RNA–Protein interactions for RNA: ENST00000584960.1

RIOK3-210, Transcript of RIO kinase 3, humanhuman

TSL 2

Gene RIOK3, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIOK3-210ENST00000584960 IL1RL1Q01638 556 aa13.13□□□□□ -0.31
RIOK3-210ENST00000584960 SEC23BQ15437 767 aa13.13□□□□□ -0.31
RIOK3-210ENST00000584960 MICAQ29983 383 aa13.13□□□□□ -0.31
RIOK3-210ENST00000584960 EXOC3L2Q2M3D2 409 aa13.13□□□□□ -0.31
RIOK3-210ENST00000584960 C1orf94Q6P1W5 598 aa13.13□□□□□ -0.31
RIOK3-210ENST00000584960 NUFIP2Q7Z417 695 aaKnown RBP13.13□□□□□ -0.31
RIOK3-210ENST00000584960 OAFQ86UD1 273 aa13.13□□□□□ -0.31
RIOK3-210ENST00000584960 EPHX4Q8IUS5 362 aa13.13□□□□□ -0.31
RIOK3-210ENST00000584960 ZNF100Q8IYN0 542 aa13.13□□□□□ -0.31
RIOK3-210ENST00000584960 ZIC4Q8N9L1 334 aa13.13□□□□□ -0.31
RIOK3-210ENST00000584960 OR4C15Q8NGM1 316 aa13.13□□□□□ -0.31
RIOK3-210ENST00000584960 GNPDA2Q8TDQ7 276 aa13.13□□□□□ -0.31
RIOK3-210ENST00000584960 RNASE6Q93091 150 aaKnown RBP13.13□□□□□ -0.31
RIOK3-210ENST00000584960 APH1AQ96BI3 265 aa13.13□□□□□ -0.31
RIOK3-210ENST00000584960 UCK2Q9BZX2 261 aa13.13□□□□□ -0.31
RIOK3-210ENST00000584960 B3GAT1Q9P2W7 334 aa13.13□□□□□ -0.31
RIOK3-210ENST00000584960 HIF3AQ9Y2N7 669 aa13.13□□□□□ -0.31
RIOK3-210ENST00000584960 ARRDC5A6NEK1 342 aa13.12□□□□□ -0.31
RIOK3-210ENST00000584960 NPIPB13A6NJU9 1138 aa13.12□□□□□ -0.31
RIOK3-210ENST00000584960 EEF1E1-BLOC1S5C9J1V9 151 aa13.12□□□□□ -0.31
RIOK3-210ENST00000584960 NPIPB4C9JG80 1138 aa13.12□□□□□ -0.31
RIOK3-210ENST00000584960 CLOCKO15516 846 aa13.12□□□□□ -0.31
RIOK3-210ENST00000584960 EEF1E1O43324 174 aaKnown RBP13.12□□□□□ -0.31
RIOK3-210ENST00000584960 RNF13O43567 381 aa13.12□□□□□ -0.31
RIOK3-210ENST00000584960 PIP5K1CO60331 668 aa13.12□□□□□ -0.31
RIOK3-210ENST00000584960 MAKP20794 623 aa13.12□□□□□ -0.31
RIOK3-210ENST00000584960 FASP25445 335 aa13.12□□□□□ -0.31
RIOK3-210ENST00000584960 UQCRC1P31930 480 aa13.12□□□□□ -0.31
RIOK3-210ENST00000584960 RPS4XP62701 263 aaKnown RBP13.12□□□□□ -0.31
RIOK3-210ENST00000584960 LSM11P83369 360 aaKnown RBP eCLIP13.12□□□□□ -0.31
RIOK3-210ENST00000584960 KPNB1Q14974 876 aaKnown RBP13.12□□□□□ -0.31
RIOK3-210ENST00000584960 ZBED5Q49AG3 693 aa13.12□□□□□ -0.31
RIOK3-210ENST00000584960 NHLRC1Q6VVB1 395 aa13.12□□□□□ -0.31
RIOK3-210ENST00000584960 AAED1Q7RTV5 226 aa13.12□□□□□ -0.31
RIOK3-210ENST00000584960 HDDC2Q7Z4H3 204 aa13.12□□□□□ -0.31
RIOK3-210ENST00000584960 ZER1Q7Z7L7 766 aa13.12□□□□□ -0.31
RIOK3-210ENST00000584960 KIF18BQ86Y91 864 aa13.12□□□□□ -0.31
RIOK3-210ENST00000584960 KDM8Q8N371 416 aa13.12□□□□□ -0.31
RIOK3-210ENST00000584960 ZNF610Q8N9Z0 462 aa13.12□□□□□ -0.31
RIOK3-210ENST00000584960 POMGNT2Q8NAT1 580 aa13.12□□□□□ -0.31
RIOK3-210ENST00000584960 NRBF2Q96F24 287 aa13.12□□□□□ -0.31
RIOK3-210ENST00000584960 ADAD1Q96M93 576 aaKnown RBP13.12□□□□□ -0.31
RIOK3-210ENST00000584960 BDH2Q9BUT1 245 aa13.12□□□□□ -0.31
RIOK3-210ENST00000584960 RBM24Q9BX46 236 aaKnown RBP13.12□□□□□ -0.31
RIOK3-210ENST00000584960 SLC24A3Q9HC58 644 aa13.12□□□□□ -0.31
RIOK3-210ENST00000584960 STX18Q9P2W9 335 aaKnown RBP13.12□□□□□ -0.31
RIOK3-210ENST00000584960 SEC14L4Q9UDX3 406 aa13.12□□□□□ -0.31
RIOK3-210ENST00000584960 A0A1W2PRG6 482 aa13.11□□□□□ -0.31
RIOK3-210ENST00000584960 ZNF726A6NNF4 738 aa13.11□□□□□ -0.31
RIOK3-210ENST00000584960 PTP4A3O75365 173 aa13.11□□□□□ -0.31
RIOK3-210ENST00000584960 HPRP00739 348 aa13.11□□□□□ -0.31
RIOK3-210ENST00000584960 RNF224P0DH78 156 aa13.11□□□□□ -0.31
RIOK3-210ENST00000584960 FPR3P25089 353 aa13.11□□□□□ -0.31
RIOK3-210ENST00000584960 CLDN17P56750 224 aa13.11□□□□□ -0.31
RIOK3-210ENST00000584960 RPL18Q07020 188 aaKnown RBP13.11□□□□□ -0.31
RIOK3-210ENST00000584960 TFF3Q07654 80 aa13.11□□□□□ -0.31
RIOK3-210ENST00000584960 P2RY6Q15077 328 aa13.11□□□□□ -0.31
RIOK3-210ENST00000584960 CDSNQ15517 529 aa13.11□□□□□ -0.31
RIOK3-210ENST00000584960 CASP12Q6UXS9 341 aa13.11□□□□□ -0.31
RIOK3-210ENST00000584960 TFAP2EQ6VUC0 442 aa13.11□□□□□ -0.31
RIOK3-210ENST00000584960 ABHD12BQ7Z5M8 362 aaPredicted RBP13.11□□□□□ -0.31
RIOK3-210ENST00000584960 LUZP2Q86TE4 346 aa13.11□□□□□ -0.31
RIOK3-210ENST00000584960 ZNF775Q96BV0 537 aaPredicted RBP13.11□□□□□ -0.31
RIOK3-210ENST00000584960 FAM46AQ96IP4 442 aaKnown RBP13.11□□□□□ -0.31
RIOK3-210ENST00000584960 ZNF385AQ96PM9 386 aaKnown RBP13.11□□□□□ -0.31
RIOK3-210ENST00000584960 PSMG3-AS1Q96PY0 264 aa13.11□□□□□ -0.31
RIOK3-210ENST00000584960 USB1Q9BQ65 265 aaKnown RBP13.11□□□□□ -0.31
RIOK3-210ENST00000584960 HDHD5Q9BXW7 423 aa13.11□□□□□ -0.31
RIOK3-210ENST00000584960 OPN3Q9H1Y3 402 aaPredicted RBP13.11□□□□□ -0.31
RIOK3-210ENST00000584960 DENND2DQ9H6A0 471 aaPredicted RBP13.11□□□□□ -0.31
RIOK3-210ENST00000584960 C12orf49Q9H741 205 aa13.11□□□□□ -0.31
RIOK3-210ENST00000584960 INIPQ9NRY2 104 aa13.11□□□□□ -0.31
RIOK3-210ENST00000584960 MGAT4BQ9UQ53 548 aa13.11□□□□□ -0.31
RIOK3-210ENST00000584960 DOPEY2Q9Y3R5 2298 aa13.11□□□□□ -0.31
RIOK3-210ENST00000584960 ALPK2Q86TB3 2170 aa13.11□□□□□ -0.31
RIOK3-210ENST00000584960 NKX2-6A6NCS4 301 aa13.1□□□□□ -0.31
RIOK3-210ENST00000584960 UNC119BA6NIH7 251 aa13.1□□□□□ -0.31
RIOK3-210ENST00000584960 CENPBD1B2RD01 187 aa13.1□□□□□ -0.31
RIOK3-210ENST00000584960 C11orf98E9PRG8 122 aa13.1□□□□□ -0.31
RIOK3-210ENST00000584960 KLF4O43474 513 aa13.1□□□□□ -0.31
RIOK3-210ENST00000584960 TRAF3IP2O43734 574 aaPredicted RBP13.1□□□□□ -0.31
RIOK3-210ENST00000584960 E2F6O75461 281 aa13.1□□□□□ -0.31
RIOK3-210ENST00000584960 TIPRLO75663 272 aa13.1□□□□□ -0.31
RIOK3-210ENST00000584960 GSTM3P21266 225 aa13.1□□□□□ -0.31
RIOK3-210ENST00000584960 CD79BP40259 229 aa13.1□□□□□ -0.31
RIOK3-210ENST00000584960 AQP2P41181 271 aa13.1□□□□□ -0.31
RIOK3-210ENST00000584960 GPR4P46093 362 aa13.1□□□□□ -0.31
RIOK3-210ENST00000584960 GSSP48637 474 aa13.1□□□□□ -0.31
RIOK3-210ENST00000584960 ERFP50548 548 aa13.1□□□□□ -0.31
RIOK3-210ENST00000584960 DAP3P51398 398 aaKnown RBP13.1□□□□□ -0.31
RIOK3-210ENST00000584960 SORDQ00796 357 aa13.1□□□□□ -0.31
RIOK3-210ENST00000584960 POU3F1Q03052 451 aaPredicted RBP13.1□□□□□ -0.31
RIOK3-210ENST00000584960 COX10Q12887 443 aa13.1□□□□□ -0.31
RIOK3-210ENST00000584960 TSPAN31Q12999 210 aa13.1□□□□□ -0.31
RIOK3-210ENST00000584960 LAPTM4AQ15012 233 aa13.1□□□□□ -0.31
RIOK3-210ENST00000584960 ATP6AP1Q15904 470 aa13.1□□□□□ -0.31
RIOK3-210ENST00000584960 ALG10Q5BKT4 473 aa13.1□□□□□ -0.31
RIOK3-210ENST00000584960 FBXW9Q5XUX1 488 aa13.1□□□□□ -0.31
RIOK3-210ENST00000584960 ZNF770Q6IQ21 691 aaPredicted RBP13.1□□□□□ -0.31
RIOK3-210ENST00000584960 RPL13AP3Q6NVV1 102 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 138.8 ms