RNA–Protein interactions for RNA: ENST00000388948.7

LRRK1-201, Transcript of leucine rich repeat kinase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LRRK1, Length 7,671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-201ENST00000388948 USF2Q15853 346 aaPredicted RBP13.72□□□□□ -0.21
LRRK1-201ENST00000388948 ZNF181Q2M3W8 571 aa13.72□□□□□ -0.21
LRRK1-201ENST00000388948 CCSMST1Q4G0I0 132 aa13.72□□□□□ -0.21
LRRK1-201ENST00000388948 HEPHL1Q6MZM0 1159 aa13.72□□□□□ -0.21
LRRK1-201ENST00000388948 OR5M9Q8NGP3 310 aa13.72□□□□□ -0.21
LRRK1-201ENST00000388948 SUN5Q8TC36 379 aa13.72□□□□□ -0.21
LRRK1-201ENST00000388948 KIAA1456Q9P272 454 aa13.72□□□□□ -0.21
LRRK1-201ENST00000388948 UBQLN2Q9UHD9 624 aa13.72□□□□□ -0.21
LRRK1-201ENST00000388948 A0A1B0GWA3 101 aa13.72□□□□□ -0.21
LRRK1-201ENST00000388948 METTL12A8MUP2 240 aa13.72□□□□□ -0.21
LRRK1-201ENST00000388948 SOCS6O14544 535 aa13.72□□□□□ -0.21
LRRK1-201ENST00000388948 ARAFP10398 606 aa13.72□□□□□ -0.21
LRRK1-201ENST00000388948 AKR1C1Q04828 323 aa13.72□□□□□ -0.21
LRRK1-201ENST00000388948 PLA2G7Q13093 441 aa13.72□□□□□ -0.21
LRRK1-201ENST00000388948 TRIP6Q15654 476 aaKnown RBP13.72□□□□□ -0.21
LRRK1-201ENST00000388948 INPP5EQ9NRR6 644 aa13.72□□□□□ -0.21
LRRK1-201ENST00000388948 ZNF281Q9Y2X9 895 aa13.72□□□□□ -0.21
LRRK1-201ENST00000388948 IGHV3-64DA0A0J9YX35 117 aa13.71□□□□□ -0.21
LRRK1-201ENST00000388948 FKBP2P26885 142 aaKnown RBP13.71□□□□□ -0.21
LRRK1-201ENST00000388948 RIPPLY1Q0D2K3 151 aa13.71□□□□□ -0.21
LRRK1-201ENST00000388948 TMEM196Q5HYL7 178 aa13.71□□□□□ -0.21
LRRK1-201ENST00000388948 DPM1O60762 260 aa13.71□□□□□ -0.21
LRRK1-201ENST00000388948 APOBEC1P41238 236 aaKnown RBP13.71□□□□□ -0.21
LRRK1-201ENST00000388948 S100A12P80511 92 aa13.71□□□□□ -0.21
LRRK1-201ENST00000388948 OR8J2Q8NGG1 315 aa13.71□□□□□ -0.21
LRRK1-201ENST00000388948 SHARPINQ9H0F6 387 aa13.71□□□□□ -0.21
LRRK1-201ENST00000388948 ZNF71Q9NQZ8 489 aaPredicted RBP13.71□□□□□ -0.21
LRRK1-201ENST00000388948 PAQR5Q9NXK6 330 aaPredicted RBP13.71□□□□□ -0.21
LRRK1-201ENST00000388948 ABCD4O14678 606 aa13.71□□□□□ -0.21
LRRK1-201ENST00000388948 CDK4P11802 303 aa13.71□□□□□ -0.21
LRRK1-201ENST00000388948 CAPZBP47756 277 aa13.71□□□□□ -0.21
LRRK1-201ENST00000388948 NCS1P62166 190 aa13.71□□□□□ -0.21
LRRK1-201ENST00000388948 LIN7BQ9HAP6 207 aa13.71□□□□□ -0.21
LRRK1-201ENST00000388948 MOKQ9UQ07 419 aa13.71□□□□□ -0.21
LRRK1-201ENST00000388948 MYH14Q7Z406 1995 aaKnown RBP13.71□□□□□ -0.21
LRRK1-201ENST00000388948 TAS2R46P59540 309 aa13.71□□□□□ -0.21
LRRK1-201ENST00000388948 CDONQ4KMG0 1287 aa13.71□□□□□ -0.21
LRRK1-201ENST00000388948 FAM69AQ5T7M9 428 aa13.71□□□□□ -0.21
LRRK1-201ENST00000388948 TMEM43Q9BTV4 400 aa13.71□□□□□ -0.21
LRRK1-201ENST00000388948 OR7A17O14581 309 aa13.71□□□□□ -0.22
LRRK1-201ENST00000388948 MAKP20794 623 aa13.71□□□□□ -0.22
LRRK1-201ENST00000388948 SRP14P37108 136 aaKnown RBP13.71□□□□□ -0.22
LRRK1-201ENST00000388948 OR10X1Q8NGY0 326 aa13.71□□□□□ -0.22
LRRK1-201ENST00000388948 FBXO27Q8NI29 283 aa13.71□□□□□ -0.22
LRRK1-201ENST00000388948 NMNAT3Q96T66 252 aa13.71□□□□□ -0.22
LRRK1-201ENST00000388948 UNKLQ9H9P5 680 aaKnown RBP13.71□□□□□ -0.22
LRRK1-201ENST00000388948 NLKQ9UBE8 527 aa13.71□□□□□ -0.22
LRRK1-201ENST00000388948 LRIT2A6NDA9 550 aa13.71□□□□□ -0.22
LRRK1-201ENST00000388948 GFERP55789 205 aa13.71□□□□□ -0.22
LRRK1-201ENST00000388948 FAM185AQ8N0U4 392 aa13.71□□□□□ -0.22
LRRK1-201ENST00000388948 CHRNA9Q9UGM1 479 aa13.71□□□□□ -0.22
LRRK1-201ENST00000388948 NDRG4Q9ULP0 352 aaKnown RBP13.71□□□□□ -0.22
LRRK1-201ENST00000388948 DEGS1O15121 323 aa13.7□□□□□ -0.22
LRRK1-201ENST00000388948 ZGLP1P0C6A0 271 aa13.7□□□□□ -0.22
LRRK1-201ENST00000388948 IVDP26440 423 aa13.7□□□□□ -0.22
LRRK1-201ENST00000388948 LTBQ06643 244 aa13.7□□□□□ -0.22
LRRK1-201ENST00000388948 NLRC3Q7RTR2 1065 aa13.7□□□□□ -0.22
LRRK1-201ENST00000388948 CPPED1Q9BRF8 314 aaPredicted RBP13.7□□□□□ -0.22
LRRK1-201ENST00000388948 NIPAL2Q9H841 368 aa13.7□□□□□ -0.22
LRRK1-201ENST00000388948 WDR76Q9H967 626 aa13.7□□□□□ -0.22
LRRK1-201ENST00000388948 PIGLQ9Y2B2 252 aa13.7□□□□□ -0.22
LRRK1-201ENST00000388948 PCDHGA5Q9Y5G8 931 aa13.7□□□□□ -0.22
LRRK1-201ENST00000388948 NUP205Q92621 2012 aa13.7□□□□□ -0.22
LRRK1-201ENST00000388948 SGCEO43556 437 aa13.7□□□□□ -0.22
LRRK1-201ENST00000388948 TRHRP34981 398 aaPredicted RBP13.7□□□□□ -0.22
LRRK1-201ENST00000388948 SCN9AQ15858 1988 aa13.7□□□□□ -0.22
LRRK1-201ENST00000388948 TMEM212A6NML5 194 aa13.7□□□□□ -0.22
LRRK1-201ENST00000388948 PIAS2O75928 621 aa13.7□□□□□ -0.22
LRRK1-201ENST00000388948 OR2J2O76002 312 aa13.7□□□□□ -0.22
LRRK1-201ENST00000388948 ZIC2O95409 532 aaPredicted RBP13.7□□□□□ -0.22
LRRK1-201ENST00000388948 MT-CO3P00414 261 aa13.7□□□□□ -0.22
LRRK1-201ENST00000388948 NPPBP16860 134 aa13.7□□□□□ -0.22
LRRK1-201ENST00000388948 PM20D2Q8IYS1 436 aa13.7□□□□□ -0.22
LRRK1-201ENST00000388948 ZNF454Q8N9F8 522 aa13.7□□□□□ -0.22
LRRK1-201ENST00000388948 RNF170Q96K19 258 aa13.7□□□□□ -0.22
LRRK1-201ENST00000388948 EMC6Q9BV81 110 aa13.7□□□□□ -0.22
LRRK1-201ENST00000388948 HRH3Q9Y5N1 445 aa13.7□□□□□ -0.22
LRRK1-201ENST00000388948 ANKRD36CQ5JPF3 1778 aa13.7□□□□□ -0.22
LRRK1-201ENST00000388948 RAB4AP20338 218 aa13.7□□□□□ -0.22
LRRK1-201ENST00000388948 HLCSP50747 726 aa13.7□□□□□ -0.22
LRRK1-201ENST00000388948 TSPAN31Q12999 210 aa13.7□□□□□ -0.22
LRRK1-201ENST00000388948 C1orf87Q8N0U7 546 aa13.7□□□□□ -0.22
LRRK1-201ENST00000388948 OR11G2Q8NGC1 345 aa13.7□□□□□ -0.22
LRRK1-201ENST00000388948 FUNDC2Q9BWH2 189 aa13.7□□□□□ -0.22
LRRK1-201ENST00000388948 A0A096LPE4 126 aa13.7□□□□□ -0.22
LRRK1-201ENST00000388948 A0A1W2PPZ6 126 aa13.7□□□□□ -0.22
LRRK1-201ENST00000388948 CLDN6P56747 220 aa13.7□□□□□ -0.22
LRRK1-201ENST00000388948 CLN3Q13286 438 aa13.7□□□□□ -0.22
LRRK1-201ENST00000388948 ZNF583Q96ND8 569 aa13.7□□□□□ -0.22
LRRK1-201ENST00000388948 TSNAXQ99598 290 aaKnown RBP13.7□□□□□ -0.22
LRRK1-201ENST00000388948 SSUH2Q9Y2M2 353 aa13.7□□□□□ -0.22
LRRK1-201ENST00000388948 FAM90A27PA6NNH2 459 aa13.7□□□□□ -0.22
LRRK1-201ENST00000388948 YIF1AO95070 293 aa13.7□□□□□ -0.22
LRRK1-201ENST00000388948 BLVRBP30043 206 aaPredicted RBP13.7□□□□□ -0.22
LRRK1-201ENST00000388948 CDK5R2Q13319 367 aa13.7□□□□□ -0.22
LRRK1-201ENST00000388948 OR56B1Q8NGI3 324 aa13.7□□□□□ -0.22
LRRK1-201ENST00000388948 SLC7A13Q8TCU3 470 aa13.7□□□□□ -0.22
LRRK1-201ENST00000388948 ELP4Q96EB1 424 aa13.7□□□□□ -0.22
LRRK1-201ENST00000388948 MALSU1Q96EH3 234 aa13.7□□□□□ -0.22
LRRK1-201ENST00000388948 TRBV4-1A0A0J9YWV2 114 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms