RNA–Protein interactions for RNA: ENST00000606782.1

CTSA-213, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 582 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-213ENST00000606782 TMED7-TICAM2A0A0A6YYA0 188 aa11.76□□□□□ -0.53
CTSA-213ENST00000606782 TCRBV3S1A0A5B6 114 aa11.76□□□□□ -0.53
CTSA-213ENST00000606782 TRIM64A6NGJ6 449 aa11.76□□□□□ -0.53
CTSA-213ENST00000606782 TRIM64BA6NI03 449 aa11.76□□□□□ -0.53
CTSA-213ENST00000606782 OR5H1A6NKK0 313 aa11.76□□□□□ -0.53
CTSA-213ENST00000606782 PDLIM1O00151 329 aa11.76□□□□□ -0.53
CTSA-213ENST00000606782 EIF1BO60739 113 aaKnown RBP11.76□□□□□ -0.53
CTSA-213ENST00000606782 LYZL6O75951 148 aa11.76□□□□□ -0.53
CTSA-213ENST00000606782 LYPD3O95274 346 aa11.76□□□□□ -0.53
CTSA-213ENST00000606782 THY1P04216 161 aa11.76□□□□□ -0.53
CTSA-213ENST00000606782 SOD3P08294 240 aa11.76□□□□□ -0.53
CTSA-213ENST00000606782 NQO1P15559 274 aaKnown RBP11.76□□□□□ -0.53
CTSA-213ENST00000606782 POLR2HP52434 150 aaKnown RBP11.76□□□□□ -0.53
CTSA-213ENST00000606782 ATP5J2P56134 94 aa11.76□□□□□ -0.53
CTSA-213ENST00000606782 RPS4XP62701 263 aaKnown RBP11.76□□□□□ -0.53
CTSA-213ENST00000606782 BSPH1Q075Z2 132 aa11.76□□□□□ -0.53
CTSA-213ENST00000606782 PPA1Q15181 289 aa11.76□□□□□ -0.53
CTSA-213ENST00000606782 ENTPD8Q5MY95 495 aa11.76□□□□□ -0.53
CTSA-213ENST00000606782 ZNF613Q6PF04 617 aa11.76□□□□□ -0.53
CTSA-213ENST00000606782 ULK3Q6PHR2 472 aa11.76□□□□□ -0.53
CTSA-213ENST00000606782 LINC00114Q6XXX2 140 aa11.76□□□□□ -0.53
CTSA-213ENST00000606782 Q71RC1 249 aaPredicted RBP11.76□□□□□ -0.53
CTSA-213ENST00000606782 PIWIL3Q7Z3Z3 882 aaKnown RBP11.76□□□□□ -0.53
CTSA-213ENST00000606782 ATG4DQ86TL0 474 aaPredicted RBP11.76□□□□□ -0.53
CTSA-213ENST00000606782 TSPYL5Q86VY4 417 aaPredicted RBP11.76□□□□□ -0.53
CTSA-213ENST00000606782 ZNF100Q8IYN0 542 aa11.76□□□□□ -0.53
CTSA-213ENST00000606782 VANGL1Q8TAA9 524 aaPredicted RBP11.76□□□□□ -0.53
CTSA-213ENST00000606782 DNAJA4Q8WW22 397 aaPredicted RBP11.76□□□□□ -0.53
CTSA-213ENST00000606782 C3orf49Q96BT1 292 aa11.76□□□□□ -0.53
CTSA-213ENST00000606782 MUCL1Q96DR8 90 aa11.76□□□□□ -0.53
CTSA-213ENST00000606782 TRIM15Q9C019 465 aa11.76□□□□□ -0.53
CTSA-213ENST00000606782 OR11A1Q9GZK7 315 aa11.76□□□□□ -0.53
CTSA-213ENST00000606782 POLR2J2Q9GZM3 115 aaKnown RBP11.76□□□□□ -0.53
CTSA-213ENST00000606782 POLR2J3Q9H1A7 115 aaKnown RBP11.76□□□□□ -0.53
CTSA-213ENST00000606782 C12orf10Q9HB07 376 aa11.76□□□□□ -0.53
CTSA-213ENST00000606782 IL1RAPQ9NPH3 570 aa11.76□□□□□ -0.53
CTSA-213ENST00000606782 NDUFAF4Q9P032 175 aa11.76□□□□□ -0.53
CTSA-213ENST00000606782 MALT1Q9UDY8 824 aa11.76□□□□□ -0.53
CTSA-213ENST00000606782 LAMP3Q9UQV4 416 aa11.76□□□□□ -0.53
CTSA-213ENST00000606782 TMED7Q9Y3B3 224 aa11.76□□□□□ -0.53
CTSA-213ENST00000606782 A0A0B4J2E0 115 aa11.75□□□□□ -0.53
CTSA-213ENST00000606782 A0A1B0GWA3 101 aa11.75□□□□□ -0.53
CTSA-213ENST00000606782 A0A1B0GX12 115 aa11.75□□□□□ -0.53
CTSA-213ENST00000606782 TMEM72A0PK05 275 aa11.75□□□□□ -0.53
CTSA-213ENST00000606782 FFAR1O14842 300 aa11.75□□□□□ -0.53
CTSA-213ENST00000606782 RAMP1O60894 148 aa11.75□□□□□ -0.53
CTSA-213ENST00000606782 IFNW1P05000 195 aa11.75□□□□□ -0.53
CTSA-213ENST00000606782 IMPDH2P12268 514 aa11.75□□□□□ -0.53
CTSA-213ENST00000606782 TACR3P29371 465 aa11.75□□□□□ -0.53
CTSA-213ENST00000606782 SLC35A1P78382 337 aa11.75□□□□□ -0.53
CTSA-213ENST00000606782 ETFDHQ16134 617 aa11.75□□□□□ -0.53
CTSA-213ENST00000606782 PGGHGQ32M88 737 aa11.75□□□□□ -0.53
CTSA-213ENST00000606782 C1QTNF12Q5T7M4 302 aa11.75□□□□□ -0.53
CTSA-213ENST00000606782 CCDC103Q8IW40 242 aa11.75□□□□□ -0.53
CTSA-213ENST00000606782 ADGRG5Q8IZF4 528 aa11.75□□□□□ -0.53
CTSA-213ENST00000606782 CADM2Q8N3J6 435 aa11.75□□□□□ -0.53
CTSA-213ENST00000606782 SMAP2Q8WU79 429 aaPredicted RBP11.75□□□□□ -0.53
CTSA-213ENST00000606782 SLC38A4Q969I6 547 aa11.75□□□□□ -0.53
CTSA-213ENST00000606782 APH1AQ96BI3 265 aa11.75□□□□□ -0.53
CTSA-213ENST00000606782 DDIT4LQ96D03 193 aa11.75□□□□□ -0.53
CTSA-213ENST00000606782 MUS81Q96NY9 551 aa11.75□□□□□ -0.53
CTSA-213ENST00000606782 SEPHS2Q99611 448 aa11.75□□□□□ -0.53
CTSA-213ENST00000606782 MAGIXQ9H6Y5 334 aa11.75□□□□□ -0.53
CTSA-213ENST00000606782 NPAP1Q9NZP6 1156 aa11.75□□□□□ -0.53
CTSA-213ENST00000606782 RIMS3Q9UJD0 308 aa11.75□□□□□ -0.53
CTSA-213ENST00000606782 A4GNTQ9UNA3 340 aa11.75□□□□□ -0.53
CTSA-213ENST00000606782 NOSIPQ9Y314 301 aaKnown RBP11.75□□□□□ -0.53
CTSA-213ENST00000606782 ENPP4Q9Y6X5 453 aa11.75□□□□□ -0.53
CTSA-213ENST00000606782 SONP18583 2426 aaKnown RBP11.75□□□□□ -0.53
CTSA-213ENST00000606782 ALPK2Q86TB3 2170 aa11.74□□□□□ -0.53
CTSA-213ENST00000606782 TRAPPC13A5PLN9 417 aa11.74□□□□□ -0.53
CTSA-213ENST00000606782 SHISA9B4DS77 424 aa11.74□□□□□ -0.53
CTSA-213ENST00000606782 CLOCKO15516 846 aa11.74□□□□□ -0.53
CTSA-213ENST00000606782 CIB2O75838 187 aa11.74□□□□□ -0.53
CTSA-213ENST00000606782 PRSS23O95084 383 aa11.74□□□□□ -0.53
CTSA-213ENST00000606782 OR5F1O95221 314 aa11.74□□□□□ -0.53
CTSA-213ENST00000606782 GPIP06744 558 aa11.74□□□□□ -0.53
CTSA-213ENST00000606782 THRBP10828 461 aa11.74□□□□□ -0.53
CTSA-213ENST00000606782 HOXB6P17509 224 aaKnown RBP11.74□□□□□ -0.53
CTSA-213ENST00000606782 RHCEP18577 417 aa11.74□□□□□ -0.53
CTSA-213ENST00000606782 MAGEA2P43356 314 aa11.74□□□□□ -0.53
CTSA-213ENST00000606782 CDH12P55289 794 aa11.74□□□□□ -0.53
CTSA-213ENST00000606782 OR2B6P58173 313 aa11.74□□□□□ -0.53
CTSA-213ENST00000606782 VLDLRP98155 873 aa11.74□□□□□ -0.53
CTSA-213ENST00000606782 CHRNB3Q05901 458 aa11.74□□□□□ -0.53
CTSA-213ENST00000606782 PIN1Q13526 163 aaPredicted RBP11.74□□□□□ -0.53
CTSA-213ENST00000606782 CCNIQ14094 377 aa11.74□□□□□ -0.53
CTSA-213ENST00000606782 SLC17A1Q14916 467 aa11.74□□□□□ -0.53
CTSA-213ENST00000606782 C1orf146Q5VVC0 180 aa11.74□□□□□ -0.53
CTSA-213ENST00000606782 ALKBH2Q6NS38 261 aa11.74□□□□□ -0.53
CTSA-213ENST00000606782 PAQR6Q6TCH4 344 aa11.74□□□□□ -0.53
CTSA-213ENST00000606782 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.74□□□□□ -0.53
CTSA-213ENST00000606782 DTX2Q86UW9 622 aa11.74□□□□□ -0.53
CTSA-213ENST00000606782 SPATA24Q86W54 205 aa11.74□□□□□ -0.53
CTSA-213ENST00000606782 PAPD5Q8NDF8 572 aaKnown RBP11.74□□□□□ -0.53
CTSA-213ENST00000606782 ADAMTS16Q8TE57 1224 aa11.74□□□□□ -0.53
CTSA-213ENST00000606782 CANT1Q8WVQ1 401 aa11.74□□□□□ -0.53
CTSA-213ENST00000606782 NEUROG1Q92886 237 aa11.74□□□□□ -0.53
CTSA-213ENST00000606782 SLC47A1Q96FL8 570 aa11.74□□□□□ -0.53
CTSA-213ENST00000606782 DUS3LQ96G46 650 aaKnown RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms