COLCA2-207ENST00000639470 UMPSP11172 480 aa14.15□□□□□ -0.14
COLCA2-207ENST00000639470 GIPRP48546 466 aa14.15□□□□□ -0.14
COLCA2-207ENST00000639470 PTDSS1P48651 473 aaKnown RBP14.15□□□□□ -0.14
COLCA2-207ENST00000639470 CSNK1A1P48729 337 aa14.15□□□□□ -0.14
COLCA2-207ENST00000639470 SNRPD2P62316 118 aaKnown RBP14.15□□□□□ -0.14
COLCA2-207ENST00000639470 SNTB2Q13425 540 aaKnown RBP14.15□□□□□ -0.14
COLCA2-207ENST00000639470 GGTLC2Q14390 218 aa14.15□□□□□ -0.14
COLCA2-207ENST00000639470 RAB39AQ14964 217 aa14.15□□□□□ -0.14
COLCA2-207ENST00000639470 MMEL1Q495T6 779 aa14.15□□□□□ -0.14
COLCA2-207ENST00000639470 LRRC23Q53EV4 343 aaPredicted RBP14.15□□□□□ -0.14
COLCA2-207ENST00000639470 C6orf52Q5T4I8 152 aa14.15□□□□□ -0.14
COLCA2-207ENST00000639470 SPATA21Q7Z572 469 aa14.15□□□□□ -0.14
COLCA2-207ENST00000639470 SKA3Q8IX90 412 aa14.15□□□□□ -0.14
COLCA2-207ENST00000639470 ARIH2OSQ8N7S6 290 aa14.15□□□□□ -0.14
COLCA2-207ENST00000639470 ANKK1Q8NFD2 765 aa14.15□□□□□ -0.14
COLCA2-207ENST00000639470 MOSPD2Q8NHP6 518 aa14.15□□□□□ -0.14
COLCA2-207ENST00000639470 TMEM54Q969K7 222 aa14.15□□□□□ -0.14
COLCA2-207ENST00000639470 TNFRSF13CQ96RJ3 184 aa14.15□□□□□ -0.14
COLCA2-207ENST00000639470 SH3GL3Q99963 347 aa14.15□□□□□ -0.14
COLCA2-207ENST00000639470 ECSITQ9BQ95 431 aa14.15□□□□□ -0.14
COLCA2-207ENST00000639470 SIKE1Q9BRV8 207 aa14.15□□□□□ -0.14
COLCA2-207ENST00000639470 SOX7Q9BT81 388 aa14.15□□□□□ -0.14
COLCA2-207ENST00000639470 PCDHAC1Q9H158 963 aa14.15□□□□□ -0.14
COLCA2-207ENST00000639470 TPK1Q9H3S4 243 aa14.15□□□□□ -0.14
COLCA2-207ENST00000639470 PLK3Q9H4B4 646 aa14.15□□□□□ -0.14
COLCA2-207ENST00000639470 CMTM6Q9NX76 183 aa14.15□□□□□ -0.14
COLCA2-207ENST00000639470 MYEF2Q9P2K5 600 aaKnown RBP14.15□□□□□ -0.14
COLCA2-207ENST00000639470 SNX13Q9Y5W8 968 aa14.15□□□□□ -0.14
COLCA2-207ENST00000639470 HEATR1Q9H583 2144 aaKnown RBP14.15□□□□□ -0.14
COLCA2-207ENST00000639470 BLOC1S5-TXNDC5H3BN57 136 aa14.14□□□□□ -0.15
COLCA2-207ENST00000639470 MT-ATP6P00846 226 aa14.14□□□□□ -0.15
COLCA2-207ENST00000639470 ASAH2BP0C7U1 165 aa14.14□□□□□ -0.15
COLCA2-207ENST00000639470 CCL2P13500 99 aa14.14□□□□□ -0.15
COLCA2-207ENST00000639470 ZNF14P17017 642 aaPredicted RBP14.14□□□□□ -0.15
COLCA2-207ENST00000639470 YAP1P46937 504 aaKnown RBP14.14□□□□□ -0.15
COLCA2-207ENST00000639470 LOXL1Q08397 574 aaPredicted RBP14.14□□□□□ -0.15
COLCA2-207ENST00000639470 GSG1Q2KHT4 349 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms