RNA–Protein interactions for RNA: ENST00000486975.1

CLDN11-207, Transcript of claudin 11, humanhuman

TSL 2 BASIC

Gene CLDN11, Length 1,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-207ENST00000486975 NANOGQ9H9S0 305 aa12.57□□□□□ -0.4
CLDN11-207ENST00000486975 PGPEP1Q9NXJ5 209 aa12.57□□□□□ -0.4
CLDN11-207ENST00000486975 ZANQ9Y493 2812 aa12.56□□□□□ -0.4
CLDN11-207ENST00000486975 IGHV1-18A0A0C4DH31 117 aa12.56□□□□□ -0.4
CLDN11-207ENST00000486975 BBIP1A8MTZ0 92 aa12.56□□□□□ -0.4
CLDN11-207ENST00000486975 ATP6V1G2-DDX39BF2Z307 99 aa12.56□□□□□ -0.4
CLDN11-207ENST00000486975 MS4A18H0YCH9 400 aa12.56□□□□□ -0.4
CLDN11-207ENST00000486975 M0R3H8 397 aa12.56□□□□□ -0.4
CLDN11-207ENST00000486975 FXYD1O00168 92 aa12.56□□□□□ -0.4
CLDN11-207ENST00000486975 HPRP00739 348 aa12.56□□□□□ -0.4
CLDN11-207ENST00000486975 IGKV3-15P01624 115 aa12.56□□□□□ -0.4
CLDN11-207ENST00000486975 IGLV1-44P01699 117 aa12.56□□□□□ -0.4
CLDN11-207ENST00000486975 OPN1SWP03999 348 aa12.56□□□□□ -0.4
CLDN11-207ENST00000486975 BMP4P12644 408 aa12.56□□□□□ -0.4
CLDN11-207ENST00000486975 NQO1P15559 274 aaKnown RBP12.56□□□□□ -0.4
CLDN11-207ENST00000486975 APOBEC3AP31941 199 aaPredicted RBP12.56□□□□□ -0.4
CLDN11-207ENST00000486975 KRTAP1-1Q07627 177 aa12.56□□□□□ -0.4
CLDN11-207ENST00000486975 PUDPQ08623 228 aa12.56□□□□□ -0.4
CLDN11-207ENST00000486975 MS4A18Q3C1V0 323 aa12.56□□□□□ -0.4
CLDN11-207ENST00000486975 CALHM3Q86XJ0 350 aa12.56□□□□□ -0.4
CLDN11-207ENST00000486975 UEVLDQ8IX04 471 aa12.56□□□□□ -0.4
CLDN11-207ENST00000486975 CCDC36Q8IYA8 594 aa12.56□□□□□ -0.4
CLDN11-207ENST00000486975 GPR137CQ8N3F9 429 aa12.56□□□□□ -0.4
CLDN11-207ENST00000486975 TAMM41Q96BW9 452 aa12.56□□□□□ -0.4
CLDN11-207ENST00000486975 LRR1Q96L50 414 aa12.56□□□□□ -0.4
CLDN11-207ENST00000486975 MOGAT1Q96PD6 335 aa12.56□□□□□ -0.4
CLDN11-207ENST00000486975 OCSTAMPQ9BR26 566 aa12.56□□□□□ -0.4
CLDN11-207ENST00000486975 ZNF426Q9BUY5 554 aa12.56□□□□□ -0.4
CLDN11-207ENST00000486975 REG4Q9BYZ8 158 aa12.56□□□□□ -0.4
CLDN11-207ENST00000486975 GPR35Q9HC97 309 aa12.56□□□□□ -0.4
CLDN11-207ENST00000486975 FGFR1OP2Q9NVK5 253 aa12.56□□□□□ -0.4
CLDN11-207ENST00000486975 GDF2Q9UK05 429 aaPredicted RBP12.56□□□□□ -0.4
CLDN11-207ENST00000486975 NOX1Q9Y5S8 564 aa12.56□□□□□ -0.4
CLDN11-207ENST00000486975 ATP23Q9Y6H3 246 aa12.56□□□□□ -0.4
CLDN11-207ENST00000486975 TRAPPC13A5PLN9 417 aa12.55□□□□□ -0.4
CLDN11-207ENST00000486975 PDE5AO76074 875 aa12.55□□□□□ -0.4
CLDN11-207ENST00000486975 LYPD3O95274 346 aa12.55□□□□□ -0.4
CLDN11-207ENST00000486975 CRYAAP02489 173 aa12.55□□□□□ -0.4
CLDN11-207ENST00000486975 ARFIP2P53365 341 aa12.55□□□□□ -0.4
CLDN11-207ENST00000486975 CRYBA2P53672 197 aa12.55□□□□□ -0.4
CLDN11-207ENST00000486975 DSCR9P59020 149 aa12.55□□□□□ -0.4
CLDN11-207ENST00000486975 ARF1P84077 181 aaKnown RBP12.55□□□□□ -0.4
CLDN11-207ENST00000486975 CHRNB3Q05901 458 aa12.55□□□□□ -0.4
CLDN11-207ENST00000486975 KLF10Q13118 480 aa12.55□□□□□ -0.4
CLDN11-207ENST00000486975 PMS2P3Q13401 168 aa12.55□□□□□ -0.4
CLDN11-207ENST00000486975 MAPRE2Q15555 327 aa12.55□□□□□ -0.4
CLDN11-207ENST00000486975 ENTPD8Q5MY95 495 aa12.55□□□□□ -0.4
CLDN11-207ENST00000486975 CGB2Q6NT52 195 aa12.55□□□□□ -0.4
CLDN11-207ENST00000486975 ZNF627Q7L945 461 aa12.55□□□□□ -0.4
CLDN11-207ENST00000486975 PXKQ7Z7A4 578 aa12.55□□□□□ -0.4
CLDN11-207ENST00000486975 OR4D11Q8NGI4 311 aa12.55□□□□□ -0.4
CLDN11-207ENST00000486975 RNF217Q8TC41 542 aa12.55□□□□□ -0.4
CLDN11-207ENST00000486975 ADAMTS16Q8TE57 1224 aa12.55□□□□□ -0.4
CLDN11-207ENST00000486975 LRRC58Q96CX6 371 aa12.55□□□□□ -0.4
CLDN11-207ENST00000486975 MPP4Q96JB8 637 aa12.55□□□□□ -0.4
CLDN11-207ENST00000486975 SLC19A3Q9BZV2 496 aa12.55□□□□□ -0.4
CLDN11-207ENST00000486975 CCDC134Q9H6E4 229 aa12.55□□□□□ -0.4
CLDN11-207ENST00000486975 CRLF2Q9HC73 371 aa12.55□□□□□ -0.4
CLDN11-207ENST00000486975 SAR1AQ9NR31 198 aa12.55□□□□□ -0.4
CLDN11-207ENST00000486975 ZNF446Q9NWS9 450 aa12.55□□□□□ -0.4
CLDN11-207ENST00000486975 MOKQ9UQ07 419 aa12.55□□□□□ -0.4
CLDN11-207ENST00000486975 ZNF99A8MXY4 864 aaPredicted RBP12.54□□□□□ -0.4
CLDN11-207ENST00000486975 PLPP3O14495 311 aa12.54□□□□□ -0.4
CLDN11-207ENST00000486975 THY1P04216 161 aa12.54□□□□□ -0.4
CLDN11-207ENST00000486975 VIMP08670 466 aaKnown RBP12.54□□□□□ -0.4
CLDN11-207ENST00000486975 CBR1P16152 277 aa12.54□□□□□ -0.4
CLDN11-207ENST00000486975 PTNP21246 168 aa12.54□□□□□ -0.4
CLDN11-207ENST00000486975 CBLP22681 906 aa12.54□□□□□ -0.4
CLDN11-207ENST00000486975 NUDT6P53370 316 aa12.54□□□□□ -0.4
CLDN11-207ENST00000486975 IL1RL1Q01638 556 aa12.54□□□□□ -0.4
CLDN11-207ENST00000486975 NAAAQ02083 359 aa12.54□□□□□ -0.4
CLDN11-207ENST00000486975 POU3F1Q03052 451 aaPredicted RBP12.54□□□□□ -0.4
CLDN11-207ENST00000486975 RAB35Q15286 201 aa12.54□□□□□ -0.4
CLDN11-207ENST00000486975 SWI5Q1ZZU3 235 aa12.54□□□□□ -0.4
CLDN11-207ENST00000486975 CEACAM16Q2WEN9 425 aa12.54□□□□□ -0.4
CLDN11-207ENST00000486975 RABL3Q5HYI8 236 aa12.54□□□□□ -0.4
CLDN11-207ENST00000486975 ERICH5Q6P6B1 374 aa12.54□□□□□ -0.4
CLDN11-207ENST00000486975 C20orf196Q8IYI0 205 aa12.54□□□□□ -0.4
CLDN11-207ENST00000486975 OR5J2Q8NH18 312 aa12.54□□□□□ -0.4
CLDN11-207ENST00000486975 SLC26A7Q8TE54 656 aa12.54□□□□□ -0.4
CLDN11-207ENST00000486975 KCNS3Q9BQ31 491 aa12.54□□□□□ -0.4
CLDN11-207ENST00000486975 A0A096LPE4 126 aa12.53□□□□□ -0.4
CLDN11-207ENST00000486975 A0A1W2PPZ6 126 aa12.53□□□□□ -0.4
CLDN11-207ENST00000486975 SLC35F4A4IF30 521 aa12.53□□□□□ -0.4
CLDN11-207ENST00000486975 CPSF4LA6NMK7 179 aaKnown RBP12.53□□□□□ -0.4
CLDN11-207ENST00000486975 LRRN3E7EW58 273 aa12.53□□□□□ -0.4
CLDN11-207ENST00000486975 MRASO14807 208 aa12.53□□□□□ -0.4
CLDN11-207ENST00000486975 SLC22A2O15244 555 aa12.53□□□□□ -0.4
CLDN11-207ENST00000486975 SSX4O60224 188 aa12.53□□□□□ -0.4
CLDN11-207ENST00000486975 CECR9P0C854 216 aa12.53□□□□□ -0.4
CLDN11-207ENST00000486975 HLA-DOBP13765 273 aa12.53□□□□□ -0.4
CLDN11-207ENST00000486975 ARR3P36575 388 aa12.53□□□□□ -0.4
CLDN11-207ENST00000486975 ZNF74Q16587 644 aa12.53□□□□□ -0.4
CLDN11-207ENST00000486975 MST1LQ2TV78 715 aa12.53□□□□□ -0.4
CLDN11-207ENST00000486975 MMEL1Q495T6 779 aa12.53□□□□□ -0.4
CLDN11-207ENST00000486975 REP15Q6BDI9 236 aa12.53□□□□□ -0.4
CLDN11-207ENST00000486975 TTC33Q6PID6 262 aaPredicted RBP12.53□□□□□ -0.4
CLDN11-207ENST00000486975 WDR88Q6ZMY6 472 aa12.53□□□□□ -0.4
CLDN11-207ENST00000486975 TSPYL5Q86VY4 417 aaPredicted RBP12.53□□□□□ -0.4
CLDN11-207ENST00000486975 SNX32Q86XE0 403 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 162.3 ms