RNA–Protein interactions for RNA: ENST00000400183.6

USP25-204, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 1 (best) BASIC

Gene USP25, Length 5,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-204ENST00000400183 FUNDC1Q8IVP5 155 aa17.08■□□□□ 0.33
USP25-204ENST00000400183 ZNF511Q8NB15 262 aa17.08■□□□□ 0.33
USP25-204ENST00000400183 SLCO5A1Q9H2Y9 848 aa17.08■□□□□ 0.33
USP25-204ENST00000400183 LYRM4Q9HD34 91 aa17.08■□□□□ 0.33
USP25-204ENST00000400183 SNX11Q9Y5W9 270 aa17.08■□□□□ 0.33
USP25-204ENST00000400183 RAB4AP20338 218 aa17.08■□□□□ 0.32
USP25-204ENST00000400183 SLC35D3Q5M8T2 416 aa17.08■□□□□ 0.32
USP25-204ENST00000400183 FOXB2Q5VYV0 432 aa17.08■□□□□ 0.32
USP25-204ENST00000400183 UBQLN3Q9H347 655 aa17.08■□□□□ 0.32
USP25-204ENST00000400183 OCEL1Q9H607 264 aa17.08■□□□□ 0.32
USP25-204ENST00000400183 SIAEQ9HAT2 523 aa17.08■□□□□ 0.32
USP25-204ENST00000400183 QPCTLQ9NXS2 382 aa17.08■□□□□ 0.32
USP25-204ENST00000400183 BOLA1Q9Y3E2 137 aa17.08■□□□□ 0.32
USP25-204ENST00000400183 A0A1B0GX78 115 aa17.08■□□□□ 0.32
USP25-204ENST00000400183 PRICKLE3O43900 615 aaPredicted RBP17.08■□□□□ 0.32
USP25-204ENST00000400183 PPP3CBP16298 524 aa17.08■□□□□ 0.32
USP25-204ENST00000400183 ZNF750Q32MQ0 723 aa17.08■□□□□ 0.32
USP25-204ENST00000400183 METRNLQ641Q3 311 aa17.08■□□□□ 0.32
USP25-204ENST00000400183 ZNF808Q8N4W9 903 aaPredicted RBP17.08■□□□□ 0.32
USP25-204ENST00000400183 OR52I1Q8NGK6 324 aa17.08■□□□□ 0.32
USP25-204ENST00000400183 WFDC5Q8TCV5 224 aa17.08■□□□□ 0.32
USP25-204ENST00000400183 UCN3Q969E3 161 aa17.08■□□□□ 0.32
USP25-204ENST00000400183 ANKRD9Q96BM1 317 aaPredicted RBP17.08■□□□□ 0.32
USP25-204ENST00000400183 STACQ99469 402 aa17.08■□□□□ 0.32
USP25-204ENST00000400183 SLC19A3Q9BZV2 496 aa17.08■□□□□ 0.32
USP25-204ENST00000400183 FAM155AB1AL88 458 aaPredicted RBP17.07■□□□□ 0.32
USP25-204ENST00000400183 CSO75390 466 aaKnown RBP17.07■□□□□ 0.32
USP25-204ENST00000400183 MT-ATP6P00846 226 aa17.07■□□□□ 0.32
USP25-204ENST00000400183 TEAD1P28347 426 aa17.07■□□□□ 0.32
USP25-204ENST00000400183 ZNF93P35789 620 aaPredicted RBP17.07■□□□□ 0.32
USP25-204ENST00000400183 TRIM23P36406 574 aa17.07■□□□□ 0.32
USP25-204ENST00000400183 HEPHL1Q6MZM0 1159 aa17.07■□□□□ 0.32
USP25-204ENST00000400183 NKAIN3Q8N8D7 197 aa17.07■□□□□ 0.32
USP25-204ENST00000400183 OR5M11Q96RB7 305 aa17.07■□□□□ 0.32
USP25-204ENST00000400183 FAM212BQ9NTI7 297 aaPredicted RBP17.07■□□□□ 0.32
USP25-204ENST00000400183 FADS1O60427 444 aa17.07■□□□□ 0.32
USP25-204ENST00000400183 ALOX12BO75342 701 aa17.07■□□□□ 0.32
USP25-204ENST00000400183 KLHDC8BQ8IXV7 354 aa17.07■□□□□ 0.32
USP25-204ENST00000400183 KLRC4-KLRK1H3BQV0 150 aa17.07■□□□□ 0.32
USP25-204ENST00000400183 PLPP1O14494 284 aa17.07■□□□□ 0.32
USP25-204ENST00000400183 HOXC11O43248 304 aaPredicted RBP17.07■□□□□ 0.32
USP25-204ENST00000400183 ZNF836Q6ZNA1 936 aa17.07■□□□□ 0.32
USP25-204ENST00000400183 CPNE4Q96A23 557 aaPredicted RBP17.07■□□□□ 0.32
USP25-204ENST00000400183 P2RY12Q9H244 342 aa17.07■□□□□ 0.32
USP25-204ENST00000400183 COPS3Q9UNS2 423 aa17.07■□□□□ 0.32
USP25-204ENST00000400183 PRAMEF25A6NGN4 478 aa17.07■□□□□ 0.32
USP25-204ENST00000400183 LIM2P55344 173 aa17.07■□□□□ 0.32
USP25-204ENST00000400183 LRRC26Q2I0M4 334 aa17.07■□□□□ 0.32
USP25-204ENST00000400183 SYT9Q86SS6 491 aa17.07■□□□□ 0.32
USP25-204ENST00000400183 OR6M1Q8NGM8 313 aa17.07■□□□□ 0.32
USP25-204ENST00000400183 MRPL38Q96DV4 380 aaKnown RBP17.07■□□□□ 0.32
USP25-204ENST00000400183 PDXPQ96GD0 296 aa17.07■□□□□ 0.32
USP25-204ENST00000400183 NPAP1Q9NZP6 1156 aa17.07■□□□□ 0.32
USP25-204ENST00000400183 FBXL2Q9UKC9 423 aa17.07■□□□□ 0.32
USP25-204ENST00000400183 C17orf112F2Z3M2 114 aa17.06■□□□□ 0.32
USP25-204ENST00000400183 HSPB6O14558 160 aa17.06■□□□□ 0.32
USP25-204ENST00000400183 APEX1P27695 318 aaKnown RBP17.06■□□□□ 0.32
USP25-204ENST00000400183 HBG1P69891 147 aa17.06■□□□□ 0.32
USP25-204ENST00000400183 HBG2P69892 147 aa17.06■□□□□ 0.32
USP25-204ENST00000400183 C1orf140Q5VVS0 124 aa17.06■□□□□ 0.32
USP25-204ENST00000400183 CST9Q5W186 159 aa17.06■□□□□ 0.32
USP25-204ENST00000400183 CST9LP1Q5W188 147 aa17.06■□□□□ 0.32
USP25-204ENST00000400183 SVBPQ8N300 66 aa17.06■□□□□ 0.32
USP25-204ENST00000400183 ATP13A2Q9NQ11 1180 aa17.06■□□□□ 0.32
USP25-204ENST00000400183 TRDV1A0A1B0GX56 115 aa17.06■□□□□ 0.32
USP25-204ENST00000400183 PAPLNO95428 1278 aa17.06■□□□□ 0.32
USP25-204ENST00000400183 ZNF728P0DKX0 622 aa17.06■□□□□ 0.32
USP25-204ENST00000400183 PRICKLE2Q7Z3G6 844 aa17.06■□□□□ 0.32
USP25-204ENST00000400183 MARCH3Q86UD3 253 aa17.06■□□□□ 0.32
USP25-204ENST00000400183 ELF4Q99607 663 aaPredicted RBP17.06■□□□□ 0.32
USP25-204ENST00000400183 TWSG1Q9GZX9 223 aa17.06■□□□□ 0.32
USP25-204ENST00000400183 HRASLSQ9HDD0 168 aa17.06■□□□□ 0.32
USP25-204ENST00000400183 TUBG2Q9NRH3 451 aa17.06■□□□□ 0.32
USP25-204ENST00000400183 CRYBG1Q9Y4K1 1723 aa17.06■□□□□ 0.32
USP25-204ENST00000400183 EIF4E2O60573 245 aaKnown RBP17.06■□□□□ 0.32
USP25-204ENST00000400183 ICMTO60725 284 aa17.06■□□□□ 0.32
USP25-204ENST00000400183 GLCEO94923 617 aa17.06■□□□□ 0.32
USP25-204ENST00000400183 NAGAP17050 411 aa17.06■□□□□ 0.32
USP25-204ENST00000400183 THBS3P49746 956 aa17.06■□□□□ 0.32
USP25-204ENST00000400183 SSX2Q16385 188 aa17.06■□□□□ 0.32
USP25-204ENST00000400183 EXT1Q16394 746 aa17.06■□□□□ 0.32
USP25-204ENST00000400183 RNLSQ5VYX0 342 aa17.06■□□□□ 0.32
USP25-204ENST00000400183 AFMIDQ63HM1 303 aa17.06■□□□□ 0.32
USP25-204ENST00000400183 STEAP1BQ6NZ63 245 aa17.06■□□□□ 0.32
USP25-204ENST00000400183 KCNIP4Q6PIL6 250 aa17.06■□□□□ 0.32
USP25-204ENST00000400183 FKRPQ9H9S5 495 aa17.06■□□□□ 0.32
USP25-204ENST00000400183 GALNT9Q9HCQ5 603 aa17.06■□□□□ 0.32
USP25-204ENST00000400183 HIF1ANQ9NWT6 349 aa17.06■□□□□ 0.32
USP25-204ENST00000400183 ZNF225Q9UK10 706 aa17.06■□□□□ 0.32
USP25-204ENST00000400183 LRIT2A6NDA9 550 aa17.06■□□□□ 0.32
USP25-204ENST00000400183 ZNF749O43361 778 aa17.06■□□□□ 0.32
USP25-204ENST00000400183 NXPH2O95156 264 aa17.06■□□□□ 0.32
USP25-204ENST00000400183 BCKDHBP21953 392 aa17.06■□□□□ 0.32
USP25-204ENST00000400183 PAN3Q58A45 887 aaKnown RBP17.06■□□□□ 0.32
USP25-204ENST00000400183 GRINAQ7Z429 371 aa17.06■□□□□ 0.32
USP25-204ENST00000400183 SLC37A2Q8TED4 501 aa17.06■□□□□ 0.32
USP25-204ENST00000400183 MZB1Q8WU39 189 aa17.06■□□□□ 0.32
USP25-204ENST00000400183 SLC25A43Q8WUT9 341 aaPredicted RBP17.06■□□□□ 0.32
USP25-204ENST00000400183 DUSP22Q9NRW4 184 aa17.06■□□□□ 0.32
USP25-204ENST00000400183 RFXAPO00287 272 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms