RNA–Protein interactions for RNA: ENST00000557768.1

HNRNPC-233, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-233ENST00000557768 ARFIP1P53367 373 aa4.79□□□□□ -1.64
HNRNPC-233ENST00000557768 MAPK12P53778 367 aa4.79□□□□□ -1.64
HNRNPC-233ENST00000557768 ATP5J2P56134 94 aa4.79□□□□□ -1.64
HNRNPC-233ENST00000557768 CLDN15P56746 228 aa4.79□□□□□ -1.64
HNRNPC-233ENST00000557768 GPX6P59796 221 aa4.79□□□□□ -1.64
HNRNPC-233ENST00000557768 DMTNQ08495 405 aa4.79□□□□□ -1.64
HNRNPC-233ENST00000557768 ACSM1Q08AH1 577 aa4.79□□□□□ -1.64
HNRNPC-233ENST00000557768 SNTA1Q13424 505 aa4.79□□□□□ -1.64
HNRNPC-233ENST00000557768 TNK1Q13470 666 aa4.79□□□□□ -1.64
HNRNPC-233ENST00000557768 GTF2H2Q13888 395 aa4.79□□□□□ -1.64
HNRNPC-233ENST00000557768 CAPRIN1Q14444 709 aaKnown RBP4.79□□□□□ -1.64
HNRNPC-233ENST00000557768 EXOC3L2Q2M3D2 409 aa4.79□□□□□ -1.64
HNRNPC-233ENST00000557768 VWC2Q2TAL6 325 aa4.79□□□□□ -1.64
HNRNPC-233ENST00000557768 TRMT12Q53H54 448 aaKnown RBP4.79□□□□□ -1.64
HNRNPC-233ENST00000557768 PIK3CD-AS1Q5SR53 167 aa4.79□□□□□ -1.64
HNRNPC-233ENST00000557768 CCNYL2Q5T2Q4 361 aa4.79□□□□□ -1.64
HNRNPC-233ENST00000557768 LIPJQ5W064 366 aa4.79□□□□□ -1.64
HNRNPC-233ENST00000557768 FAM219BQ5XKK7 198 aa4.79□□□□□ -1.64
HNRNPC-233ENST00000557768 OR2A2Q6IF42 318 aa4.79□□□□□ -1.64
HNRNPC-233ENST00000557768 GTF2H2CQ6P1K8 395 aa4.79□□□□□ -1.64
HNRNPC-233ENST00000557768 SCIMPQ6UWF3 145 aa4.79□□□□□ -1.64
HNRNPC-233ENST00000557768 ZNF704Q6ZNC4 412 aaPredicted RBP4.79□□□□□ -1.64
HNRNPC-233ENST00000557768 CHMP1BQ7LBR1 199 aa4.79□□□□□ -1.64
HNRNPC-233ENST00000557768 GOLGA7Q7Z5G4 137 aa4.79□□□□□ -1.64
HNRNPC-233ENST00000557768 PLCZ1Q86YW0 608 aa4.79□□□□□ -1.64
HNRNPC-233ENST00000557768 CTAGE3PQ8IX95 158 aa4.79□□□□□ -1.64
HNRNPC-233ENST00000557768 PHC2Q8IXK0 858 aa4.79□□□□□ -1.64
HNRNPC-233ENST00000557768 TEX45Q8NA69 505 aa4.79□□□□□ -1.64
HNRNPC-233ENST00000557768 OR52R1Q8NGF1 315 aa4.79□□□□□ -1.64
HNRNPC-233ENST00000557768 OR5M1Q8NGP8 315 aa4.79□□□□□ -1.64
HNRNPC-233ENST00000557768 WDR20Q8TBZ3 569 aa4.79□□□□□ -1.64
HNRNPC-233ENST00000557768 KCTD4Q8WVF5 259 aa4.79□□□□□ -1.64
HNRNPC-233ENST00000557768 CDKL2Q92772 493 aa4.79□□□□□ -1.64
HNRNPC-233ENST00000557768 COL21A1Q96P44 957 aa4.79□□□□□ -1.64
HNRNPC-233ENST00000557768 CPNE1Q99829 537 aa4.79□□□□□ -1.64
HNRNPC-233ENST00000557768 SLC39A3Q9BRY0 314 aa4.79□□□□□ -1.64
HNRNPC-233ENST00000557768 QTRT1Q9BXR0 403 aaKnown RBP4.79□□□□□ -1.64
HNRNPC-233ENST00000557768 ESRP2Q9H6T0 727 aaKnown RBP4.79□□□□□ -1.64
HNRNPC-233ENST00000557768 ANKRA2Q9H9E1 313 aa4.79□□□□□ -1.64
HNRNPC-233ENST00000557768 ELOVL5Q9NYP7 299 aa4.79□□□□□ -1.64
HNRNPC-233ENST00000557768 MAT2BQ9NZL9 334 aa4.79□□□□□ -1.64
HNRNPC-233ENST00000557768 ZNF639Q9UID6 485 aa4.79□□□□□ -1.64
HNRNPC-233ENST00000557768 DKKL1Q9UK85 242 aa4.79□□□□□ -1.64
HNRNPC-233ENST00000557768 HEATR1Q9H583 2144 aaKnown RBP4.79□□□□□ -1.64
HNRNPC-233ENST00000557768 A0A1W2PRV1 198 aa4.78□□□□□ -1.64
HNRNPC-233ENST00000557768 GOLGA6L10A6NI86 522 aa4.78□□□□□ -1.64
HNRNPC-233ENST00000557768 OR6C70A6NIJ9 312 aa4.78□□□□□ -1.64
HNRNPC-233ENST00000557768 PPP6CO00743 305 aa4.78□□□□□ -1.64
HNRNPC-233ENST00000557768 SCO2O43819 266 aa4.78□□□□□ -1.64
HNRNPC-233ENST00000557768 TSPAN2O60636 221 aa4.78□□□□□ -1.64
HNRNPC-233ENST00000557768 SEMA3DO95025 777 aa4.78□□□□□ -1.64
HNRNPC-233ENST00000557768 CLDN9O95484 217 aa4.78□□□□□ -1.64
HNRNPC-233ENST00000557768 CGAP01215 116 aa4.78□□□□□ -1.64
HNRNPC-233ENST00000557768 ATP1B1P05026 303 aa4.78□□□□□ -1.64
HNRNPC-233ENST00000557768 CRHP06850 196 aa4.78□□□□□ -1.64
HNRNPC-233ENST00000557768 CT45A8P0DMV1 189 aa4.78□□□□□ -1.64
HNRNPC-233ENST00000557768 CT45A9P0DMV2 189 aa4.78□□□□□ -1.64
HNRNPC-233ENST00000557768 CSNK2A2P19784 350 aaPredicted RBP4.78□□□□□ -1.64
HNRNPC-233ENST00000557768 TBXA2RP21731 343 aa4.78□□□□□ -1.64
HNRNPC-233ENST00000557768 DPP4P27487 766 aa4.78□□□□□ -1.64
HNRNPC-233ENST00000557768 CRABP2P29373 138 aa4.78□□□□□ -1.64
HNRNPC-233ENST00000557768 GABRA5P31644 462 aa4.78□□□□□ -1.64
HNRNPC-233ENST00000557768 SPRP35270 261 aaPredicted RBP4.78□□□□□ -1.64
HNRNPC-233ENST00000557768 DEKP35659 375 aaKnown RBP4.78□□□□□ -1.64
HNRNPC-233ENST00000557768 PPICP45877 212 aa4.78□□□□□ -1.64
HNRNPC-233ENST00000557768 PCYT1AP49585 367 aa4.78□□□□□ -1.64
HNRNPC-233ENST00000557768 EMDP50402 254 aa4.78□□□□□ -1.64
HNRNPC-233ENST00000557768 SUCLG1P53597 346 aaKnown RBP4.78□□□□□ -1.64
HNRNPC-233ENST00000557768 GAS1P54826 345 aa4.78□□□□□ -1.64
HNRNPC-233ENST00000557768 CLDN20P56880 219 aa4.78□□□□□ -1.64
HNRNPC-233ENST00000557768 ILF2Q12905 390 aaKnown RBP4.78□□□□□ -1.64
HNRNPC-233ENST00000557768 HSPB3Q12988 150 aa4.78□□□□□ -1.64
HNRNPC-233ENST00000557768 VEZF1Q14119 521 aa4.78□□□□□ -1.64
HNRNPC-233ENST00000557768 BCL2A1Q16548 175 aa4.78□□□□□ -1.64
HNRNPC-233ENST00000557768 CLEC12BQ2HXU8 276 aa4.78□□□□□ -1.64
HNRNPC-233ENST00000557768 CT45A2Q5DJT8 189 aa4.78□□□□□ -1.64
HNRNPC-233ENST00000557768 C6orf136Q5SQH8 315 aa4.78□□□□□ -1.64
HNRNPC-233ENST00000557768 GRTP1Q5TC63 336 aa4.78□□□□□ -1.64
HNRNPC-233ENST00000557768 ZNF626Q68DY1 528 aa4.78□□□□□ -1.64
HNRNPC-233ENST00000557768 TTC19Q6DKK2 380 aaPredicted RBP4.78□□□□□ -1.64
HNRNPC-233ENST00000557768 RAB12Q6IQ22 244 aa4.78□□□□□ -1.64
HNRNPC-233ENST00000557768 SLC48A1Q6P1K1 146 aa4.78□□□□□ -1.64
HNRNPC-233ENST00000557768 C3orf62Q6ZUJ4 267 aa4.78□□□□□ -1.64
HNRNPC-233ENST00000557768 COMMD6Q7Z4G1 85 aa4.78□□□□□ -1.64
HNRNPC-233ENST00000557768 PATL1Q86TB9 770 aaKnown RBP4.78□□□□□ -1.64
HNRNPC-233ENST00000557768 CENPLQ8N0S6 344 aaPredicted RBP4.78□□□□□ -1.64
HNRNPC-233ENST00000557768 L3MBTL4Q8NA19 623 aa4.78□□□□□ -1.64
HNRNPC-233ENST00000557768 NHLRC2Q8NBF2 726 aa4.78□□□□□ -1.64
HNRNPC-233ENST00000557768 OR2M3Q8NG83 312 aa4.78□□□□□ -1.64
HNRNPC-233ENST00000557768 OR52B6Q8NGF0 335 aa4.78□□□□□ -1.64
HNRNPC-233ENST00000557768 FNDC9Q8TBE3 224 aa4.78□□□□□ -1.64
HNRNPC-233ENST00000557768 IGFBPL1Q8WX77 278 aa4.78□□□□□ -1.64
HNRNPC-233ENST00000557768 ROBO4Q8WZ75 1007 aa4.78□□□□□ -1.64
HNRNPC-233ENST00000557768 EFHD2Q96C19 240 aaPredicted RBP4.78□□□□□ -1.64
HNRNPC-233ENST00000557768 CNRIP1Q96F85 164 aaPredicted RBP4.78□□□□□ -1.64
HNRNPC-233ENST00000557768 MS4A10Q96PG2 267 aa4.78□□□□□ -1.64
HNRNPC-233ENST00000557768 SERPINI1Q99574 410 aa4.78□□□□□ -1.64
HNRNPC-233ENST00000557768 PINK1Q9BXM7 581 aa4.78□□□□□ -1.64
HNRNPC-233ENST00000557768 DPH5Q9H2P9 285 aa4.78□□□□□ -1.64
HNRNPC-233ENST00000557768 DSN1Q9H410 356 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms