Protein–RNA interactions for Protein: Q8VE28

Nkd2, Protein naked cuticle homolog 2, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd2Q8VE28 Gm25239-201ENSMUST00000174915 86 ntBASIC33.88■■■■□ 3.01
Nkd2Q8VE28 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
Nkd2Q8VE28 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
Nkd2Q8VE28 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
Nkd2Q8VE28 Gm15042-201ENSMUST00000120212 883 ntBASIC29.47■■■□□ 2.31
Nkd2Q8VE28 Gm24109-201ENSMUST00000175489 103 ntBASIC29.42■■■□□ 2.3
Nkd2Q8VE28 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC29.25■■■□□ 2.27
Nkd2Q8VE28 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
Nkd2Q8VE28 Gm15045-201ENSMUST00000117359 883 ntBASIC28.73■■■□□ 2.19
Nkd2Q8VE28 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
Nkd2Q8VE28 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
Nkd2Q8VE28 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC28.64■■■□□ 2.18
Nkd2Q8VE28 Psd-208ENSMUST00000224556 2034 ntBASIC28.47■■■□□ 2.15
Nkd2Q8VE28 Gm23366-201ENSMUST00000175022 89 ntBASIC28.35■■■□□ 2.13
Nkd2Q8VE28 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
Nkd2Q8VE28 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Nkd2Q8VE28 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
Nkd2Q8VE28 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
Nkd2Q8VE28 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC27.52■■■□□ 2
Nkd2Q8VE28 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
Nkd2Q8VE28 AC153911.1-202ENSMUST00000218534 1034 ntBASIC27.49■■□□□ 1.99
Nkd2Q8VE28 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC27.29■■□□□ 1.96
Nkd2Q8VE28 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC27.28■■□□□ 1.96
Nkd2Q8VE28 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC27.23■■□□□ 1.95
Nkd2Q8VE28 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Nkd2Q8VE28 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Nkd2Q8VE28 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Nkd2Q8VE28 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Nkd2Q8VE28 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Nkd2Q8VE28 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Nkd2Q8VE28 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC26.91■■□□□ 1.9
Nkd2Q8VE28 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Nkd2Q8VE28 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Nkd2Q8VE28 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC26.87■■□□□ 1.89
Nkd2Q8VE28 Gm25238-201ENSMUST00000174914 89 ntBASIC26.77■■□□□ 1.88
Nkd2Q8VE28 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC26.77■■□□□ 1.88
Nkd2Q8VE28 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Nkd2Q8VE28 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC26.7■■□□□ 1.87
Nkd2Q8VE28 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Nkd2Q8VE28 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Nkd2Q8VE28 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Nkd2Q8VE28 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC26.46■■□□□ 1.83
Nkd2Q8VE28 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC26.39■■□□□ 1.82
Nkd2Q8VE28 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
Nkd2Q8VE28 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC26.38■■□□□ 1.81
Nkd2Q8VE28 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC26.36■■□□□ 1.81
Nkd2Q8VE28 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
Nkd2Q8VE28 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
Nkd2Q8VE28 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC26.23■■□□□ 1.79
Nkd2Q8VE28 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
Nkd2Q8VE28 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
Nkd2Q8VE28 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC26.11■■□□□ 1.77
Nkd2Q8VE28 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC26.08■■□□□ 1.77
Nkd2Q8VE28 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Nkd2Q8VE28 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC26.06■■□□□ 1.76
Nkd2Q8VE28 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Nkd2Q8VE28 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC25.93■■□□□ 1.74
Nkd2Q8VE28 Gm25262-201ENSMUST00000174934 133 ntBASIC25.84■■□□□ 1.73
Nkd2Q8VE28 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC25.81■■□□□ 1.72
Nkd2Q8VE28 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC25.79■■□□□ 1.72
Nkd2Q8VE28 Gm27325-201ENSMUST00000175467 74 ntBASIC25.79■■□□□ 1.72
Nkd2Q8VE28 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC25.72■■□□□ 1.71
Nkd2Q8VE28 Gm10524-201ENSMUST00000181931 1893 ntBASIC25.64■■□□□ 1.7
Nkd2Q8VE28 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Nkd2Q8VE28 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Nkd2Q8VE28 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC25.6■■□□□ 1.69
Nkd2Q8VE28 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Nkd2Q8VE28 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Nkd2Q8VE28 Gm42596-201ENSMUST00000196305 1958 ntBASIC25.54■■□□□ 1.68
Nkd2Q8VE28 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC25.52■■□□□ 1.68
Nkd2Q8VE28 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Nkd2Q8VE28 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Nkd2Q8VE28 Rab21-202ENSMUST00000218831 843 ntBASIC25.48■■□□□ 1.67
Nkd2Q8VE28 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC25.44■■□□□ 1.66
Nkd2Q8VE28 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC25.42■■□□□ 1.66
Nkd2Q8VE28 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Nkd2Q8VE28 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC25.36■■□□□ 1.65
Nkd2Q8VE28 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC25.36■■□□□ 1.65
Nkd2Q8VE28 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
Nkd2Q8VE28 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Nkd2Q8VE28 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
Nkd2Q8VE28 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
Nkd2Q8VE28 Gm26115-201ENSMUST00000175605 87 ntBASIC25.27■■□□□ 1.64
Nkd2Q8VE28 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC25.26■■□□□ 1.63
Nkd2Q8VE28 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC25.23■■□□□ 1.63
Nkd2Q8VE28 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC25.21■■□□□ 1.63
Nkd2Q8VE28 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
Nkd2Q8VE28 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Nkd2Q8VE28 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Nkd2Q8VE28 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Nkd2Q8VE28 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
Nkd2Q8VE28 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC25.1■■□□□ 1.61
Nkd2Q8VE28 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Nkd2Q8VE28 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC25.06■■□□□ 1.6
Nkd2Q8VE28 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC25.06■■□□□ 1.6
Nkd2Q8VE28 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Nkd2Q8VE28 Gm8109-201ENSMUST00000194076 746 ntBASIC25.03■■□□□ 1.6
Nkd2Q8VE28 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC24.99■■□□□ 1.59
Nkd2Q8VE28 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC24.95■■□□□ 1.58
Nkd2Q8VE28 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC24.94■■□□□ 1.58
Retrieved 100 of 76,532 protein–RNA pairs in 92.1 ms