RNA–Protein interactions for RNA: ENSMUST00000113440.1

Ccdc88b-201, Transcript of Coiled-coil domain-containing protein 88B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc88b, Length 4,959 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88b-201ENSMUST00000113440 VipP32648 170 aa14.41□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Ppp2cbP62715 309 aa14.41□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Ppp2caP63330 309 aa14.41□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Znf728Q6P5C7 752 aa14.41□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Cdh24Q6PFX6 781 aa14.41□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Sult2a8Q8BGL3 282 aa14.41□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 PcgF3Q8BTQ0 241 aa14.41□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Slc5a8Q8BYF6 611 aa14.41□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Tmem200aQ8C817 491 aa14.41□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Vmn1r212Q8R268 357 aa14.41□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Vmn1r28Q8R2C9 302 aa14.41□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Phospho1Q8R2H9 267 aa14.41□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Olfr340Q8VGL0 312 aa14.41□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Ppil1Q9D0W5 166 aa14.41□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Pfn3Q9DAD6 137 aa14.41□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Tmem37Q9JJV3 211 aa14.41□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Oaz3Q9R109 243 aa14.41□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Alpk2Q91ZB0 2144 aa14.41□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Slc25a34A2ADF7 318 aa14.41□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Hbb-bh2B2RVB7 147 aa14.41□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Rap2bP61226 183 aa14.41□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Ddhd2Q80Y98 699 aa14.41□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Mettl2Q8BMK1 389 aa14.41□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Nhlrc2Q8BZW8 725 aa14.41□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Ankmy1Q8C0W1 906 aa14.41□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Rp2Q9EPK2 347 aa14.41□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 PvrigA0A1B0GS01 234 aa14.41□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Tmem185aA2AF53 350 aa14.41□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 4930451I11RikE9Q9R3 111 aa14.41□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Glp1rO35659 463 aa14.41□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Fosl2P47930 326 aa14.41□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 D17Wsu92eQ3TT38 291 aa14.41□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Gm648Q3UJ22 213 aa14.41□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Gm11492Q5ND19 536 aa14.41□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Olfr146Q60884 306 aa14.41□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Il17fQ7TNI7 161 aa14.41□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Slc43a2Q8CGA3 568 aa14.41□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Olfr583Q8VG25 319 aa14.41□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Olfr283Q8VGU2 309 aa14.41□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 RTRAFQ9CQE8 244 aa14.41□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Arpc5lQ9D898 153 aa14.41□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Olfr716Q9EPG6 314 aa14.41□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Olfr938Q9EQ93 315 aa14.41□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Slc30a7Q9JKN1 378 aa14.41□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Gm14399A2ARW8 610 aa14.4□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Adh1P00329 375 aa14.4□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Rab11bP46638 218 aa14.4□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Cmpk2Q3U5Q7 447 aa14.4□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Slc27a5Q4LDG0 689 aa14.4□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Ffar4Q7TMA4 361 aa14.4□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Ddit4lQ8VHZ5 193 aa14.4□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Sfxn2Q925N2 322 aa14.4□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Eny2Q9JIX0 101 aaKnown RBP14.4□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Tbl2Q9R099 442 aaKnown RBP14.4□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Rhox1B1APN4 224 aa14.4□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Zfp735B1ARH2 734 aa14.4□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Gm3685J3QPP2 205 aa14.4□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Prss39O70169 367 aa14.4□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 PipP02816 146 aa14.4□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Hbb-bh1P04444 147 aa14.4□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Klk1b9P15949 261 aa14.4□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Entpd6Q3U0P5 455 aa14.4□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Gramd2bQ6PEM6 445 aa14.4□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Lrit2Q6PFC5 549 aa14.4□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Emc1Q8C7X2 997 aaKnown RBP14.4□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Lmcd1Q8VEE1 365 aa14.4□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Olfr160Q8VGE3 309 aa14.4□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Arrb2Q91YI4 410 aa14.4□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Acy1Q99JW2 408 aa14.4□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Ifitm3Q9CQW9 137 aa14.4□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Glb1l3A2RSQ1 649 aa14.4□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Dusp23Q6NT99 150 aa14.4□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Vmn1r210Q8R274 306 aa14.4□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Nkd2Q8VE28 461 aa14.4□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Olfr351Q8VGK1 310 aa14.4□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 FtmtQ9D5H4 237 aa14.4□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Mrpl39Q9JKF7 336 aa14.4□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Prr22F6TNE3 422 aa14.4□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Vmn2r117K7N6V1 857 aa14.4□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 MbpP04370 250 aa14.4□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 HckP08103 524 aa14.4□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Nid1P10493 1245 aa14.4□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Msx1P13297 303 aa14.4□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Cox4i1P19783 169 aaKnown RBP14.4□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 ChrneP20782 493 aa14.4□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Pcsk4P29121 655 aa14.4□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Q5SPV6 233 aa14.4□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Dag1Q62165 893 aa14.4□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Cep290Q6A078 2472 aa14.39□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Rhox2bA2A447 191 aa14.39□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Rhox2cA2AWL9 191 aa14.39□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 NppaP05125 152 aa14.39□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 SnrpgP62309 76 aaKnown RBP14.39□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Map3k8Q07174 467 aa14.39□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 SelenoiQ80TA1 398 aa14.39□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Otop1Q80VM9 600 aa14.39□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Wfikkn1Q8R0S6 552 aa14.39□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Vmn1r83Q8R287 306 aa14.39□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Gje1Q9CX92 205 aa14.39□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Pfn4Q9D6I3 129 aa14.39□□□□□ -0.11
Retrieved 100 of 22,080 RNA–protein pairs in 81.8 ms