RNA–Protein interactions for RNA: ENST00000556839.5

RALGAPA1-215, Transcript of Ral GTPase activating protein catalytic alpha subunit 1, human

TSL 3

Gene RALGAPA1, Length 1,305 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RALGAPA1-215	ENST00000556839	KRTAP9-6	A8MVA2	160 aa		4.74	□□□□□ -1.65
RALGAPA1-215	ENST00000556839	ANHX	E9PGG2	379 aa		4.74	□□□□□ -1.65
RALGAPA1-215	ENST00000556839		H3BMQ9	156 aa		4.74	□□□□□ -1.65
RALGAPA1-215	ENST00000556839	SMLR1	H3BR10	107 aa		4.74	□□□□□ -1.65
RALGAPA1-215	ENST00000556839		I3L1I5	382 aa	Predicted RBP	4.74	□□□□□ -1.65
RALGAPA1-215	ENST00000556839	BCKDK	O14874	412 aa		4.74	□□□□□ -1.65
RALGAPA1-215	ENST00000556839	EMC8	O43402	210 aa		4.74	□□□□□ -1.65
RALGAPA1-215	ENST00000556839	OR10H2	O60403	315 aa		4.74	□□□□□ -1.65
RALGAPA1-215	ENST00000556839	KDM4B	O94953	1096 aa		4.74	□□□□□ -1.65
RALGAPA1-215	ENST00000556839	NDUFB10	O96000	172 aa		4.74	□□□□□ -1.65
RALGAPA1-215	ENST00000556839	IFNA17	P01571	189 aa		4.74	□□□□□ -1.65
RALGAPA1-215	ENST00000556839	RPN2	P04844	631 aa		4.74	□□□□□ -1.65
RALGAPA1-215	ENST00000556839	GYPC	P04921	128 aa		4.74	□□□□□ -1.65
RALGAPA1-215	ENST00000556839	ETFA	P13804	333 aa		4.74	□□□□□ -1.65
RALGAPA1-215	ENST00000556839	GABRA1	P14867	456 aa		4.74	□□□□□ -1.65
RALGAPA1-215	ENST00000556839	HIST1H1B	P16401	226 aa	Known RBP	4.74	□□□□□ -1.65
RALGAPA1-215	ENST00000556839	TSPAN8	P19075	237 aa		4.74	□□□□□ -1.65
RALGAPA1-215	ENST00000556839	UQCRC2	P22695	453 aa		4.74	□□□□□ -1.65
RALGAPA1-215	ENST00000556839	HLA-DMA	P28067	261 aa		4.74	□□□□□ -1.65
RALGAPA1-215	ENST00000556839	GNRHR	P30968	328 aa		4.74	□□□□□ -1.65
RALGAPA1-215	ENST00000556839	SDC4	P31431	198 aa		4.74	□□□□□ -1.65
RALGAPA1-215	ENST00000556839	TIMP3	P35625	211 aa		4.74	□□□□□ -1.65
RALGAPA1-215	ENST00000556839	HTR5A	P47898	357 aa		4.74	□□□□□ -1.65
RALGAPA1-215	ENST00000556839	RFX2	P48378	723 aa		4.74	□□□□□ -1.65
RALGAPA1-215	ENST00000556839	RPL14	P50914	215 aa	Known RBP	4.74	□□□□□ -1.65
RALGAPA1-215	ENST00000556839	XK	P51811	444 aa		4.74	□□□□□ -1.65
RALGAPA1-215	ENST00000556839	CDH11	P55287	796 aa		4.74	□□□□□ -1.65
RALGAPA1-215	ENST00000556839	KLF3	P57682	345 aa	Predicted RBP	4.74	□□□□□ -1.65
RALGAPA1-215	ENST00000556839	VSX2	P58304	361 aa	Predicted RBP	4.74	□□□□□ -1.65
RALGAPA1-215	ENST00000556839	ABCE1	P61221	599 aa	Known RBP	4.74	□□□□□ -1.65
RALGAPA1-215	ENST00000556839	LSM6	P62312	80 aa	Known RBP	4.74	□□□□□ -1.65
RALGAPA1-215	ENST00000556839	CSNK2A1	P68400	391 aa	Predicted RBP	4.74	□□□□□ -1.65
RALGAPA1-215	ENST00000556839	CSTF1	Q05048	431 aa	Known RBP	4.74	□□□□□ -1.65
RALGAPA1-215	ENST00000556839	ZFP36L1	Q07352	338 aa	Known RBP	4.74	□□□□□ -1.65
RALGAPA1-215	ENST00000556839	SERTAD2	Q14140	314 aa		4.74	□□□□□ -1.65
RALGAPA1-215	ENST00000556839	OR4D1	Q15615	310 aa		4.74	□□□□□ -1.65
RALGAPA1-215	ENST00000556839	VAMP3	Q15836	100 aa		4.74	□□□□□ -1.65
RALGAPA1-215	ENST00000556839	COX19	Q49B96	90 aa		4.74	□□□□□ -1.65
RALGAPA1-215	ENST00000556839		Q5BKY6	102 aa		4.74	□□□□□ -1.65
RALGAPA1-215	ENST00000556839	PIK3CD-AS1	Q5SR53	167 aa		4.74	□□□□□ -1.65
RALGAPA1-215	ENST00000556839	ZNF691	Q5VV52	312 aa		4.74	□□□□□ -1.65
RALGAPA1-215	ENST00000556839	PRAMEF8	Q5VWM4	474 aa		4.74	□□□□□ -1.65
RALGAPA1-215	ENST00000556839	PRAMEF7	Q5VXH5	474 aa		4.74	□□□□□ -1.65
RALGAPA1-215	ENST00000556839	ANKRD22	Q5VYY1	191 aa		4.74	□□□□□ -1.65
RALGAPA1-215	ENST00000556839	TRIQK	Q629K1	86 aa		4.74	□□□□□ -1.65
RALGAPA1-215	ENST00000556839	SCIMP	Q6UWF3	145 aa		4.74	□□□□□ -1.65
RALGAPA1-215	ENST00000556839	BAIAP2L2	Q6UXY1	529 aa		4.74	□□□□□ -1.65
RALGAPA1-215	ENST00000556839	ZNF562	Q6V9R5	426 aa		4.74	□□□□□ -1.65
RALGAPA1-215	ENST00000556839	WDR88	Q6ZMY6	472 aa		4.74	□□□□□ -1.65
RALGAPA1-215	ENST00000556839	TCF24	Q7RTU0	167 aa		4.74	□□□□□ -1.65
RALGAPA1-215	ENST00000556839	ADCK2	Q7Z695	626 aa		4.74	□□□□□ -1.65
RALGAPA1-215	ENST00000556839	ABI3BP	Q7Z7G0	1075 aa		4.74	□□□□□ -1.65
RALGAPA1-215	ENST00000556839	DHDDS	Q86SQ9	333 aa		4.74	□□□□□ -1.65
RALGAPA1-215	ENST00000556839	SLC22A16	Q86VW1	577 aa		4.74	□□□□□ -1.65
RALGAPA1-215	ENST00000556839	PAQR7	Q86WK9	346 aa		4.74	□□□□□ -1.65
RALGAPA1-215	ENST00000556839	COMMD2	Q86X83	199 aa		4.74	□□□□□ -1.65
RALGAPA1-215	ENST00000556839	C10orf107	Q8IVU9	208 aa		4.74	□□□□□ -1.65
RALGAPA1-215	ENST00000556839	NAXD	Q8IW45	347 aa		4.74	□□□□□ -1.65
RALGAPA1-215	ENST00000556839	DCUN1D3	Q8IWE4	304 aa		4.74	□□□□□ -1.65
RALGAPA1-215	ENST00000556839	HS3ST5	Q8IZT8	346 aa		4.74	□□□□□ -1.65
RALGAPA1-215	ENST00000556839	ZCCHC9	Q8N567	271 aa	Known RBP	4.74	□□□□□ -1.65
RALGAPA1-215	ENST00000556839	CLDN22	Q8N7P3	220 aa		4.74	□□□□□ -1.65
RALGAPA1-215	ENST00000556839	ZNF383	Q8NA42	475 aa		4.74	□□□□□ -1.65
RALGAPA1-215	ENST00000556839	TMEM161B	Q8NDZ6	487 aa		4.74	□□□□□ -1.65
RALGAPA1-215	ENST00000556839	CSNK2A3	Q8NEV1	391 aa		4.74	□□□□□ -1.65
RALGAPA1-215	ENST00000556839	GJC3	Q8NFK1	279 aa		4.74	□□□□□ -1.65
RALGAPA1-215	ENST00000556839	TSPAN14	Q8NG11	270 aa		4.74	□□□□□ -1.65
RALGAPA1-215	ENST00000556839	OR10S1	Q8NGN2	331 aa		4.74	□□□□□ -1.65
RALGAPA1-215	ENST00000556839	LMO3	Q8TAP4	145 aa		4.74	□□□□□ -1.65
RALGAPA1-215	ENST00000556839	RNASE8	Q8TDE3	154 aa	Known RBP	4.74	□□□□□ -1.65
RALGAPA1-215	ENST00000556839	DEDD2	Q8WXF8	326 aa		4.74	□□□□□ -1.65
RALGAPA1-215	ENST00000556839	C11orf40	Q8WZ69	217 aa		4.74	□□□□□ -1.65
RALGAPA1-215	ENST00000556839	RIT1	Q92963	219 aa		4.74	□□□□□ -1.65
RALGAPA1-215	ENST00000556839	PPWD1	Q96BP3	646 aa	Known RBP	4.74	□□□□□ -1.65
RALGAPA1-215	ENST00000556839	COL21A1	Q96P44	957 aa		4.74	□□□□□ -1.65
RALGAPA1-215	ENST00000556839	CNN2	Q99439	309 aa	Known RBP	4.74	□□□□□ -1.65
RALGAPA1-215	ENST00000556839	CHRDL1	Q9BU40	450 aa		4.74	□□□□□ -1.65
RALGAPA1-215	ENST00000556839	NDUFAF3	Q9BU61	184 aa		4.74	□□□□□ -1.65
RALGAPA1-215	ENST00000556839	ZNF426	Q9BUY5	554 aa		4.74	□□□□□ -1.65
RALGAPA1-215	ENST00000556839	C1QTNF1	Q9BXJ1	281 aa		4.74	□□□□□ -1.65
RALGAPA1-215	ENST00000556839	ULBP1	Q9BZM6	244 aa		4.74	□□□□□ -1.65
RALGAPA1-215	ENST00000556839	TMEM38A	Q9H6F2	299 aa		4.74	□□□□□ -1.65
RALGAPA1-215	ENST00000556839	AAMDC	Q9H7C9	122 aa		4.74	□□□□□ -1.65
RALGAPA1-215	ENST00000556839	WDR54	Q9H977	334 aa		4.74	□□□□□ -1.65
RALGAPA1-215	ENST00000556839	SLC28A3	Q9HAS3	691 aa		4.74	□□□□□ -1.65
RALGAPA1-215	ENST00000556839	HRASLS	Q9HDD0	168 aa		4.74	□□□□□ -1.65
RALGAPA1-215	ENST00000556839	POLE4	Q9NR33	117 aa		4.74	□□□□□ -1.65
RALGAPA1-215	ENST00000556839	RDH8	Q9NYR8	311 aa		4.74	□□□□□ -1.65
RALGAPA1-215	ENST00000556839	PTTG3P	Q9NZH4	202 aa		4.74	□□□□□ -1.65
RALGAPA1-215	ENST00000556839	GHRL	Q9UBU3	117 aa		4.74	□□□□□ -1.65
RALGAPA1-215	ENST00000556839	FBXL3	Q9UKT7	428 aa		4.74	□□□□□ -1.65
RALGAPA1-215	ENST00000556839	STUB1	Q9UNE7	303 aa		4.74	□□□□□ -1.65
RALGAPA1-215	ENST00000556839	FBXO7	Q9Y3I1	522 aa		4.74	□□□□□ -1.65
RALGAPA1-215	ENST00000556839	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	4.74	□□□□□ -1.65
RALGAPA1-215	ENST00000556839	PTGDR2	Q9Y5Y4	395 aa		4.74	□□□□□ -1.65
RALGAPA1-215	ENST00000556839	URGCP-MRPS24	S4R325	110 aa		4.74	□□□□□ -1.65
RALGAPA1-215	ENST00000556839	MRC1	P22897	1456 aa		4.74	□□□□□ -1.65
RALGAPA1-215	ENST00000556839	ARHGAP23	Q9P227	1491 aa		4.74	□□□□□ -1.65
RALGAPA1-215	ENST00000556839	NEDD4	P46934	1319 aa		4.74	□□□□□ -1.65
RALGAPA1-215	ENST00000556839	DOCK7	Q96N67	2140 aa		4.74	□□□□□ -1.65

Retrieved 100 of 20,778 RNA–protein pairs in 148.7 ms