RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 MMEL1Q495T6 779 aa11.76□□□□□ -0.53
SNX1-214ENST00000625244 GKAP1Q5VSY0 366 aaPredicted RBP11.76□□□□□ -0.53
SNX1-214ENST00000625244 CLEC6AQ6EIG7 209 aa11.76□□□□□ -0.53
SNX1-214ENST00000625244 C9orf139Q6ZV77 190 aa11.76□□□□□ -0.53
SNX1-214ENST00000625244 DDIASQ8IXT1 998 aa11.76□□□□□ -0.53
SNX1-214ENST00000625244 ARFGAP2Q8N6H7 521 aa11.76□□□□□ -0.53
SNX1-214ENST00000625244 OR5D16Q8NGK9 328 aa11.76□□□□□ -0.53
SNX1-214ENST00000625244 AGR3Q8TD06 166 aa11.76□□□□□ -0.53
SNX1-214ENST00000625244 RAB1CQ92928 201 aa11.76□□□□□ -0.53
SNX1-214ENST00000625244 OR7D2Q96RA2 312 aa11.76□□□□□ -0.53
SNX1-214ENST00000625244 LINC00470Q9BZP3 86 aa11.76□□□□□ -0.53
SNX1-214ENST00000625244 TCF7L1Q9HCS4 588 aa11.76□□□□□ -0.53
SNX1-214ENST00000625244 HINT3Q9NQE9 182 aaKnown RBP11.76□□□□□ -0.53
SNX1-214ENST00000625244 INTS9Q9NV88 658 aaKnown RBP11.76□□□□□ -0.53
SNX1-214ENST00000625244 ZNF446Q9NWS9 450 aa11.76□□□□□ -0.53
SNX1-214ENST00000625244 TAAR3PQ9P1P4 343 aa11.76□□□□□ -0.53
SNX1-214ENST00000625244 OSGIN1Q9UJX0 560 aa11.76□□□□□ -0.53
SNX1-214ENST00000625244 FAF1Q9UNN5 650 aaPredicted RBP11.76□□□□□ -0.53
SNX1-214ENST00000625244 LIPT2A6NK58 231 aa11.75□□□□□ -0.53
SNX1-214ENST00000625244 RPL36A-HNRNPH2H7BZ11 118 aa11.75□□□□□ -0.53
SNX1-214ENST00000625244 ZNF208O43345 1280 aa11.75□□□□□ -0.53
SNX1-214ENST00000625244 CLPXO76031 633 aa11.75□□□□□ -0.53
SNX1-214ENST00000625244 ZNF432O94892 652 aa11.75□□□□□ -0.53
SNX1-214ENST00000625244 HLA-HP01893 362 aa11.75□□□□□ -0.53
SNX1-214ENST00000625244 IDH2P48735 452 aaKnown RBP11.75□□□□□ -0.53
SNX1-214ENST00000625244 CCT3P49368 545 aaKnown RBP11.75□□□□□ -0.53
SNX1-214ENST00000625244 WDR4P57081 412 aaKnown RBP11.75□□□□□ -0.53
SNX1-214ENST00000625244 PDE7AQ13946 482 aa11.75□□□□□ -0.53
SNX1-214ENST00000625244 OR7A5Q15622 319 aa11.75□□□□□ -0.53
SNX1-214ENST00000625244 TRMT5Q32P41 509 aaKnown RBP11.75□□□□□ -0.53
SNX1-214ENST00000625244 KANK2Q63ZY3 851 aa11.75□□□□□ -0.53
SNX1-214ENST00000625244 USP51Q70EK9 711 aa11.75□□□□□ -0.53
SNX1-214ENST00000625244 TRIM46Q7Z4K8 759 aa11.75□□□□□ -0.53
SNX1-214ENST00000625244 EPHX4Q8IUS5 362 aa11.75□□□□□ -0.53
SNX1-214ENST00000625244 CLHC1Q8NHS4 586 aa11.75□□□□□ -0.53
SNX1-214ENST00000625244 LRRC8CQ8TDW0 803 aa11.75□□□□□ -0.53
SNX1-214ENST00000625244 ST7LQ8TDW4 575 aa11.75□□□□□ -0.53
SNX1-214ENST00000625244 PMM1Q92871 262 aa11.75□□□□□ -0.53
SNX1-214ENST00000625244 TIMD4Q96H15 378 aa11.75□□□□□ -0.53
SNX1-214ENST00000625244 ZNF75AQ96N20 296 aa11.75□□□□□ -0.53
SNX1-214ENST00000625244 TSPAN32Q96QS1 320 aa11.75□□□□□ -0.53
SNX1-214ENST00000625244 CCT7Q99832 543 aa11.75□□□□□ -0.53
SNX1-214ENST00000625244 MRI1Q9BV20 369 aa11.75□□□□□ -0.53
SNX1-214ENST00000625244 B3GNT2Q9NY97 397 aa11.75□□□□□ -0.53
SNX1-214ENST00000625244 ASH2LQ9UBL3 628 aa11.75□□□□□ -0.53
SNX1-214ENST00000625244 SEC14L4Q9UDX3 406 aa11.75□□□□□ -0.53
SNX1-214ENST00000625244 MKLN1Q9UL63 735 aa11.75□□□□□ -0.53
SNX1-214ENST00000625244 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.75□□□□□ -0.53
SNX1-214ENST00000625244 RAP2CQ9Y3L5 183 aa11.75□□□□□ -0.53
SNX1-214ENST00000625244 INSIG2Q9Y5U4 225 aa11.75□□□□□ -0.53
SNX1-214ENST00000625244 DNAH1Q9P2D7 4330 aa11.74□□□□□ -0.53
SNX1-214ENST00000625244 ISPDA4D126 451 aa11.74□□□□□ -0.53
SNX1-214ENST00000625244 SRRM5B3KS81 715 aa11.74□□□□□ -0.53
SNX1-214ENST00000625244 CLPTM1O96005 669 aa11.74□□□□□ -0.53
SNX1-214ENST00000625244 ZNF14P17017 642 aaPredicted RBP11.74□□□□□ -0.53
SNX1-214ENST00000625244 PROK1P58294 105 aa11.74□□□□□ -0.53
SNX1-214ENST00000625244 RPS23P62266 143 aaKnown RBP11.74□□□□□ -0.53
SNX1-214ENST00000625244 TEKQ02763 1124 aa11.74□□□□□ -0.53
SNX1-214ENST00000625244 PLAURQ03405 335 aa11.74□□□□□ -0.53
SNX1-214ENST00000625244 C2orf68Q2NKX9 166 aa11.74□□□□□ -0.53
SNX1-214ENST00000625244 PCGF3Q3KNV8 242 aa11.74□□□□□ -0.53
SNX1-214ENST00000625244 TMEM225Q6GV28 225 aa11.74□□□□□ -0.53
SNX1-214ENST00000625244 TMEM154Q6P9G4 183 aa11.74□□□□□ -0.53
SNX1-214ENST00000625244 PARP8Q8N3A8 854 aa11.74□□□□□ -0.53
SNX1-214ENST00000625244 OR52E2Q8NGJ4 325 aa11.74□□□□□ -0.53
SNX1-214ENST00000625244 TWIST2Q8WVJ9 160 aa11.74□□□□□ -0.53
SNX1-214ENST00000625244 GTF3AQ92664 365 aaKnown RBP11.74□□□□□ -0.53
SNX1-214ENST00000625244 TSSK3Q96PN8 268 aa11.74□□□□□ -0.53
SNX1-214ENST00000625244 CHIAQ9BZP6 476 aa11.74□□□□□ -0.53
SNX1-214ENST00000625244 MARCH7Q9H992 704 aa11.74□□□□□ -0.53
SNX1-214ENST00000625244 GPR35Q9HC97 309 aa11.74□□□□□ -0.53
SNX1-214ENST00000625244 THAP1Q9NVV9 213 aa11.74□□□□□ -0.53
SNX1-214ENST00000625244 BAIAP2L1Q9UHR4 511 aa11.74□□□□□ -0.53
SNX1-214ENST00000625244 CCL27Q9Y4X3 112 aa11.74□□□□□ -0.53
SNX1-214ENST00000625244 DSPPQ9NZW4 1301 aa11.74□□□□□ -0.53
SNX1-214ENST00000625244 C5orf63A6NC05 138 aa11.73□□□□□ -0.53
SNX1-214ENST00000625244 AP3D1O14617 1153 aa11.73□□□□□ -0.53
SNX1-214ENST00000625244 PLXNB1O43157 2135 aa11.73□□□□□ -0.53
SNX1-214ENST00000625244 SEC22BO75396 215 aa11.73□□□□□ -0.53
SNX1-214ENST00000625244 LYPLA1O75608 230 aaPredicted RBP11.73□□□□□ -0.53
SNX1-214ENST00000625244 IGHMP01871 453 aa11.73□□□□□ -0.53
SNX1-214ENST00000625244 GPIP06744 558 aa11.73□□□□□ -0.53
SNX1-214ENST00000625244 KRT16P08779 473 aa11.73□□□□□ -0.53
SNX1-214ENST00000625244 SDC1P18827 310 aa11.73□□□□□ -0.53
SNX1-214ENST00000625244 NUP214P35658 2090 aaPredicted RBP11.73□□□□□ -0.53
SNX1-214ENST00000625244 HTR3AP46098 478 aa11.73□□□□□ -0.53
SNX1-214ENST00000625244 RPL14P50914 215 aaKnown RBP11.73□□□□□ -0.53
SNX1-214ENST00000625244 RPS26P62854 115 aaKnown RBP11.73□□□□□ -0.53
SNX1-214ENST00000625244 PIGFQ07326 219 aa11.73□□□□□ -0.53
SNX1-214ENST00000625244 BST1Q10588 318 aa11.73□□□□□ -0.53
SNX1-214ENST00000625244 CEACAM16Q2WEN9 425 aa11.73□□□□□ -0.53
SNX1-214ENST00000625244 HFEQ30201 348 aa11.73□□□□□ -0.53
SNX1-214ENST00000625244 DEFB112Q30KQ8 113 aa11.73□□□□□ -0.53
SNX1-214ENST00000625244 RUSC1-AS1Q66K80 236 aa11.73□□□□□ -0.53
SNX1-214ENST00000625244 CCBE1Q6UXH8 406 aaPredicted RBP11.73□□□□□ -0.53
SNX1-214ENST00000625244 RNF165Q6ZSG1 346 aa11.73□□□□□ -0.53
SNX1-214ENST00000625244 CCDC36Q8IYA8 594 aa11.73□□□□□ -0.53
SNX1-214ENST00000625244 OR56A1Q8NGH5 318 aa11.73□□□□□ -0.53
SNX1-214ENST00000625244 LINC01006Q8NI28 216 aa11.73□□□□□ -0.53
SNX1-214ENST00000625244 SLC6A13Q9NSD5 602 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms