RNA–Protein interactions for RNA: ENST00000490476.1

SSX2IP-208, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 3

Gene SSX2IP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-208ENST00000490476 IGLV3-22A0A075B6J6 115 aa3.82□□□□□ -1.8
SSX2IP-208ENST00000490476 ZNF840PA6NDX5 716 aa3.82□□□□□ -1.8
SSX2IP-208ENST00000490476 C21orf140B9A014 251 aa3.82□□□□□ -1.8
SSX2IP-208ENST00000490476 K7EQM0 130 aa3.82□□□□□ -1.8
SSX2IP-208ENST00000490476 CLDN5O00501 218 aa3.82□□□□□ -1.8
SSX2IP-208ENST00000490476 OR1F1O43749 312 aa3.82□□□□□ -1.8
SSX2IP-208ENST00000490476 TBX19O60806 448 aa3.82□□□□□ -1.8
SSX2IP-208ENST00000490476 STX11O75558 287 aa3.82□□□□□ -1.8
SSX2IP-208ENST00000490476 THRAP10827 490 aa3.82□□□□□ -1.8
SSX2IP-208ENST00000490476 PSMA2P25787 234 aa3.82□□□□□ -1.8
SSX2IP-208ENST00000490476 CHI3L1P36222 383 aaPredicted RBP3.82□□□□□ -1.8
SSX2IP-208ENST00000490476 PSMD8P48556 350 aa3.82□□□□□ -1.8
SSX2IP-208ENST00000490476 RGS4P49798 205 aa3.82□□□□□ -1.8
SSX2IP-208ENST00000490476 SLC10A1Q14973 349 aa3.82□□□□□ -1.8
SSX2IP-208ENST00000490476 XKR4Q5GH76 650 aa3.82□□□□□ -1.8
SSX2IP-208ENST00000490476 ZNF506Q5JVG8 444 aa3.82□□□□□ -1.8
SSX2IP-208ENST00000490476 LINC00242Q5T6M2 205 aa3.82□□□□□ -1.8
SSX2IP-208ENST00000490476 TMEM215Q68D42 235 aa3.82□□□□□ -1.8
SSX2IP-208ENST00000490476 ZNF343Q6P1L6 599 aa3.82□□□□□ -1.8
SSX2IP-208ENST00000490476 CASC1Q6TDU7 716 aa3.82□□□□□ -1.8
SSX2IP-208ENST00000490476 Q6ZSR6 202 aa3.82□□□□□ -1.8
SSX2IP-208ENST00000490476 GPRIN3Q6ZVF9 776 aa3.82□□□□□ -1.8
SSX2IP-208ENST00000490476 CYS1Q717R9 158 aa3.82□□□□□ -1.8
SSX2IP-208ENST00000490476 LRRC70Q7Z2Q7 622 aa3.82□□□□□ -1.8
SSX2IP-208ENST00000490476 SLC25A42Q86VD7 318 aa3.82□□□□□ -1.8
SSX2IP-208ENST00000490476 MMAAQ8IVH4 418 aaKnown RBP3.82□□□□□ -1.8
SSX2IP-208ENST00000490476 OR5AU1Q8NGC0 362 aa3.82□□□□□ -1.8
SSX2IP-208ENST00000490476 FBXO30Q8TB52 745 aa3.82□□□□□ -1.8
SSX2IP-208ENST00000490476 CNIH3Q8TBE1 160 aa3.82□□□□□ -1.8
SSX2IP-208ENST00000490476 PHF10Q8WUB8 498 aaKnown RBP3.82□□□□□ -1.8
SSX2IP-208ENST00000490476 CT55Q8WUE5 264 aa3.82□□□□□ -1.8
SSX2IP-208ENST00000490476 OSTF1Q92882 214 aa3.82□□□□□ -1.8
SSX2IP-208ENST00000490476 NTNG2Q96CW9 530 aa3.82□□□□□ -1.8
SSX2IP-208ENST00000490476 C11orf24Q96F05 449 aaPredicted RBP3.82□□□□□ -1.8
SSX2IP-208ENST00000490476 ZNF607Q96SK3 696 aa3.82□□□□□ -1.8
SSX2IP-208ENST00000490476 CRACR2AQ9BSW2 395 aa3.82□□□□□ -1.8
SSX2IP-208ENST00000490476 KRTAP1-5Q9BYS1 174 aa3.82□□□□□ -1.8
SSX2IP-208ENST00000490476 COMMD4Q9H0A8 199 aa3.82□□□□□ -1.8
SSX2IP-208ENST00000490476 TCEAL2Q9H3H9 227 aaPredicted RBP3.82□□□□□ -1.8
SSX2IP-208ENST00000490476 MEAF6Q9HAF1 191 aa3.82□□□□□ -1.8
SSX2IP-208ENST00000490476 SEC14L3Q9UDX4 400 aa3.82□□□□□ -1.8
SSX2IP-208ENST00000490476 PRODH2Q9UF12 536 aa3.82□□□□□ -1.8
SSX2IP-208ENST00000490476 OR10H1Q9Y4A9 318 aa3.82□□□□□ -1.8
SSX2IP-208ENST00000490476 TRBV7-9A0A0J9YWB2 115 aa3.81□□□□□ -1.8
SSX2IP-208ENST00000490476 LCE6AA0A183 80 aa3.81□□□□□ -1.8
SSX2IP-208ENST00000490476 CCT8L1PA6NM43 557 aa3.81□□□□□ -1.8
SSX2IP-208ENST00000490476 ZNF487B1APH4 448 aa3.81□□□□□ -1.8
SSX2IP-208ENST00000490476 STX7O15400 261 aaKnown RBP3.81□□□□□ -1.8
SSX2IP-208ENST00000490476 TCF21O43680 179 aa3.81□□□□□ -1.8
SSX2IP-208ENST00000490476 DNAJB6O75190 326 aa3.81□□□□□ -1.8
SSX2IP-208ENST00000490476 JCHAINP01591 159 aa3.81□□□□□ -1.8
SSX2IP-208ENST00000490476 IGHV3-9P01782 118 aa3.81□□□□□ -1.8
SSX2IP-208ENST00000490476 PVRP15151 417 aa3.81□□□□□ -1.8
SSX2IP-208ENST00000490476 KCNE1P15382 129 aa3.81□□□□□ -1.8
SSX2IP-208ENST00000490476 SDC1P18827 310 aa3.81□□□□□ -1.8
SSX2IP-208ENST00000490476 XRCC1P18887 633 aaPredicted RBP3.81□□□□□ -1.8
SSX2IP-208ENST00000490476 UQCRC2P22695 453 aa3.81□□□□□ -1.8
SSX2IP-208ENST00000490476 NAMPTP43490 491 aa3.81□□□□□ -1.8
SSX2IP-208ENST00000490476 GBX2P52951 348 aaPredicted RBP3.81□□□□□ -1.8
SSX2IP-208ENST00000490476 NHLRC3Q5JS37 347 aa3.81□□□□□ -1.8
SSX2IP-208ENST00000490476 FAAP20Q6NZ36 180 aa3.81□□□□□ -1.8
SSX2IP-208ENST00000490476 KDELC1Q6UW63 502 aa3.81□□□□□ -1.8
SSX2IP-208ENST00000490476 ALKAL1Q6UXT8 129 aa3.81□□□□□ -1.8
SSX2IP-208ENST00000490476 STXBP4Q6ZWJ1 553 aa3.81□□□□□ -1.8
SSX2IP-208ENST00000490476 TMUB2Q71RG4 321 aa3.81□□□□□ -1.8
SSX2IP-208ENST00000490476 ESR2Q92731 530 aa3.81□□□□□ -1.8
SSX2IP-208ENST00000490476 KLK6Q92876 244 aa3.81□□□□□ -1.8
SSX2IP-208ENST00000490476 SDSLQ96GA7 329 aa3.81□□□□□ -1.8
SSX2IP-208ENST00000490476 PIWIL1Q96J94 861 aaKnown RBP3.81□□□□□ -1.8
SSX2IP-208ENST00000490476 CNDP1Q96KN2 507 aa3.81□□□□□ -1.8
SSX2IP-208ENST00000490476 TCHPQ9BT92 498 aa3.81□□□□□ -1.8
SSX2IP-208ENST00000490476 ZSCAN5AQ9BUG6 496 aa3.81□□□□□ -1.8
SSX2IP-208ENST00000490476 ALG12Q9BV10 488 aa3.81□□□□□ -1.8
SSX2IP-208ENST00000490476 POLR3FQ9H1D9 316 aaPredicted RBP3.81□□□□□ -1.8
SSX2IP-208ENST00000490476 PLEKHF2Q9H8W4 249 aa3.81□□□□□ -1.8
SSX2IP-208ENST00000490476 SUN2Q9UH99 717 aa3.81□□□□□ -1.8
SSX2IP-208ENST00000490476 RNF6Q9Y252 685 aa3.81□□□□□ -1.8
SSX2IP-208ENST00000490476 DNAH9Q9NYC9 4486 aa3.81□□□□□ -1.8
SSX2IP-208ENST00000490476 IGKV3D-15A0A087WSY6 115 aa3.8□□□□□ -1.8
SSX2IP-208ENST00000490476 PPIAL4CA0A0B4J2A2 164 aa3.8□□□□□ -1.8
SSX2IP-208ENST00000490476 ZSCAN5BA6NJL1 495 aa3.8□□□□□ -1.8
SSX2IP-208ENST00000490476 PPIAL4DF5H284 164 aa3.8□□□□□ -1.8
SSX2IP-208ENST00000490476 MAGEB3O15480 346 aa3.8□□□□□ -1.8
SSX2IP-208ENST00000490476 RIPK2O43353 540 aa3.8□□□□□ -1.8
SSX2IP-208ENST00000490476 KLHL41O60662 606 aa3.8□□□□□ -1.8
SSX2IP-208ENST00000490476 BCAS1O75363 584 aaPredicted RBP3.8□□□□□ -1.8
SSX2IP-208ENST00000490476 ALPIP09923 528 aa3.8□□□□□ -1.8
SSX2IP-208ENST00000490476 PPIAL4GP0DN37 164 aa3.8□□□□□ -1.8
SSX2IP-208ENST00000490476 H2AFXP16104 143 aaPredicted RBP3.8□□□□□ -1.8
SSX2IP-208ENST00000490476 EMDP50402 254 aa3.8□□□□□ -1.8
SSX2IP-208ENST00000490476 ACTR1AP61163 376 aa3.8□□□□□ -1.8
SSX2IP-208ENST00000490476 HMGN5P82970 282 aaKnown RBP3.8□□□□□ -1.8
SSX2IP-208ENST00000490476 RGS1Q08116 209 aa3.8□□□□□ -1.8
SSX2IP-208ENST00000490476 SELPLGQ14242 412 aa3.8□□□□□ -1.8
SSX2IP-208ENST00000490476 C17orf58Q2M2W7 97 aa3.8□□□□□ -1.8
SSX2IP-208ENST00000490476 MAJINQ3KP22 176 aa3.8□□□□□ -1.8
SSX2IP-208ENST00000490476 TMEM52BQ4KMG9 183 aa3.8□□□□□ -1.8
SSX2IP-208ENST00000490476 CYBRD1Q53TN4 286 aa3.8□□□□□ -1.8
SSX2IP-208ENST00000490476 C6orf52Q5T4I8 152 aa3.8□□□□□ -1.8
SSX2IP-208ENST00000490476 KCNIP4Q6PIL6 250 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms