RNA–Protein interactions for RNA: ENST00000555309.5

HNRNPC-219, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5 BASIC

Gene HNRNPC, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-219ENST00000555309 IL11P20809 199 aa9.02□□□□□ -0.96
HNRNPC-219ENST00000555309 PTGER4P35408 488 aa9.02□□□□□ -0.96
HNRNPC-219ENST00000555309 TIMP3P35625 211 aa9.02□□□□□ -0.96
HNRNPC-219ENST00000555309 SLC15A1P46059 708 aa9.02□□□□□ -0.96
HNRNPC-219ENST00000555309 GSSP48637 474 aa9.02□□□□□ -0.96
HNRNPC-219ENST00000555309 DSCR4P56555 118 aaPredicted RBP9.02□□□□□ -0.96
HNRNPC-219ENST00000555309 POU6F2P78424 691 aaPredicted RBP9.02□□□□□ -0.96
HNRNPC-219ENST00000555309 PIGFQ07326 219 aa9.02□□□□□ -0.96
HNRNPC-219ENST00000555309 TSPAN31Q12999 210 aa9.02□□□□□ -0.96
HNRNPC-219ENST00000555309 IRF3Q14653 427 aa9.02□□□□□ -0.96
HNRNPC-219ENST00000555309 OCLNQ16625 522 aa9.02□□□□□ -0.96
HNRNPC-219ENST00000555309 RAET1LQ5VY80 246 aa9.02□□□□□ -0.96
HNRNPC-219ENST00000555309 RASSF6Q6ZTQ3 369 aa9.02□□□□□ -0.96
HNRNPC-219ENST00000555309 AHSA2Q719I0 299 aa9.02□□□□□ -0.96
HNRNPC-219ENST00000555309 RANBP3LQ86VV4 465 aaPredicted RBP9.02□□□□□ -0.96
HNRNPC-219ENST00000555309 GRAMD2AQ8IUY3 354 aa9.02□□□□□ -0.96
HNRNPC-219ENST00000555309 PM20D2Q8IYS1 436 aa9.02□□□□□ -0.96
HNRNPC-219ENST00000555309 CLDN22Q8N7P3 220 aa9.02□□□□□ -0.96
HNRNPC-219ENST00000555309 OR8J1Q8NGP2 316 aa9.02□□□□□ -0.96
HNRNPC-219ENST00000555309 MBD3L2Q8NHZ7 208 aaPredicted RBP9.02□□□□□ -0.96
HNRNPC-219ENST00000555309 ZPLD1Q8TCW7 415 aa9.02□□□□□ -0.96
HNRNPC-219ENST00000555309 UBE2FQ969M7 185 aa9.02□□□□□ -0.96
HNRNPC-219ENST00000555309 INTS12Q96CB8 462 aaKnown RBP9.02□□□□□ -0.96
HNRNPC-219ENST00000555309 ZG16BQ96DA0 208 aa9.02□□□□□ -0.96
HNRNPC-219ENST00000555309 YIPF6Q96EC8 236 aa9.02□□□□□ -0.96
HNRNPC-219ENST00000555309 C1GALT1C1Q96EU7 318 aa9.02□□□□□ -0.96
HNRNPC-219ENST00000555309 ZNF845Q96IR2 970 aaPredicted RBP9.02□□□□□ -0.96
HNRNPC-219ENST00000555309 COPS4Q9BT78 406 aa9.02□□□□□ -0.96
HNRNPC-219ENST00000555309 POLDIP3Q9BY77 421 aaKnown RBP9.02□□□□□ -0.96
HNRNPC-219ENST00000555309 TBL1XR1Q9BZK7 514 aa9.02□□□□□ -0.96
HNRNPC-219ENST00000555309 ARMC7Q9H6L4 198 aa9.02□□□□□ -0.96
HNRNPC-219ENST00000555309 TESQ9UGI8 421 aaKnown RBP9.02□□□□□ -0.96
HNRNPC-219ENST00000555309 MKLN1Q9UL63 735 aa9.02□□□□□ -0.96
HNRNPC-219ENST00000555309 VDAC3Q9Y277 283 aa9.02□□□□□ -0.96
HNRNPC-219ENST00000555309 CDHR4A6H8M9 788 aa9.02□□□□□ -0.97
HNRNPC-219ENST00000555309 CD8B2A6NJW9 211 aa9.02□□□□□ -0.97
HNRNPC-219ENST00000555309 HSPB2A8KAH6 182 aa9.02□□□□□ -0.97
HNRNPC-219ENST00000555309 ALG1L2C9J202 215 aa9.02□□□□□ -0.97
HNRNPC-219ENST00000555309 H3BML4 177 aa9.02□□□□□ -0.97
HNRNPC-219ENST00000555309 SEC14L5O43304 696 aa9.02□□□□□ -0.97
HNRNPC-219ENST00000555309 KLF4O43474 513 aa9.02□□□□□ -0.97
HNRNPC-219ENST00000555309 INMTO95050 263 aa9.02□□□□□ -0.97
HNRNPC-219ENST00000555309 IL2RAP01589 272 aa9.02□□□□□ -0.97
HNRNPC-219ENST00000555309 TBXA2RP21731 343 aa9.02□□□□□ -0.97
HNRNPC-219ENST00000555309 FPR3P25089 353 aa9.02□□□□□ -0.97
HNRNPC-219ENST00000555309 UQCRC1P31930 480 aa9.02□□□□□ -0.97
HNRNPC-219ENST00000555309 OMPP47874 163 aa9.02□□□□□ -0.97
HNRNPC-219ENST00000555309 EFNB1P98172 346 aa9.02□□□□□ -0.97
HNRNPC-219ENST00000555309 CDK5Q00535 292 aa9.02□□□□□ -0.97
HNRNPC-219ENST00000555309 HSPB2Q16082 182 aa9.02□□□□□ -0.97
HNRNPC-219ENST00000555309 MEDAGQ5VYS4 303 aa9.02□□□□□ -0.97
HNRNPC-219ENST00000555309 RNLSQ5VYX0 342 aa9.02□□□□□ -0.97
HNRNPC-219ENST00000555309 CBLN3Q6UW01 205 aa9.02□□□□□ -0.97
HNRNPC-219ENST00000555309 LINC00299Q6ZSB3 139 aa9.02□□□□□ -0.97
HNRNPC-219ENST00000555309 SLC16A12Q6ZSM3 486 aa9.02□□□□□ -0.97
HNRNPC-219ENST00000555309 HMGN2P46Q86SG4 172 aa9.02□□□□□ -0.97
HNRNPC-219ENST00000555309 CLIP4Q8N3C7 705 aa9.02□□□□□ -0.97
HNRNPC-219ENST00000555309 SMPDL3BQ92485 455 aa9.02□□□□□ -0.97
HNRNPC-219ENST00000555309 GGHQ92820 318 aa9.02□□□□□ -0.97
HNRNPC-219ENST00000555309 MCHR1Q99705 422 aa9.02□□□□□ -0.97
HNRNPC-219ENST00000555309 FUNDC2Q9BWH2 189 aa9.02□□□□□ -0.97
HNRNPC-219ENST00000555309 CDCA4Q9BXL8 241 aa9.02□□□□□ -0.97
HNRNPC-219ENST00000555309 CCDC90BQ9GZT6 254 aa9.02□□□□□ -0.97
HNRNPC-219ENST00000555309 CALHM2Q9HA72 323 aa9.02□□□□□ -0.97
HNRNPC-219ENST00000555309 KRCC1Q9NPI7 259 aaPredicted RBP9.02□□□□□ -0.97
HNRNPC-219ENST00000555309 CLN6Q9NWW5 311 aa9.02□□□□□ -0.97
HNRNPC-219ENST00000555309 CLCF1Q9UBD9 225 aa9.02□□□□□ -0.97
HNRNPC-219ENST00000555309 KCNE5Q9UJ90 142 aa9.02□□□□□ -0.97
HNRNPC-219ENST00000555309 MRPS18CQ9Y3D5 142 aaKnown RBP9.02□□□□□ -0.97
HNRNPC-219ENST00000555309 VPS13CQ709C8 3753 aa9.01□□□□□ -0.97
HNRNPC-219ENST00000555309 ANKRD17O75179 2603 aaKnown RBP9.01□□□□□ -0.97
HNRNPC-219ENST00000555309 CLDN24A6NM45 220 aa9.01□□□□□ -0.97
HNRNPC-219ENST00000555309 NDUFB5O43674 189 aa9.01□□□□□ -0.97
HNRNPC-219ENST00000555309 EFNA2O43921 213 aa9.01□□□□□ -0.97
HNRNPC-219ENST00000555309 PSMD4P55036 377 aaKnown RBP9.01□□□□□ -0.97
HNRNPC-219ENST00000555309 PSPHP78330 225 aa9.01□□□□□ -0.97
HNRNPC-219ENST00000555309 TOMM34Q15785 309 aaPredicted RBP9.01□□□□□ -0.97
HNRNPC-219ENST00000555309 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.01□□□□□ -0.97
HNRNPC-219ENST00000555309 TMEM44Q2T9K0 475 aa9.01□□□□□ -0.97
HNRNPC-219ENST00000555309 CASP12Q6UXS9 341 aa9.01□□□□□ -0.97
HNRNPC-219ENST00000555309 PTCHD4Q6ZW05 846 aa9.01□□□□□ -0.97
HNRNPC-219ENST00000555309 PLEKHM3Q6ZWE6 761 aa9.01□□□□□ -0.97
HNRNPC-219ENST00000555309 MBOAT2Q6ZWT7 520 aa9.01□□□□□ -0.97
HNRNPC-219ENST00000555309 LUZP2Q86TE4 346 aa9.01□□□□□ -0.97
HNRNPC-219ENST00000555309 CMIPQ8IY22 773 aa9.01□□□□□ -0.97
HNRNPC-219ENST00000555309 RNF113BQ8IZP6 322 aaKnown RBP9.01□□□□□ -0.97
HNRNPC-219ENST00000555309 PIGXQ8TBF5 258 aa9.01□□□□□ -0.97
HNRNPC-219ENST00000555309 POC1BQ8TC44 478 aa9.01□□□□□ -0.97
HNRNPC-219ENST00000555309 SLC41A3Q96GZ6 507 aa9.01□□□□□ -0.97
HNRNPC-219ENST00000555309 RHNO1Q9BSD3 238 aa9.01□□□□□ -0.97
HNRNPC-219ENST00000555309 PRRG3Q9BZD7 231 aa9.01□□□□□ -0.97
HNRNPC-219ENST00000555309 NAA50Q9GZZ1 169 aaKnown RBP9.01□□□□□ -0.97
HNRNPC-219ENST00000555309 SDHAF3Q9NRP4 125 aa9.01□□□□□ -0.97
HNRNPC-219ENST00000555309 CRIM1Q9NZV1 1036 aa9.01□□□□□ -0.97
HNRNPC-219ENST00000555309 AASSQ9UDR5 926 aa9.01□□□□□ -0.97
HNRNPC-219ENST00000555309 MRTO4Q9UKD2 239 aaKnown RBP9.01□□□□□ -0.97
HNRNPC-219ENST00000555309 IGLV3-32A0A0A0MS00 114 aa9□□□□□ -0.97
HNRNPC-219ENST00000555309 TRAPPC13A5PLN9 417 aa9□□□□□ -0.97
HNRNPC-219ENST00000555309 EEF1E1-BLOC1S5C9J1V9 151 aa9□□□□□ -0.97
HNRNPC-219ENST00000555309 NPIPB9F8W1W9 429 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms