RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 SNX18Q96RF0 628 aa12.26□□□□□ -0.45
VAPB-202ENST00000395802 RHNO1Q9BSD3 238 aa12.26□□□□□ -0.45
VAPB-202ENST00000395802 ENKD1Q9H0I2 346 aa12.26□□□□□ -0.45
VAPB-202ENST00000395802 PLCXD1Q9NUJ7 323 aa12.26□□□□□ -0.45
VAPB-202ENST00000395802 OR14I1A6ND48 311 aa12.25□□□□□ -0.45
VAPB-202ENST00000395802 PRODHO43272 600 aa12.25□□□□□ -0.45
VAPB-202ENST00000395802 AKAP8O43823 692 aaKnown RBP12.25□□□□□ -0.45
VAPB-202ENST00000395802 AHCYL1O43865 530 aa12.25□□□□□ -0.45
VAPB-202ENST00000395802 MRPS14O60783 128 aaKnown RBP12.25□□□□□ -0.45
VAPB-202ENST00000395802 SYNGR4O95473 234 aa12.25□□□□□ -0.45
VAPB-202ENST00000395802 NR2C1P13056 603 aa12.25□□□□□ -0.45
VAPB-202ENST00000395802 STARP49675 285 aa12.25□□□□□ -0.45
VAPB-202ENST00000395802 CLDN15P56746 228 aa12.25□□□□□ -0.45
VAPB-202ENST00000395802 CLDN18P56856 261 aa12.25□□□□□ -0.45
VAPB-202ENST00000395802 HSF1Q00613 529 aa12.25□□□□□ -0.45
VAPB-202ENST00000395802 PMP22Q01453 160 aa12.25□□□□□ -0.45
VAPB-202ENST00000395802 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.25□□□□□ -0.45
VAPB-202ENST00000395802 LGALS3BPQ08380 585 aa12.25□□□□□ -0.45
VAPB-202ENST00000395802 POU4F3Q15319 338 aa12.25□□□□□ -0.45
VAPB-202ENST00000395802 SF3B4Q15427 424 aaKnown RBP eCLIP12.25□□□□□ -0.453e-8■■■□□ 15.6
VAPB-202ENST00000395802 ACKR1Q16570 336 aa12.25□□□□□ -0.45
VAPB-202ENST00000395802 KRTCAP3Q53RY4 240 aa12.25□□□□□ -0.45
VAPB-202ENST00000395802 RNFT1Q5M7Z0 435 aa12.25□□□□□ -0.45
VAPB-202ENST00000395802 GTF2IRD2BQ6EKJ0 949 aa12.25□□□□□ -0.45
VAPB-202ENST00000395802 GTF2IRD2Q86UP8 949 aa12.25□□□□□ -0.45
VAPB-202ENST00000395802 ARIH2OSQ8N7S6 290 aa12.25□□□□□ -0.45
VAPB-202ENST00000395802 ZNF540Q8NDQ6 660 aa12.25□□□□□ -0.45
VAPB-202ENST00000395802 FNDC8Q8TC99 324 aa12.25□□□□□ -0.45
VAPB-202ENST00000395802 ADAD1Q96M93 576 aaKnown RBP12.25□□□□□ -0.45
VAPB-202ENST00000395802 ADAM18Q9Y3Q7 739 aa12.25□□□□□ -0.45
VAPB-202ENST00000395802 TEX13CA0A0J9YWL9 993 aa12.25□□□□□ -0.45
VAPB-202ENST00000395802 SMIM31A0A1B0GVY4 71 aa12.25□□□□□ -0.45
VAPB-202ENST00000395802 SLC22A31A6NKX4 558 aa12.25□□□□□ -0.45
VAPB-202ENST00000395802 PTGES3LE9PB15 166 aa12.25□□□□□ -0.45
VAPB-202ENST00000395802 NPIPA2E9PIF3 369 aa12.25□□□□□ -0.45
VAPB-202ENST00000395802 NPIPA3F8WFD2 350 aa12.25□□□□□ -0.45
VAPB-202ENST00000395802 FAM20BO75063 409 aa12.25□□□□□ -0.45
VAPB-202ENST00000395802 RENP00797 406 aa12.25□□□□□ -0.45
VAPB-202ENST00000395802 HIST1H1CP16403 213 aaKnown RBP12.25□□□□□ -0.45
VAPB-202ENST00000395802 POU3F1Q03052 451 aaPredicted RBP12.25□□□□□ -0.45
VAPB-202ENST00000395802 ITGADQ13349 1161 aa12.25□□□□□ -0.45
VAPB-202ENST00000395802 KRR1Q13601 381 aaKnown RBP12.25□□□□□ -0.45
VAPB-202ENST00000395802 PLEKHN1Q494U1 663 aaPredicted RBP12.25□□□□□ -0.45
VAPB-202ENST00000395802 ARMC4Q5T2S8 1044 aa12.25□□□□□ -0.45
VAPB-202ENST00000395802 CXXC5Q7LFL8 322 aaKnown RBP12.25□□□□□ -0.45
VAPB-202ENST00000395802 SPARTQ8N0X7 666 aa12.25□□□□□ -0.45
VAPB-202ENST00000395802 LSM14AQ8ND56 463 aaKnown RBP12.25□□□□□ -0.45
VAPB-202ENST00000395802 OR4K13Q8NH42 304 aa12.25□□□□□ -0.45
VAPB-202ENST00000395802 MYDGFQ969H8 173 aa12.25□□□□□ -0.45
VAPB-202ENST00000395802 RELTQ969Z4 430 aa12.25□□□□□ -0.45
VAPB-202ENST00000395802 OTULINQ96BN8 352 aa12.25□□□□□ -0.45
VAPB-202ENST00000395802 SIGLEC11Q96RL6 698 aa12.25□□□□□ -0.45
VAPB-202ENST00000395802 RBM38Q9H0Z9 239 aaKnown RBP12.25□□□□□ -0.45
VAPB-202ENST00000395802 CNOT2Q9NZN8 540 aaKnown RBP12.25□□□□□ -0.45
VAPB-202ENST00000395802 SEC14L4Q9UDX3 406 aa12.25□□□□□ -0.45
VAPB-202ENST00000395802 ZNF346Q9UL40 294 aaKnown RBP12.25□□□□□ -0.45
VAPB-202ENST00000395802 GPR52Q9Y2T5 361 aa12.25□□□□□ -0.45
VAPB-202ENST00000395802 CHD8Q9HCK8 2581 aa12.25□□□□□ -0.45
VAPB-202ENST00000395802 MGAQ8IWI9 3026 aa12.24□□□□□ -0.45
VAPB-202ENST00000395802 EFCAB10A6NFE3 127 aa12.24□□□□□ -0.45
VAPB-202ENST00000395802 CLCA1A8K7I4 914 aa12.24□□□□□ -0.45
VAPB-202ENST00000395802 ENTPD6O75354 484 aa12.24□□□□□ -0.45
VAPB-202ENST00000395802 SERPINI2O75830 405 aa12.24□□□□□ -0.45
VAPB-202ENST00000395802 PLGP00747 810 aaPredicted RBP12.24□□□□□ -0.45
VAPB-202ENST00000395802 FREM3P0C091 2139 aa12.24□□□□□ -0.45
VAPB-202ENST00000395802 FAM87AP0C7U9 286 aa12.24□□□□□ -0.45
VAPB-202ENST00000395802 ACVR1BP36896 505 aa12.24□□□□□ -0.45
VAPB-202ENST00000395802 CENPAP49450 140 aa12.24□□□□□ -0.45
VAPB-202ENST00000395802 SUCLG1P53597 346 aaKnown RBP12.24□□□□□ -0.45
VAPB-202ENST00000395802 CDH11P55287 796 aa12.24□□□□□ -0.45
VAPB-202ENST00000395802 SRYQ05066 204 aa12.24□□□□□ -0.45
VAPB-202ENST00000395802 PIGFQ07326 219 aa12.24□□□□□ -0.45
VAPB-202ENST00000395802 C19orf57Q0VDD7 668 aa12.24□□□□□ -0.45
VAPB-202ENST00000395802 KLHL22Q53GT1 634 aa12.24□□□□□ -0.45
VAPB-202ENST00000395802 XAF1Q6GPH4 301 aa12.24□□□□□ -0.45
VAPB-202ENST00000395802 KCTD8Q6ZWB6 473 aa12.24□□□□□ -0.45
VAPB-202ENST00000395802 SLC35D2Q76EJ3 337 aa12.24□□□□□ -0.45
VAPB-202ENST00000395802 CPOQ8IVL8 374 aa12.24□□□□□ -0.45
VAPB-202ENST00000395802 TEX19Q8NA77 164 aa12.24□□□□□ -0.45
VAPB-202ENST00000395802 Q96M85 177 aa12.24□□□□□ -0.45
VAPB-202ENST00000395802 TSPAN32Q96QS1 320 aa12.24□□□□□ -0.45
VAPB-202ENST00000395802 TIMP4Q99727 224 aa12.24□□□□□ -0.45
VAPB-202ENST00000395802 PRORYQ9H606 182 aa12.24□□□□□ -0.45
VAPB-202ENST00000395802 ZNF71Q9NQZ8 489 aaPredicted RBP12.24□□□□□ -0.45
VAPB-202ENST00000395802 PLSCR2Q9NRY7 297 aa12.24□□□□□ -0.45
VAPB-202ENST00000395802 NDUFA13Q9P0J0 144 aa12.24□□□□□ -0.45
VAPB-202ENST00000395802 LHX6Q9UPM6 363 aa12.24□□□□□ -0.45
VAPB-202ENST00000395802 NCKAP5O14513 1909 aa12.23□□□□□ -0.45
VAPB-202ENST00000395802 ZNF726A6NNF4 738 aa12.23□□□□□ -0.45
VAPB-202ENST00000395802 CENPBD1B2RD01 187 aa12.23□□□□□ -0.45
VAPB-202ENST00000395802 KDM4EB2RXH2 506 aaPredicted RBP12.23□□□□□ -0.45
VAPB-202ENST00000395802 ARHGEF9O43307 516 aa12.23□□□□□ -0.45
VAPB-202ENST00000395802 CXCL13O43927 109 aa12.23□□□□□ -0.45
VAPB-202ENST00000395802 FCGR2AP12318 317 aa12.23□□□□□ -0.45
VAPB-202ENST00000395802 IFNGR1P15260 489 aa12.23□□□□□ -0.45
VAPB-202ENST00000395802 P2RY4P51582 365 aa12.23□□□□□ -0.45
VAPB-202ENST00000395802 LINC00303Q3SY05 128 aa12.23□□□□□ -0.45
VAPB-202ENST00000395802 LCN1P1Q5VSP4 162 aa12.23□□□□□ -0.45
VAPB-202ENST00000395802 AADACL4Q5VUY2 407 aa12.23□□□□□ -0.45
VAPB-202ENST00000395802 PLBD1Q6P4A8 553 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 109.4 ms