RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 SEC61A2Q9H9S3 476 aa11.24□□□□□ -0.61
HDAC1-209ENST00000484305 C20orf141Q9NUB4 165 aa11.24□□□□□ -0.61
HDAC1-209ENST00000484305 CRNNQ9UBG3 495 aaPredicted RBP11.24□□□□□ -0.61
HDAC1-209ENST00000484305 GDF2Q9UK05 429 aaPredicted RBP11.24□□□□□ -0.61
HDAC1-209ENST00000484305 A4GNTQ9UNA3 340 aa11.24□□□□□ -0.61
HDAC1-209ENST00000484305 SNX13Q9Y5W8 968 aa11.24□□□□□ -0.61
HDAC1-209ENST00000484305 ARFGEF3Q5TH69 2177 aa11.23□□□□□ -0.61
HDAC1-209ENST00000484305 BLOC1S5-TXNDC5H3BN57 136 aa11.23□□□□□ -0.61
HDAC1-209ENST00000484305 SMAD7O15105 426 aaKnown RBP11.23□□□□□ -0.61
HDAC1-209ENST00000484305 GSTA4O15217 222 aa11.23□□□□□ -0.61
HDAC1-209ENST00000484305 RNF13O43567 381 aa11.23□□□□□ -0.61
HDAC1-209ENST00000484305 IGHV4-39P01824 125 aa11.23□□□□□ -0.61
HDAC1-209ENST00000484305 HIST1H2ABP04908 130 aa11.23□□□□□ -0.61
HDAC1-209ENST00000484305 CECR9P0C854 216 aa11.23□□□□□ -0.61
HDAC1-209ENST00000484305 FUT1P19526 365 aa11.23□□□□□ -0.61
HDAC1-209ENST00000484305 FUT4P22083 530 aa11.23□□□□□ -0.61
HDAC1-209ENST00000484305 RBM34P42696 430 aaKnown RBP11.23□□□□□ -0.61
HDAC1-209ENST00000484305 YAP1P46937 504 aaKnown RBP11.23□□□□□ -0.61
HDAC1-209ENST00000484305 PSME3P61289 254 aa11.23□□□□□ -0.61
HDAC1-209ENST00000484305 MELKQ14680 651 aa11.23□□□□□ -0.61
HDAC1-209ENST00000484305 C11orf71Q6IPW1 123 aa11.23□□□□□ -0.61
HDAC1-209ENST00000484305 ZNF544Q6NX49 715 aa11.23□□□□□ -0.61
HDAC1-209ENST00000484305 Q71RC1 249 aaPredicted RBP11.23□□□□□ -0.61
HDAC1-209ENST00000484305 HIST3H2AQ7L7L0 130 aa11.23□□□□□ -0.61
HDAC1-209ENST00000484305 NANOGNBQ7Z5D8 188 aa11.23□□□□□ -0.61
HDAC1-209ENST00000484305 BIVMQ86UB2 503 aa11.23□□□□□ -0.61
HDAC1-209ENST00000484305 MYPOPQ86VE0 399 aaPredicted RBP11.23□□□□□ -0.61
HDAC1-209ENST00000484305 FBXL14Q8N1E6 418 aa11.23□□□□□ -0.61
HDAC1-209ENST00000484305 MUC15Q8N387 334 aa11.23□□□□□ -0.61
HDAC1-209ENST00000484305 OR6X1Q8NH79 312 aa11.23□□□□□ -0.61
HDAC1-209ENST00000484305 TMEM239Q8WW34 195 aa11.23□□□□□ -0.61
HDAC1-209ENST00000484305 LZICQ8WZA0 190 aa11.23□□□□□ -0.61
HDAC1-209ENST00000484305 HIST1H2ACQ93077 130 aa11.23□□□□□ -0.61
HDAC1-209ENST00000484305 CMTM5Q96DZ9 223 aa11.23□□□□□ -0.61
HDAC1-209ENST00000484305 COX4I2Q96KJ9 171 aa11.23□□□□□ -0.61
HDAC1-209ENST00000484305 ULBP2Q9BZM5 246 aa11.23□□□□□ -0.61
HDAC1-209ENST00000484305 NSRP1Q9H0G5 558 aaKnown RBP11.23□□□□□ -0.61
HDAC1-209ENST00000484305 B3GAT2Q9NPZ5 323 aa11.23□□□□□ -0.61
HDAC1-209ENST00000484305 CBLN4Q9NTU7 201 aa11.23□□□□□ -0.61
HDAC1-209ENST00000484305 NF1P21359 2839 aa11.22□□□□□ -0.61
HDAC1-209ENST00000484305 J3KTA2 159 aa11.22□□□□□ -0.61
HDAC1-209ENST00000484305 PIP5K1CO60331 668 aa11.22□□□□□ -0.61
HDAC1-209ENST00000484305 OR7A10O76100 309 aa11.22□□□□□ -0.61
HDAC1-209ENST00000484305 ZNF682O95780 498 aa11.22□□□□□ -0.61
HDAC1-209ENST00000484305 IGKV3-15P01624 115 aa11.22□□□□□ -0.61
HDAC1-209ENST00000484305 IGLV1-44P01699 117 aa11.22□□□□□ -0.61
HDAC1-209ENST00000484305 CELA3BP08861 270 aa11.22□□□□□ -0.61
HDAC1-209ENST00000484305 THRBP10828 461 aa11.22□□□□□ -0.61
HDAC1-209ENST00000484305 CBR1P16152 277 aa11.22□□□□□ -0.61
HDAC1-209ENST00000484305 NCK1P16333 377 aa11.22□□□□□ -0.61
HDAC1-209ENST00000484305 PAX7P23759 505 aa11.22□□□□□ -0.61
HDAC1-209ENST00000484305 PRDX6P30041 224 aa11.22□□□□□ -0.61
HDAC1-209ENST00000484305 ACVR1BP36896 505 aa11.22□□□□□ -0.61
HDAC1-209ENST00000484305 CSNK1A1P48729 337 aa11.22□□□□□ -0.61
HDAC1-209ENST00000484305 GNGT1P63211 74 aa11.22□□□□□ -0.61
HDAC1-209ENST00000484305 LSM11P83369 360 aaKnown RBP eCLIP11.22□□□□□ -0.61
HDAC1-209ENST00000484305 NAAAQ02083 359 aa11.22□□□□□ -0.61
HDAC1-209ENST00000484305 RPL18Q07020 188 aaKnown RBP11.22□□□□□ -0.61
HDAC1-209ENST00000484305 ST3GAL3Q11203 375 aa11.22□□□□□ -0.61
HDAC1-209ENST00000484305 CLEC12BQ2HXU8 276 aa11.22□□□□□ -0.61
HDAC1-209ENST00000484305 CBLL1Q75N03 491 aa11.22□□□□□ -0.61
HDAC1-209ENST00000484305 MDP1Q86V88 176 aa11.22□□□□□ -0.61
HDAC1-209ENST00000484305 FAM169BQ8N8A8 192 aa11.22□□□□□ -0.61
HDAC1-209ENST00000484305 TMEM54Q969K7 222 aa11.22□□□□□ -0.61
HDAC1-209ENST00000484305 SGTBQ96EQ0 304 aa11.22□□□□□ -0.61
HDAC1-209ENST00000484305 PRRC1Q96M27 445 aa11.22□□□□□ -0.61
HDAC1-209ENST00000484305 ADAD1Q96M93 576 aaKnown RBP11.22□□□□□ -0.61
HDAC1-209ENST00000484305 HS6ST2Q96MM7 605 aa11.22□□□□□ -0.61
HDAC1-209ENST00000484305 KCTD14Q9BQ13 255 aaPredicted RBP11.22□□□□□ -0.61
HDAC1-209ENST00000484305 KATNB1Q9BVA0 655 aa11.22□□□□□ -0.61
HDAC1-209ENST00000484305 CACNG6Q9BXT2 260 aa11.22□□□□□ -0.61
HDAC1-209ENST00000484305 RHCGQ9UBD6 479 aa11.22□□□□□ -0.61
HDAC1-209ENST00000484305 ABCD2Q9UBJ2 740 aa11.22□□□□□ -0.61
HDAC1-209ENST00000484305 POFUT2Q9Y2G5 429 aa11.22□□□□□ -0.61
HDAC1-209ENST00000484305 FFAR1O14842 300 aa11.21□□□□□ -0.61
HDAC1-209ENST00000484305 LY6G6DO95868 133 aa11.21□□□□□ -0.61
HDAC1-209ENST00000484305 SERPINA1P01009 418 aa11.21□□□□□ -0.61
HDAC1-209ENST00000484305 IGF2P01344 180 aa11.21□□□□□ -0.61
HDAC1-209ENST00000484305 CRYAAP02489 173 aa11.21□□□□□ -0.61
HDAC1-209ENST00000484305 F13BP05160 661 aa11.21□□□□□ -0.61
HDAC1-209ENST00000484305 B4GALT1P15291 398 aa11.21□□□□□ -0.61
HDAC1-209ENST00000484305 CALCRP30988 508 aa11.21□□□□□ -0.61
HDAC1-209ENST00000484305 APOBEC3AP31941 199 aaPredicted RBP11.21□□□□□ -0.61
HDAC1-209ENST00000484305 AQP2P41181 271 aa11.21□□□□□ -0.61
HDAC1-209ENST00000484305 CAPZA2P47755 286 aa11.21□□□□□ -0.61
HDAC1-209ENST00000484305 IDH3GP51553 393 aaPredicted RBP11.21□□□□□ -0.61
HDAC1-209ENST00000484305 TNK1Q13470 666 aa11.21□□□□□ -0.61
HDAC1-209ENST00000484305 C3orf36Q3SXR2 165 aa11.21□□□□□ -0.61
HDAC1-209ENST00000484305 CLEC9AQ6UXN8 241 aa11.21□□□□□ -0.61
HDAC1-209ENST00000484305 ZNF813Q6ZN06 617 aa11.21□□□□□ -0.61
HDAC1-209ENST00000484305 ZNF627Q7L945 461 aa11.21□□□□□ -0.61
HDAC1-209ENST00000484305 PIGWQ7Z7B1 504 aa11.21□□□□□ -0.61
HDAC1-209ENST00000484305 CCDC36Q8IYA8 594 aa11.21□□□□□ -0.61
HDAC1-209ENST00000484305 LIPHQ8WWY8 451 aa11.21□□□□□ -0.61
HDAC1-209ENST00000484305 HTRA1Q92743 480 aa11.21□□□□□ -0.61
HDAC1-209ENST00000484305 ZNF566Q969W8 418 aa11.21□□□□□ -0.61
HDAC1-209ENST00000484305 SLC25A44Q96H78 314 aaPredicted RBP11.21□□□□□ -0.61
HDAC1-209ENST00000484305 HSH2DQ96JZ2 352 aa11.21□□□□□ -0.61
HDAC1-209ENST00000484305 KCNS3Q9BQ31 491 aa11.21□□□□□ -0.61
HDAC1-209ENST00000484305 NOX3Q9HBY0 568 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 111.8 ms