RNA–Protein interactions for RNA: ENST00000273062.6

CTDSP1-201, Transcript of CTD small phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSP1, Length 2,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-201ENST00000273062 POFUT1Q9H488 388 aa14.37□□□□□ -0.11
CTDSP1-201ENST00000273062 H2AFY2Q9P0M6 372 aaPredicted RBP14.37□□□□□ -0.11
CTDSP1-201ENST00000273062 MT-ND5P03915 603 aa14.37□□□□□ -0.11
CTDSP1-201ENST00000273062 FAM157CP0CG43 387 aa14.37□□□□□ -0.11
CTDSP1-201ENST00000273062 CD80P33681 288 aa14.37□□□□□ -0.11
CTDSP1-201ENST00000273062 MNDAP41218 407 aa14.37□□□□□ -0.11
CTDSP1-201ENST00000273062 RPP30P78346 268 aaKnown RBP14.37□□□□□ -0.11
CTDSP1-201ENST00000273062 ZNF763Q0D2J5 394 aa14.37□□□□□ -0.11
CTDSP1-201ENST00000273062 HYAL4Q2M3T9 481 aa14.37□□□□□ -0.11
CTDSP1-201ENST00000273062 PGGHGQ32M88 737 aa14.37□□□□□ -0.11
CTDSP1-201ENST00000273062 AWAT1Q58HT5 328 aa14.37□□□□□ -0.11
CTDSP1-201ENST00000273062 NKAPLQ5M9Q1 402 aa14.37□□□□□ -0.11
CTDSP1-201ENST00000273062 COMMD6Q7Z4G1 85 aa14.37□□□□□ -0.11
CTDSP1-201ENST00000273062 ZNF433Q8N7K0 673 aaPredicted RBP14.37□□□□□ -0.11
CTDSP1-201ENST00000273062 NDC1Q9BTX1 674 aa14.37□□□□□ -0.11
CTDSP1-201ENST00000273062 RIOK2Q9BVS4 552 aaKnown RBP14.37□□□□□ -0.11
CTDSP1-201ENST00000273062 WNT5BQ9H1J7 359 aa14.37□□□□□ -0.11
CTDSP1-201ENST00000273062 APMAPQ9HDC9 416 aa14.37□□□□□ -0.11
CTDSP1-201ENST00000273062 RNASEK-C17orf49H0YIS7 233 aa14.36□□□□□ -0.11
CTDSP1-201ENST00000273062 HMGN4O00479 90 aa14.36□□□□□ -0.11
CTDSP1-201ENST00000273062 EREGO14944 169 aa14.36□□□□□ -0.11
CTDSP1-201ENST00000273062 CD8AP01732 235 aa14.36□□□□□ -0.11
CTDSP1-201ENST00000273062 ATP1B2P14415 290 aaPredicted RBP14.36□□□□□ -0.11
CTDSP1-201ENST00000273062 GSTM3P21266 225 aa14.36□□□□□ -0.11
CTDSP1-201ENST00000273062 S100A2P29034 98 aa14.36□□□□□ -0.11
CTDSP1-201ENST00000273062 CDX1P47902 265 aaPredicted RBP14.36□□□□□ -0.11
CTDSP1-201ENST00000273062 ID4P47928 161 aa14.36□□□□□ -0.11
CTDSP1-201ENST00000273062 SLC16A1P53985 500 aa14.36□□□□□ -0.11
CTDSP1-201ENST00000273062 ZNF234Q14588 700 aa14.36□□□□□ -0.11
CTDSP1-201ENST00000273062 MEF2DQ14814 521 aa14.36□□□□□ -0.11
CTDSP1-201ENST00000273062 ALG11Q2TAA5 492 aa14.36□□□□□ -0.11
CTDSP1-201ENST00000273062 TMEM240Q5SV17 173 aa14.36□□□□□ -0.11
CTDSP1-201ENST00000273062 DMKNQ6E0U4 476 aaPredicted RBP14.36□□□□□ -0.11
CTDSP1-201ENST00000273062 FAM83HQ6ZRV2 1179 aaPredicted RBP14.36□□□□□ -0.11
CTDSP1-201ENST00000273062 TMED4Q7Z7H5 227 aa14.36□□□□□ -0.11
CTDSP1-201ENST00000273062 SFTPA1Q8IWL2 248 aa14.36□□□□□ -0.11
CTDSP1-201ENST00000273062 PAQR4Q8N4S7 273 aaPredicted RBP14.36□□□□□ -0.11
CTDSP1-201ENST00000273062 C12orf76Q8N812 135 aaPredicted RBP14.36□□□□□ -0.11
CTDSP1-201ENST00000273062 KISS1RQ969F8 398 aaPredicted RBP14.36□□□□□ -0.11
CTDSP1-201ENST00000273062 EXO5Q9H790 373 aa14.36□□□□□ -0.11
CTDSP1-201ENST00000273062 SYNPO2LQ9H987 977 aa14.36□□□□□ -0.11
CTDSP1-201ENST00000273062 FN3KRPQ9HA64 309 aa14.36□□□□□ -0.11
CTDSP1-201ENST00000273062 GAR1Q9NY12 217 aaKnown RBP14.36□□□□□ -0.11
CTDSP1-201ENST00000273062 WSB2Q9NYS7 404 aaPredicted RBP14.36□□□□□ -0.11
CTDSP1-201ENST00000273062 C5AR2Q9P296 337 aa14.36□□□□□ -0.11
CTDSP1-201ENST00000273062 NTNG1Q9Y2I2 539 aa14.36□□□□□ -0.11
CTDSP1-201ENST00000273062 TRAV1-2A0A0B4J238 106 aa14.36□□□□□ -0.11
CTDSP1-201ENST00000273062 MARCH11A6NNE9 402 aa14.36□□□□□ -0.11
CTDSP1-201ENST00000273062 ZNF749O43361 778 aa14.36□□□□□ -0.11
CTDSP1-201ENST00000273062 LIPCP11150 499 aa14.36□□□□□ -0.11
CTDSP1-201ENST00000273062 TIMP2P16035 220 aa14.36□□□□□ -0.11
CTDSP1-201ENST00000273062 NT5EP21589 574 aa14.36□□□□□ -0.11
CTDSP1-201ENST00000273062 VIPR2P41587 438 aa14.36□□□□□ -0.11
CTDSP1-201ENST00000273062 GUCA2AQ02747 115 aa14.36□□□□□ -0.11
CTDSP1-201ENST00000273062 LIPJQ5W064 366 aa14.36□□□□□ -0.11
CTDSP1-201ENST00000273062 NSUN5P2Q63ZY6 315 aa14.36□□□□□ -0.11
CTDSP1-201ENST00000273062 LMNTD1Q8N9Z9 388 aa14.36□□□□□ -0.11
CTDSP1-201ENST00000273062 OR4E2Q8NGC2 313 aa14.36□□□□□ -0.11
CTDSP1-201ENST00000273062 TAAR9Q96RI9 348 aa14.36□□□□□ -0.11
CTDSP1-201ENST00000273062 ZNF559Q9BR84 538 aa14.36□□□□□ -0.11
CTDSP1-201ENST00000273062 SLC12A9Q9BXP2 914 aa14.36□□□□□ -0.11
CTDSP1-201ENST00000273062 MMACHCQ9Y4U1 282 aa14.36□□□□□ -0.11
CTDSP1-201ENST00000273062 SPTBN5Q9NRC6 3674 aaKnown RBP14.35□□□□□ -0.11
CTDSP1-201ENST00000273062 C7orf77A4D0Y5 90 aa14.35□□□□□ -0.11
CTDSP1-201ENST00000273062 BLOC1S5-TXNDC5H3BN57 136 aa14.35□□□□□ -0.11
CTDSP1-201ENST00000273062 BCAT2O15382 392 aaPredicted RBP14.35□□□□□ -0.11
CTDSP1-201ENST00000273062 CLUP10909 449 aa14.35□□□□□ -0.11
CTDSP1-201ENST00000273062 FUT1P19526 365 aa14.35□□□□□ -0.11
CTDSP1-201ENST00000273062 GLP1RP43220 463 aa14.35□□□□□ -0.11
CTDSP1-201ENST00000273062 NDUFA6P56556 154 aa14.35□□□□□ -0.11
CTDSP1-201ENST00000273062 TAS2R20P59543 309 aa14.35□□□□□ -0.11
CTDSP1-201ENST00000273062 TSPAN31Q12999 210 aa14.35□□□□□ -0.11
CTDSP1-201ENST00000273062 PPA1Q15181 289 aa14.35□□□□□ -0.11
CTDSP1-201ENST00000273062 ACTBL2Q562R1 376 aa14.35□□□□□ -0.11
CTDSP1-201ENST00000273062 LIPNQ5VXI9 398 aa14.35□□□□□ -0.11
CTDSP1-201ENST00000273062 LIN54Q6MZP7 749 aa14.35□□□□□ -0.11
CTDSP1-201ENST00000273062 NIPAL3Q6P499 406 aa14.35□□□□□ -0.11
CTDSP1-201ENST00000273062 ZNF574Q6ZN55 896 aaPredicted RBP14.35□□□□□ -0.11
CTDSP1-201ENST00000273062 ADCK2Q7Z695 626 aa14.35□□□□□ -0.11
CTDSP1-201ENST00000273062 OR8S1Q8NH09 359 aa14.35□□□□□ -0.11
CTDSP1-201ENST00000273062 PIK3IP1Q96FE7 263 aa14.35□□□□□ -0.11
CTDSP1-201ENST00000273062 MED8Q96G25 268 aa14.35□□□□□ -0.11
CTDSP1-201ENST00000273062 HSPA12BQ96MM6 686 aa14.35□□□□□ -0.11
CTDSP1-201ENST00000273062 PDCD1LG2Q9BQ51 273 aa14.35□□□□□ -0.11
CTDSP1-201ENST00000273062 MTCL1Q9Y4B5 1905 aaKnown RBP14.35□□□□□ -0.11
CTDSP1-201ENST00000273062 A0A0B4J2A0 478 aa14.35□□□□□ -0.11
CTDSP1-201ENST00000273062 A0A1W2PPE2 198 aa14.35□□□□□ -0.11
CTDSP1-201ENST00000273062 FAM157AC9JC47 383 aa14.35□□□□□ -0.11
CTDSP1-201ENST00000273062 GSK3AP49840 483 aa14.35□□□□□ -0.11
CTDSP1-201ENST00000273062 PKIAP61925 76 aa14.35□□□□□ -0.11
CTDSP1-201ENST00000273062 RPS11P62280 158 aaKnown RBP eCLIP14.35□□□□□ -0.11
CTDSP1-201ENST00000273062 ZNF85Q03923 595 aa14.35□□□□□ -0.11
CTDSP1-201ENST00000273062 KIAA0141Q14154 515 aaPredicted RBP14.35□□□□□ -0.11
CTDSP1-201ENST00000273062 KCNAB1Q14722 419 aa14.35□□□□□ -0.11
CTDSP1-201ENST00000273062 FNDC3BQ53EP0 1204 aaKnown RBP14.35□□□□□ -0.11
CTDSP1-201ENST00000273062 ZC3HAV1Q7Z2W4 902 aaKnown RBP14.35□□□□□ -0.11
CTDSP1-201ENST00000273062 OR6N1Q8NGY5 312 aa14.35□□□□□ -0.11
CTDSP1-201ENST00000273062 ASB11Q8WXH4 323 aa14.35□□□□□ -0.11
CTDSP1-201ENST00000273062 A4GALTQ9NPC4 353 aa14.35□□□□□ -0.11
CTDSP1-201ENST00000273062 TAAR2Q9P1P5 351 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms