RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 AHCYP23526 432 aa12.51□□□□□ -0.41
VPS25-201ENST00000253794 OR3A2P47893 321 aa12.51□□□□□ -0.41
VPS25-201ENST00000253794 DAPP51397 102 aa12.51□□□□□ -0.41
VPS25-201ENST00000253794 DAP3P51398 398 aaKnown RBP12.51□□□□□ -0.41
VPS25-201ENST00000253794 SRSF1Q07955 248 aaKnown RBP eCLIP12.51□□□□□ -0.41
VPS25-201ENST00000253794 C1DQ13901 141 aaKnown RBP12.51□□□□□ -0.41
VPS25-201ENST00000253794 SLC25A35Q3KQZ1 300 aa12.51□□□□□ -0.41
VPS25-201ENST00000253794 FBXL19-AS1Q494R0 122 aa12.51□□□□□ -0.41
VPS25-201ENST00000253794 VWA1Q6PCB0 445 aa12.51□□□□□ -0.41
VPS25-201ENST00000253794 XKRXQ6PP77 449 aa12.51□□□□□ -0.41
VPS25-201ENST00000253794 KLHL17Q6TDP4 642 aa12.51□□□□□ -0.41
VPS25-201ENST00000253794 THSD4Q6ZMP0 1018 aa12.51□□□□□ -0.41
VPS25-201ENST00000253794 DPY19L2P2Q6ZN68 376 aa12.51□□□□□ -0.41
VPS25-201ENST00000253794 FAM122BQ7Z309 247 aa12.51□□□□□ -0.41
VPS25-201ENST00000253794 NUFIP2Q7Z417 695 aaKnown RBP12.51□□□□□ -0.41
VPS25-201ENST00000253794 HDDC2Q7Z4H3 204 aa12.51□□□□□ -0.41
VPS25-201ENST00000253794 STK32CQ86UX6 486 aa12.51□□□□□ -0.41
VPS25-201ENST00000253794 KIF18BQ86Y91 864 aa12.51□□□□□ -0.41
VPS25-201ENST00000253794 CCDC71Q8IV32 467 aaPredicted RBP12.51□□□□□ -0.41
VPS25-201ENST00000253794 TMEM123Q8N131 208 aa12.51□□□□□ -0.41
VPS25-201ENST00000253794 ZNF808Q8N4W9 903 aaPredicted RBP12.51□□□□□ -0.41
VPS25-201ENST00000253794 ATG16L2Q8NAA4 619 aa12.51□□□□□ -0.41
VPS25-201ENST00000253794 OR6X1Q8NH79 312 aa12.51□□□□□ -0.41
VPS25-201ENST00000253794 LILRB4Q8NHJ6 448 aa12.51□□□□□ -0.41
VPS25-201ENST00000253794 FANK1Q8TC84 345 aa12.51□□□□□ -0.41
VPS25-201ENST00000253794 GTPBP3Q969Y2 492 aaKnown RBP12.51□□□□□ -0.41
VPS25-201ENST00000253794 UCK2Q9BZX2 261 aa12.51□□□□□ -0.41
VPS25-201ENST00000253794 TXNIPQ9H3M7 391 aa12.51□□□□□ -0.41
VPS25-201ENST00000253794 ZNF556Q9HAH1 456 aa12.51□□□□□ -0.41
VPS25-201ENST00000253794 NRIP3Q9NQ35 241 aa12.51□□□□□ -0.41
VPS25-201ENST00000253794 COQ3Q9NZJ6 369 aa12.51□□□□□ -0.41
VPS25-201ENST00000253794 TMEFF2Q9UIK5 374 aaPredicted RBP12.51□□□□□ -0.41
VPS25-201ENST00000253794 POFUT2Q9Y2G5 429 aa12.51□□□□□ -0.41
VPS25-201ENST00000253794 NOSIPQ9Y314 301 aaKnown RBP12.51□□□□□ -0.41
VPS25-201ENST00000253794 TENM4Q6N022 2769 aa12.51□□□□□ -0.41
VPS25-201ENST00000253794 A0A1W2PRG6 482 aa12.5□□□□□ -0.41
VPS25-201ENST00000253794 SAC3D1A6NKF1 404 aa12.5□□□□□ -0.41
VPS25-201ENST00000253794 MCIDASD6RGH6 385 aa12.5□□□□□ -0.41
VPS25-201ENST00000253794 C11orf98E9PRG8 122 aa12.5□□□□□ -0.41
VPS25-201ENST00000253794 H0YHG0 523 aa12.5□□□□□ -0.41
VPS25-201ENST00000253794 IMPA2O14732 288 aa12.5□□□□□ -0.41
VPS25-201ENST00000253794 CASQ2O14958 399 aaPredicted RBP12.5□□□□□ -0.41
VPS25-201ENST00000253794 ARPC3O15145 178 aa12.5□□□□□ -0.41
VPS25-201ENST00000253794 MRPL33O75394 65 aaKnown RBP12.5□□□□□ -0.41
VPS25-201ENST00000253794 ALPLP05186 524 aa12.5□□□□□ -0.41
VPS25-201ENST00000253794 POU2F1P14859 743 aa12.5□□□□□ -0.41
VPS25-201ENST00000253794 SLC6A6P31641 620 aa12.5□□□□□ -0.41
VPS25-201ENST00000253794 ACKR1Q16570 336 aa12.5□□□□□ -0.41
VPS25-201ENST00000253794 ARMC4Q5T2S8 1044 aa12.5□□□□□ -0.41
VPS25-201ENST00000253794 FAM205BPQ63HN1 556 aa12.5□□□□□ -0.41
VPS25-201ENST00000253794 TFAP2EQ6VUC0 442 aa12.5□□□□□ -0.41
VPS25-201ENST00000253794 SLC35D2Q76EJ3 337 aa12.5□□□□□ -0.41
VPS25-201ENST00000253794 BTLAQ7Z6A9 289 aa12.5□□□□□ -0.41
VPS25-201ENST00000253794 MRGPRGQ86SM5 289 aa12.5□□□□□ -0.41
VPS25-201ENST00000253794 LIX1LQ8IVB5 337 aa12.5□□□□□ -0.41
VPS25-201ENST00000253794 CNEP1R1Q8N9A8 125 aa12.5□□□□□ -0.41
VPS25-201ENST00000253794 RELL2Q8NC24 303 aaPredicted RBP12.5□□□□□ -0.41
VPS25-201ENST00000253794 ICA1LQ8NDH6 482 aa12.5□□□□□ -0.41
VPS25-201ENST00000253794 ZNF519Q8TB69 540 aa12.5□□□□□ -0.41
VPS25-201ENST00000253794 ITLN2Q8WWU7 325 aaPredicted RBP12.5□□□□□ -0.41
VPS25-201ENST00000253794 SDCCAG3Q96C92 435 aa12.5□□□□□ -0.41
VPS25-201ENST00000253794 LRR1Q96L50 414 aa12.5□□□□□ -0.41
VPS25-201ENST00000253794 RBM4BQ9BQ04 359 aaKnown RBP12.5□□□□□ -0.41
VPS25-201ENST00000253794 C9orf16Q9BUW7 83 aa12.5□□□□□ -0.41
VPS25-201ENST00000253794 RBM4Q9BWF3 364 aaKnown RBP12.5□□□□□ -0.41
VPS25-201ENST00000253794 LINC00470Q9BZP3 86 aa12.5□□□□□ -0.41
VPS25-201ENST00000253794 ENKD1Q9H0I2 346 aa12.5□□□□□ -0.41
VPS25-201ENST00000253794 RNPEPL1Q9HAU8 725 aa12.5□□□□□ -0.41
VPS25-201ENST00000253794 MALT1Q9UDY8 824 aa12.5□□□□□ -0.41
VPS25-201ENST00000253794 FOXD3Q9UJU5 478 aaPredicted RBP12.5□□□□□ -0.41
VPS25-201ENST00000253794 RRP15Q9Y3B9 282 aaKnown RBP12.5□□□□□ -0.41
VPS25-201ENST00000253794 LRRK2Q5S007 2527 aa12.5□□□□□ -0.41
VPS25-201ENST00000253794 INTS1Q8N201 2190 aaKnown RBP12.49□□□□□ -0.41
VPS25-201ENST00000253794 MYO7BQ6PIF6 2116 aa12.49□□□□□ -0.41
VPS25-201ENST00000253794 BHLHE40O14503 412 aa12.49□□□□□ -0.41
VPS25-201ENST00000253794 IDH3BO43837 385 aa12.49□□□□□ -0.41
VPS25-201ENST00000253794 ZG16O60844 167 aa12.49□□□□□ -0.41
VPS25-201ENST00000253794 BAG2O95816 211 aa12.49□□□□□ -0.41
VPS25-201ENST00000253794 F13BP05160 661 aa12.49□□□□□ -0.41
VPS25-201ENST00000253794 OSMP13725 252 aa12.49□□□□□ -0.41
VPS25-201ENST00000253794 IFNGR1P15260 489 aa12.49□□□□□ -0.41
VPS25-201ENST00000253794 ALDH3A2P51648 485 aa12.49□□□□□ -0.41
VPS25-201ENST00000253794 CLDN17P56750 224 aa12.49□□□□□ -0.41
VPS25-201ENST00000253794 CTXN1P60606 82 aa12.49□□□□□ -0.41
VPS25-201ENST00000253794 RPL27P61353 136 aaKnown RBP12.49□□□□□ -0.41
VPS25-201ENST00000253794 ESRRGP62508 458 aa12.49□□□□□ -0.41
VPS25-201ENST00000253794 SIRPAP78324 504 aa12.49□□□□□ -0.41
VPS25-201ENST00000253794 DAG1Q14118 895 aa12.49□□□□□ -0.41
VPS25-201ENST00000253794 GPR139Q6DWJ6 353 aa12.49□□□□□ -0.41
VPS25-201ENST00000253794 AAED1Q7RTV5 226 aa12.49□□□□□ -0.41
VPS25-201ENST00000253794 FAM26EQ8N5C1 309 aa12.49□□□□□ -0.41
VPS25-201ENST00000253794 OR8D4Q8NGM9 314 aa12.49□□□□□ -0.41
VPS25-201ENST00000253794 ASB10Q8WXI3 467 aa12.49□□□□□ -0.41
VPS25-201ENST00000253794 APH1AQ96BI3 265 aa12.49□□□□□ -0.41
VPS25-201ENST00000253794 TSPAN32Q96QS1 320 aa12.49□□□□□ -0.41
VPS25-201ENST00000253794 OR2M2Q96R28 347 aa12.49□□□□□ -0.41
VPS25-201ENST00000253794 CIB1Q99828 191 aa12.49□□□□□ -0.41
VPS25-201ENST00000253794 KATNB1Q9BVA0 655 aa12.49□□□□□ -0.41
VPS25-201ENST00000253794 MRPL13Q9BYD1 178 aaKnown RBP12.49□□□□□ -0.41
VPS25-201ENST00000253794 PLA2G12AQ9BZM1 189 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms