RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 MPGP29372 298 aa15.31■□□□□ 0.04
SHKBP1-203ENST00000594298 GRPRP30550 384 aa15.31■□□□□ 0.04
SHKBP1-203ENST00000594298 SLC25A3Q00325 362 aa15.31■□□□□ 0.04
SHKBP1-203ENST00000594298 TSPO2Q5TGU0 170 aa15.31■□□□□ 0.04
SHKBP1-203ENST00000594298 GLYATQ6IB77 296 aa15.31■□□□□ 0.04
SHKBP1-203ENST00000594298 FKBP9P1Q75LS8 142 aa15.31■□□□□ 0.04
SHKBP1-203ENST00000594298 CBLL1Q75N03 491 aa15.31■□□□□ 0.04
SHKBP1-203ENST00000594298 H1FNTQ75WM6 255 aaPredicted RBP15.31■□□□□ 0.04
SHKBP1-203ENST00000594298 ADPRHL1Q8NDY3 354 aa15.31■□□□□ 0.04
SHKBP1-203ENST00000594298 CDRT15Q96T59 188 aa15.31■□□□□ 0.04
SHKBP1-203ENST00000594298 GMPR2Q9P2T1 348 aaKnown RBP15.31■□□□□ 0.04
SHKBP1-203ENST00000594298 OR6C65A6NJZ3 312 aa15.3■□□□□ 0.04
SHKBP1-203ENST00000594298 SERPINA1P01009 418 aa15.3■□□□□ 0.04
SHKBP1-203ENST00000594298 IFNW1P05000 195 aa15.3■□□□□ 0.04
SHKBP1-203ENST00000594298 ZNF43P17038 809 aa15.3■□□□□ 0.04
SHKBP1-203ENST00000594298 TNFRSF1BP20333 461 aa15.3■□□□□ 0.04
SHKBP1-203ENST00000594298 OR1E2P47887 323 aa15.3■□□□□ 0.04
SHKBP1-203ENST00000594298 PRPS1P60891 318 aa15.3■□□□□ 0.04
SHKBP1-203ENST00000594298 C1DQ13901 141 aaKnown RBP15.3■□□□□ 0.04
SHKBP1-203ENST00000594298 SWI5Q1ZZU3 235 aa15.3■□□□□ 0.04
SHKBP1-203ENST00000594298 IFI44LQ53G44 452 aa15.3■□□□□ 0.04
SHKBP1-203ENST00000594298 C9orf135Q5VTT2 229 aa15.3■□□□□ 0.04
SHKBP1-203ENST00000594298 AAED1Q7RTV5 226 aa15.3■□□□□ 0.04
SHKBP1-203ENST00000594298 SCAIQ8N9R8 606 aa15.3■□□□□ 0.04
SHKBP1-203ENST00000594298 BCAS4Q8TDM0 211 aa15.3■□□□□ 0.04
SHKBP1-203ENST00000594298 GEMIN6Q8WXD5 167 aaKnown RBP15.3■□□□□ 0.04
SHKBP1-203ENST00000594298 OXGR1Q96P68 337 aa15.3■□□□□ 0.04
SHKBP1-203ENST00000594298 RIMS3Q9UJD0 308 aa15.3■□□□□ 0.04
SHKBP1-203ENST00000594298 LOC102725191A0A1B0GVB3 256 aa15.29■□□□□ 0.04
SHKBP1-203ENST00000594298 B2RBV5 119 aa15.29■□□□□ 0.04
SHKBP1-203ENST00000594298 VWC2LB2RUY7 222 aa15.29■□□□□ 0.04
SHKBP1-203ENST00000594298 M0R082 166 aa15.29■□□□□ 0.04
SHKBP1-203ENST00000594298 AKAP8O43823 692 aaKnown RBP15.29■□□□□ 0.04
SHKBP1-203ENST00000594298 WNT11O96014 354 aa15.29■□□□□ 0.04
SHKBP1-203ENST00000594298 BGLAPP02818 100 aa15.29■□□□□ 0.04
SHKBP1-203ENST00000594298 HSD17B1P14061 328 aa15.29■□□□□ 0.04
SHKBP1-203ENST00000594298 NQO1P15559 274 aaKnown RBP15.29■□□□□ 0.04
SHKBP1-203ENST00000594298 CALB2P22676 271 aa15.29■□□□□ 0.04
SHKBP1-203ENST00000594298 RBM34P42696 430 aaKnown RBP15.29■□□□□ 0.04
SHKBP1-203ENST00000594298 GZMKP49863 264 aa15.29■□□□□ 0.04
SHKBP1-203ENST00000594298 P2RY4P51582 365 aa15.29■□□□□ 0.04
SHKBP1-203ENST00000594298 LSM11P83369 360 aaKnown RBP eCLIP15.29■□□□□ 0.04
SHKBP1-203ENST00000594298 IL1RL1Q01638 556 aa15.29■□□□□ 0.04
SHKBP1-203ENST00000594298 ST3GAL3Q11203 375 aa15.29■□□□□ 0.04
SHKBP1-203ENST00000594298 MST1LQ2TV78 715 aa15.29■□□□□ 0.04
SHKBP1-203ENST00000594298 CREB3L2Q70SY1 520 aa15.29■□□□□ 0.04
SHKBP1-203ENST00000594298 ABHD12BQ7Z5M8 362 aaPredicted RBP15.29■□□□□ 0.04
SHKBP1-203ENST00000594298 DEFB107AQ8IZN7 70 aa15.29■□□□□ 0.04
SHKBP1-203ENST00000594298 POMGNT2Q8NAT1 580 aa15.29■□□□□ 0.04
SHKBP1-203ENST00000594298 ZNF417Q8TAU3 575 aa15.29■□□□□ 0.04
SHKBP1-203ENST00000594298 ZNF587Q96SQ5 575 aaPredicted RBP15.29■□□□□ 0.04
SHKBP1-203ENST00000594298 SHARPINQ9H0F6 387 aa15.29■□□□□ 0.04
SHKBP1-203ENST00000594298 OBP2BQ9NPH6 170 aa15.29■□□□□ 0.04
SHKBP1-203ENST00000594298 EGFL7Q9UHF1 273 aa15.29■□□□□ 0.04
SHKBP1-203ENST00000594298 MAGEL2Q9UJ55 1249 aa15.29■□□□□ 0.04
SHKBP1-203ENST00000594298 SAMD4AQ9UPU9 718 aaKnown RBP15.29■□□□□ 0.04
SHKBP1-203ENST00000594298 HTR3EA5X5Y0 456 aa15.28■□□□□ 0.04
SHKBP1-203ENST00000594298 ATP6V1G2-DDX39BF2Z307 99 aa15.28■□□□□ 0.04
SHKBP1-203ENST00000594298 NDUFS8O00217 210 aa15.28■□□□□ 0.04
SHKBP1-203ENST00000594298 LMX1BO60663 402 aa15.28■□□□□ 0.04
SHKBP1-203ENST00000594298 OR6A2O95222 327 aa15.28■□□□□ 0.04
SHKBP1-203ENST00000594298 LYPD3O95274 346 aa15.28■□□□□ 0.04
SHKBP1-203ENST00000594298 THY1P04216 161 aa15.28■□□□□ 0.04
SHKBP1-203ENST00000594298 HIST1H2ABP04908 130 aa15.28■□□□□ 0.04
SHKBP1-203ENST00000594298 NCK1P16333 377 aa15.28■□□□□ 0.04
SHKBP1-203ENST00000594298 ZNF16P17020 682 aaPredicted RBP15.28■□□□□ 0.04
SHKBP1-203ENST00000594298 CBLP22681 906 aa15.28■□□□□ 0.04
SHKBP1-203ENST00000594298 PAX7P23759 505 aa15.28■□□□□ 0.04
SHKBP1-203ENST00000594298 PMS2P3Q13401 168 aa15.28■□□□□ 0.04
SHKBP1-203ENST00000594298 PIN1Q13526 163 aaPredicted RBP15.28■□□□□ 0.04
SHKBP1-203ENST00000594298 KLHL24Q6TFL4 600 aa15.28■□□□□ 0.04
SHKBP1-203ENST00000594298 HIST3H2AQ7L7L0 130 aa15.28■□□□□ 0.04
SHKBP1-203ENST00000594298 CYP4Z1Q86W10 505 aa15.28■□□□□ 0.04
SHKBP1-203ENST00000594298 ARHGAP24Q8N264 748 aa15.28■□□□□ 0.04
SHKBP1-203ENST00000594298 RNF148Q8N7C7 305 aa15.28■□□□□ 0.04
SHKBP1-203ENST00000594298 ZIC4Q8N9L1 334 aa15.28■□□□□ 0.04
SHKBP1-203ENST00000594298 HIST1H2ACQ93077 130 aa15.28■□□□□ 0.04
SHKBP1-203ENST00000594298 HSH2DQ96JZ2 352 aa15.28■□□□□ 0.04
SHKBP1-203ENST00000594298 PRRC1Q96M27 445 aa15.28■□□□□ 0.04
SHKBP1-203ENST00000594298 GORASP2Q9H8Y8 452 aa15.28■□□□□ 0.04
SHKBP1-203ENST00000594298 MRPL39Q9NYK5 338 aaKnown RBP15.28■□□□□ 0.04
SHKBP1-203ENST00000594298 MOKQ9UQ07 419 aa15.28■□□□□ 0.04
SHKBP1-203ENST00000594298 FKBP7Q9Y680 259 aa15.28■□□□□ 0.04
SHKBP1-203ENST00000594298 KRT33AO76009 404 aa15.27■□□□□ 0.04
SHKBP1-203ENST00000594298 LY6HO94772 140 aa15.27■□□□□ 0.04
SHKBP1-203ENST00000594298 TCN1P20061 433 aaPredicted RBP15.27■□□□□ 0.04
SHKBP1-203ENST00000594298 PDLIM4P50479 330 aa15.27■□□□□ 0.04
SHKBP1-203ENST00000594298 KRTAP24-1Q3LI83 254 aa15.27■□□□□ 0.04
SHKBP1-203ENST00000594298 VTCN1Q7Z7D3 282 aa15.27■□□□□ 0.04
SHKBP1-203ENST00000594298 EPHX4Q8IUS5 362 aa15.27■□□□□ 0.04
SHKBP1-203ENST00000594298 UEVLDQ8IX04 471 aa15.27■□□□□ 0.04
SHKBP1-203ENST00000594298 OR5J2Q8NH18 312 aa15.27■□□□□ 0.04
SHKBP1-203ENST00000594298 TMEM239Q8WW34 195 aa15.27■□□□□ 0.04
SHKBP1-203ENST00000594298 ZNF385AQ96PM9 386 aaKnown RBP15.27■□□□□ 0.04
SHKBP1-203ENST00000594298 PRSS27Q9BQR3 290 aa15.27■□□□□ 0.04
SHKBP1-203ENST00000594298 ZNF426Q9BUY5 554 aa15.27■□□□□ 0.04
SHKBP1-203ENST00000594298 FNDC11Q9BVV2 318 aa15.27■□□□□ 0.04
SHKBP1-203ENST00000594298 NANSQ9NR45 359 aa15.27■□□□□ 0.04
SHKBP1-203ENST00000594298 DCAF13Q9NV06 445 aaKnown RBP15.27■□□□□ 0.04
SHKBP1-203ENST00000594298 CD300AQ9UGN4 299 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms