RNA–Protein interactions for RNA: ENST00000340647.8

BRCC3-202, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS P2 TSL 2 BASIC

Gene BRCC3, Length 1,101 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-202ENST00000340647 LRRC17Q8N6Y2 441 aa14.82□□□□□ -0.04
BRCC3-202ENST00000340647 VANGL1Q8TAA9 524 aaPredicted RBP14.82□□□□□ -0.04
BRCC3-202ENST00000340647 ALG2Q9H553 416 aa14.82□□□□□ -0.04
BRCC3-202ENST00000340647 CCDC134Q9H6E4 229 aa14.82□□□□□ -0.04
BRCC3-202ENST00000340647 EVA1AQ9H8M9 152 aa14.82□□□□□ -0.04
BRCC3-202ENST00000340647 CRLF2Q9HC73 371 aa14.82□□□□□ -0.04
BRCC3-202ENST00000340647 MEPEQ9NQ76 525 aaPredicted RBP14.82□□□□□ -0.04
BRCC3-202ENST00000340647 FAIMQ9NVQ4 179 aa14.82□□□□□ -0.04
BRCC3-202ENST00000340647 B3GNT2Q9NY97 397 aa14.82□□□□□ -0.04
BRCC3-202ENST00000340647 TAS2R5Q9NYW4 299 aa14.82□□□□□ -0.04
BRCC3-202ENST00000340647 ZNF224Q9NZL3 707 aa14.82□□□□□ -0.04
BRCC3-202ENST00000340647 POU2F3Q9UKI9 436 aa14.82□□□□□ -0.04
BRCC3-202ENST00000340647 ADAM21Q9UKJ8 722 aa14.82□□□□□ -0.04
BRCC3-202ENST00000340647 CORINQ9Y5Q5 1042 aa14.82□□□□□ -0.04
BRCC3-202ENST00000340647 SLC35F4A4IF30 521 aa14.81□□□□□ -0.04
BRCC3-202ENST00000340647 H7C417 338 aa14.81□□□□□ -0.04
BRCC3-202ENST00000340647 SSX4O60224 188 aa14.81□□□□□ -0.04
BRCC3-202ENST00000340647 SLC43A1O75387 559 aa14.81□□□□□ -0.04
BRCC3-202ENST00000340647 KRT33AO76009 404 aa14.81□□□□□ -0.04
BRCC3-202ENST00000340647 LY6HO94772 140 aa14.81□□□□□ -0.04
BRCC3-202ENST00000340647 WNT11O96014 354 aa14.81□□□□□ -0.04
BRCC3-202ENST00000340647 GTF2E2P29084 291 aaKnown RBP14.81□□□□□ -0.04
BRCC3-202ENST00000340647 PCSK6P29122 969 aa14.81□□□□□ -0.04
BRCC3-202ENST00000340647 APOBEC3AP31941 199 aaPredicted RBP14.81□□□□□ -0.04
BRCC3-202ENST00000340647 ARFIP2P53365 341 aa14.81□□□□□ -0.04
BRCC3-202ENST00000340647 NCALDP61601 193 aa14.81□□□□□ -0.04
BRCC3-202ENST00000340647 NAAAQ02083 359 aa14.81□□□□□ -0.04
BRCC3-202ENST00000340647 ZNF74Q16587 644 aa14.81□□□□□ -0.04
BRCC3-202ENST00000340647 COQ5Q5HYK3 327 aa14.81□□□□□ -0.04
BRCC3-202ENST00000340647 HMBOX1Q6NT76 420 aa14.81□□□□□ -0.04
BRCC3-202ENST00000340647 PATL1Q86TB9 770 aaKnown RBP14.81□□□□□ -0.04
BRCC3-202ENST00000340647 FBXL14Q8N1E6 418 aa14.81□□□□□ -0.04
BRCC3-202ENST00000340647 FAM169BQ8N8A8 192 aa14.81□□□□□ -0.04
BRCC3-202ENST00000340647 RNF217Q8TC41 542 aa14.81□□□□□ -0.04
BRCC3-202ENST00000340647 C10orf82Q8WW14 230 aa14.81□□□□□ -0.04
BRCC3-202ENST00000340647 NANOS1Q8WY41 292 aaKnown RBP14.81□□□□□ -0.04
BRCC3-202ENST00000340647 ZNF317Q96PQ6 595 aaPredicted RBP14.81□□□□□ -0.04
BRCC3-202ENST00000340647 MALRD1Q5VYJ5 2156 aa14.81□□□□□ -0.04
BRCC3-202ENST00000340647 GPRIN2O60269 458 aa14.8□□□□□ -0.04
BRCC3-202ENST00000340647 IGFBP1P08833 259 aaPredicted RBP14.8□□□□□ -0.04
BRCC3-202ENST00000340647 SH3BGRP55822 239 aaPredicted RBP14.8□□□□□ -0.04
BRCC3-202ENST00000340647 POU3F1Q03052 451 aaPredicted RBP14.8□□□□□ -0.04
BRCC3-202ENST00000340647 PUDPQ08623 228 aa14.8□□□□□ -0.04
BRCC3-202ENST00000340647 C1DQ13901 141 aaKnown RBP14.8□□□□□ -0.04
BRCC3-202ENST00000340647 MFSD13AQ14CX5 517 aa14.8□□□□□ -0.04
BRCC3-202ENST00000340647 C3orf36Q3SXR2 165 aa14.8□□□□□ -0.04
BRCC3-202ENST00000340647 CARD17Q5XLA6 110 aa14.8□□□□□ -0.04
BRCC3-202ENST00000340647 ZNF627Q7L945 461 aa14.8□□□□□ -0.04
BRCC3-202ENST00000340647 SLC46A3Q7Z3Q1 461 aa14.8□□□□□ -0.04
BRCC3-202ENST00000340647 PXKQ7Z7A4 578 aa14.8□□□□□ -0.04
BRCC3-202ENST00000340647 SNX32Q86XE0 403 aa14.8□□□□□ -0.04
BRCC3-202ENST00000340647 UEVLDQ8IX04 471 aa14.8□□□□□ -0.04
BRCC3-202ENST00000340647 OR8J3Q8NGG0 315 aa14.8□□□□□ -0.04
BRCC3-202ENST00000340647 EPYCQ99645 322 aa14.8□□□□□ -0.04
BRCC3-202ENST00000340647 KATNB1Q9BVA0 655 aa14.8□□□□□ -0.04
BRCC3-202ENST00000340647 FKRPQ9H9S5 495 aa14.8□□□□□ -0.04
BRCC3-202ENST00000340647 SLC13A4Q9UKG4 626 aa14.8□□□□□ -0.04
BRCC3-202ENST00000340647 SLC7A7Q9UM01 511 aa14.8□□□□□ -0.04
BRCC3-202ENST00000340647 COL6A5A8TX70 2615 aa14.8□□□□□ -0.04
BRCC3-202ENST00000340647 LOC100653049A0A140TA62 436 aa14.79□□□□□ -0.04
BRCC3-202ENST00000340647 TRAPPC13A5PLN9 417 aa14.79□□□□□ -0.04
BRCC3-202ENST00000340647 ZNF99A8MXY4 864 aaPredicted RBP14.79□□□□□ -0.04
BRCC3-202ENST00000340647 M0R3G1 203 aa14.79□□□□□ -0.04
BRCC3-202ENST00000340647 MRASO14807 208 aa14.79□□□□□ -0.04
BRCC3-202ENST00000340647 SHOX2O60902 331 aaPredicted RBP14.79□□□□□ -0.04
BRCC3-202ENST00000340647 KRT34O76011 436 aa14.79□□□□□ -0.04
BRCC3-202ENST00000340647 CH25HO95992 272 aa14.79□□□□□ -0.04
BRCC3-202ENST00000340647 ASAH2BP0C7U1 165 aa14.79□□□□□ -0.04
BRCC3-202ENST00000340647 HOXB1P14653 301 aaPredicted RBP14.79□□□□□ -0.04
BRCC3-202ENST00000340647 NQO1P15559 274 aaKnown RBP14.79□□□□□ -0.04
BRCC3-202ENST00000340647 CBR1P16152 277 aa14.79□□□□□ -0.04
BRCC3-202ENST00000340647 PMS2P3Q13401 168 aa14.79□□□□□ -0.04
BRCC3-202ENST00000340647 CAMK2DQ13557 499 aa14.79□□□□□ -0.04
BRCC3-202ENST00000340647 CYLC2Q14093 348 aaPredicted RBP14.79□□□□□ -0.04
BRCC3-202ENST00000340647 ADIPOQQ15848 244 aa14.79□□□□□ -0.04
BRCC3-202ENST00000340647 MSMPQ1L6U9 139 aa14.79□□□□□ -0.04
BRCC3-202ENST00000340647 KLHL24Q6TFL4 600 aa14.79□□□□□ -0.04
BRCC3-202ENST00000340647 NKAIN4Q8IVV8 208 aa14.79□□□□□ -0.04
BRCC3-202ENST00000340647 SLC30A8Q8IWU4 369 aa14.79□□□□□ -0.04
BRCC3-202ENST00000340647 GPR137CQ8N3F9 429 aa14.79□□□□□ -0.04
BRCC3-202ENST00000340647 ZNF525Q8N782 197 aa14.79□□□□□ -0.04
BRCC3-202ENST00000340647 PIK3C3Q8NEB9 887 aa14.79□□□□□ -0.04
BRCC3-202ENST00000340647 OR5J2Q8NH18 312 aa14.79□□□□□ -0.04
BRCC3-202ENST00000340647 LRR1Q96L50 414 aa14.79□□□□□ -0.04
BRCC3-202ENST00000340647 HS6ST2Q96MM7 605 aa14.79□□□□□ -0.04
BRCC3-202ENST00000340647 ARMCX1Q9P291 453 aa14.79□□□□□ -0.04
BRCC3-202ENST00000340647 TMEM129A0AVI4 362 aa14.78□□□□□ -0.04
BRCC3-202ENST00000340647 MT-ATP6P00846 226 aa14.78□□□□□ -0.04
BRCC3-202ENST00000340647 TROVE2P10155 538 aaKnown RBP eCLIP14.78□□□□□ -0.04
BRCC3-202ENST00000340647 UBE2NP61088 152 aaKnown RBP14.78□□□□□ -0.04
BRCC3-202ENST00000340647 LSM11P83369 360 aaKnown RBP eCLIP14.78□□□□□ -0.04
BRCC3-202ENST00000340647 ZP4Q12836 540 aa14.78□□□□□ -0.04
BRCC3-202ENST00000340647 MDP1Q86V88 176 aa14.78□□□□□ -0.04
BRCC3-202ENST00000340647 CARM1Q86X55 608 aa14.78□□□□□ -0.04
BRCC3-202ENST00000340647 DEPDC4Q8N2C3 294 aa14.78□□□□□ -0.04
BRCC3-202ENST00000340647 FGFBP3Q8TAT2 258 aa14.78□□□□□ -0.04
BRCC3-202ENST00000340647 FBXO17Q96EF6 278 aa14.78□□□□□ -0.04
BRCC3-202ENST00000340647 SORCS2Q96PQ0 1159 aa14.78□□□□□ -0.04
BRCC3-202ENST00000340647 ASPNQ9BXN1 380 aa14.78□□□□□ -0.04
BRCC3-202ENST00000340647 BARX1Q9HBU1 254 aaPredicted RBP14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms