RNA–Protein interactions for RNA: ENST00000553904.1

FOXN3-205, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 337 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-205ENST00000553904 LGI1O95970 557 aa5.69□□□□□ -1.5
FOXN3-205ENST00000553904 PTHP01270 115 aa5.69□□□□□ -1.5
FOXN3-205ENST00000553904 TROVE2P10155 538 aaKnown RBP eCLIP5.69□□□□□ -1.5
FOXN3-205ENST00000553904 CD247P20963 164 aa5.69□□□□□ -1.5
FOXN3-205ENST00000553904 USF1P22415 310 aaPredicted RBP5.69□□□□□ -1.5
FOXN3-205ENST00000553904 GRPRP30550 384 aa5.69□□□□□ -1.5
FOXN3-205ENST00000553904 LSP1P33241 339 aa5.69□□□□□ -1.5
FOXN3-205ENST00000553904 CAPZA2P47755 286 aa5.69□□□□□ -1.5
FOXN3-205ENST00000553904 PDLIM4P50479 330 aa5.69□□□□□ -1.5
FOXN3-205ENST00000553904 P2RY4P51582 365 aa5.69□□□□□ -1.5
FOXN3-205ENST00000553904 FOXG1P55316 489 aaPredicted RBP5.69□□□□□ -1.5
FOXN3-205ENST00000553904 SELENOVP59797 346 aa5.69□□□□□ -1.5
FOXN3-205ENST00000553904 LSM11P83369 360 aaKnown RBP eCLIP5.69□□□□□ -1.5
FOXN3-205ENST00000553904 ARF1P84077 181 aaKnown RBP5.69□□□□□ -1.5
FOXN3-205ENST00000553904 HOXC5Q00444 222 aa5.69□□□□□ -1.5
FOXN3-205ENST00000553904 NAAAQ02083 359 aa5.69□□□□□ -1.5
FOXN3-205ENST00000553904 PUDPQ08623 228 aa5.69□□□□□ -1.5
FOXN3-205ENST00000553904 NFYCQ13952 458 aa5.69□□□□□ -1.5
FOXN3-205ENST00000553904 MAPRE2Q15555 327 aa5.69□□□□□ -1.5
FOXN3-205ENST00000553904 NPTX1Q15818 432 aa5.69□□□□□ -1.5
FOXN3-205ENST00000553904 TRMT5Q32P41 509 aaKnown RBP5.69□□□□□ -1.5
FOXN3-205ENST00000553904 CHRFAM7AQ494W8 412 aa5.69□□□□□ -1.5
FOXN3-205ENST00000553904 HIKESHIQ53FT3 197 aa5.69□□□□□ -1.5
FOXN3-205ENST00000553904 C11orf71Q6IPW1 123 aa5.69□□□□□ -1.5
FOXN3-205ENST00000553904 DLEU7Q6UYE1 221 aa5.69□□□□□ -1.5
FOXN3-205ENST00000553904 DNM1P46Q6ZS02 220 aa5.69□□□□□ -1.5
FOXN3-205ENST00000553904 SLC46A3Q7Z3Q1 461 aa5.69□□□□□ -1.5
FOXN3-205ENST00000553904 PIWIL3Q7Z3Z3 882 aaKnown RBP5.69□□□□□ -1.5
FOXN3-205ENST00000553904 PXKQ7Z7A4 578 aa5.69□□□□□ -1.5
FOXN3-205ENST00000553904 DPPA2Q7Z7J5 298 aa5.69□□□□□ -1.5
FOXN3-205ENST00000553904 HIPK1Q86Z02 1210 aa5.69□□□□□ -1.5
FOXN3-205ENST00000553904 KDM8Q8N371 416 aa5.69□□□□□ -1.5
FOXN3-205ENST00000553904 NUP37Q8NFH4 326 aa5.69□□□□□ -1.5
FOXN3-205ENST00000553904 OR6N1Q8NGY5 312 aa5.69□□□□□ -1.5
FOXN3-205ENST00000553904 ZNF417Q8TAU3 575 aa5.69□□□□□ -1.5
FOXN3-205ENST00000553904 NEU4Q8WWR8 484 aaPredicted RBP5.69□□□□□ -1.5
FOXN3-205ENST00000553904 FBXO17Q96EF6 278 aa5.69□□□□□ -1.5
FOXN3-205ENST00000553904 KTI12Q96EK9 354 aaPredicted RBP5.69□□□□□ -1.5
FOXN3-205ENST00000553904 MPP4Q96JB8 637 aa5.69□□□□□ -1.5
FOXN3-205ENST00000553904 ZNF587Q96SQ5 575 aaPredicted RBP5.69□□□□□ -1.5
FOXN3-205ENST00000553904 CGREF1Q99674 301 aa5.69□□□□□ -1.5
FOXN3-205ENST00000553904 MCHR1Q99705 422 aa5.69□□□□□ -1.5
FOXN3-205ENST00000553904 VRK1Q99986 396 aaPredicted RBP5.69□□□□□ -1.5
FOXN3-205ENST00000553904 ECSITQ9BQ95 431 aa5.69□□□□□ -1.5
FOXN3-205ENST00000553904 MS4A5Q9H3V2 200 aa5.69□□□□□ -1.5
FOXN3-205ENST00000553904 CRLF2Q9HC73 371 aa5.69□□□□□ -1.5
FOXN3-205ENST00000553904 GPR35Q9HC97 309 aa5.69□□□□□ -1.5
FOXN3-205ENST00000553904 CA10Q9NS85 328 aa5.69□□□□□ -1.5
FOXN3-205ENST00000553904 GDF2Q9UK05 429 aaPredicted RBP5.69□□□□□ -1.5
FOXN3-205ENST00000553904 CDC42EP3Q9UKI2 254 aa5.69□□□□□ -1.5
FOXN3-205ENST00000553904 POLQO75417 2590 aa5.69□□□□□ -1.5
FOXN3-205ENST00000553904 ABCA4P78363 2273 aa5.69□□□□□ -1.5
FOXN3-205ENST00000553904 HIVEP1P15822 2718 aa5.68□□□□□ -1.5
FOXN3-205ENST00000553904 TRBV5-3A0A0A0MS03 114 aa5.68□□□□□ -1.5
FOXN3-205ENST00000553904 A0A0B4J2E0 115 aa5.68□□□□□ -1.5
FOXN3-205ENST00000553904 IGHV1-18A0A0C4DH31 117 aa5.68□□□□□ -1.5
FOXN3-205ENST00000553904 A0A0G2JND7 137 aa5.68□□□□□ -1.5
FOXN3-205ENST00000553904 A0A1B0GX12 115 aa5.68□□□□□ -1.5
FOXN3-205ENST00000553904 SLC35F4A4IF30 521 aa5.68□□□□□ -1.5
FOXN3-205ENST00000553904 TRAPPC13A5PLN9 417 aa5.68□□□□□ -1.5
FOXN3-205ENST00000553904 HTR3EA5X5Y0 456 aa5.68□□□□□ -1.5
FOXN3-205ENST00000553904 MS4A18H0YCH9 400 aa5.68□□□□□ -1.5
FOXN3-205ENST00000553904 M0R3G1 203 aa5.68□□□□□ -1.5
FOXN3-205ENST00000553904 PLPP3O14495 311 aa5.68□□□□□ -1.5
FOXN3-205ENST00000553904 CHP2O43745 196 aa5.68□□□□□ -1.5
FOXN3-205ENST00000553904 TPST1O60507 370 aa5.68□□□□□ -1.5
FOXN3-205ENST00000553904 EDF1O60869 148 aaKnown RBP5.68□□□□□ -1.5
FOXN3-205ENST00000553904 FZD7O75084 574 aa5.68□□□□□ -1.5
FOXN3-205ENST00000553904 NDUFS7O75251 213 aa5.68□□□□□ -1.5
FOXN3-205ENST00000553904 ZNF432O94892 652 aa5.68□□□□□ -1.5
FOXN3-205ENST00000553904 FARS2O95363 451 aaKnown RBP5.68□□□□□ -1.5
FOXN3-205ENST00000553904 IGKV3-15P01624 115 aa5.68□□□□□ -1.5
FOXN3-205ENST00000553904 IGLV1-44P01699 117 aa5.68□□□□□ -1.5
FOXN3-205ENST00000553904 OR4A8P0C604 315 aa5.68□□□□□ -1.5
FOXN3-205ENST00000553904 ADORA3P0DMS8 318 aa5.68□□□□□ -1.5
FOXN3-205ENST00000553904 HOXB9P17482 250 aaPredicted RBP5.68□□□□□ -1.5
FOXN3-205ENST00000553904 NPR2P20594 1047 aa5.68□□□□□ -1.5
FOXN3-205ENST00000553904 PTNP21246 168 aa5.68□□□□□ -1.5
FOXN3-205ENST00000553904 CBLP22681 906 aa5.68□□□□□ -1.5
FOXN3-205ENST00000553904 AQP1P29972 269 aa5.68□□□□□ -1.5
FOXN3-205ENST00000553904 GUCA1AP43080 201 aaPredicted RBP5.68□□□□□ -1.5
FOXN3-205ENST00000553904 GZMKP49863 264 aa5.68□□□□□ -1.5
FOXN3-205ENST00000553904 CDH12P55289 794 aa5.68□□□□□ -1.5
FOXN3-205ENST00000553904 GALK2Q01415 458 aa5.68□□□□□ -1.5
FOXN3-205ENST00000553904 EFNB3Q15768 340 aa5.68□□□□□ -1.5
FOXN3-205ENST00000553904 DUSP7Q16829 419 aa5.68□□□□□ -1.5
FOXN3-205ENST00000553904 SWI5Q1ZZU3 235 aa5.68□□□□□ -1.5
FOXN3-205ENST00000553904 GSG1Q2KHT4 349 aa5.68□□□□□ -1.5
FOXN3-205ENST00000553904 CEACAM16Q2WEN9 425 aa5.68□□□□□ -1.5
FOXN3-205ENST00000553904 MS4A18Q3C1V0 323 aa5.68□□□□□ -1.5
FOXN3-205ENST00000553904 IQCCQ4KMZ1 466 aa5.68□□□□□ -1.5
FOXN3-205ENST00000553904 ENTPD8Q5MY95 495 aa5.68□□□□□ -1.5
FOXN3-205ENST00000553904 ERICH5Q6P6B1 374 aa5.68□□□□□ -1.5
FOXN3-205ENST00000553904 HDDC2Q7Z4H3 204 aa5.68□□□□□ -1.5
FOXN3-205ENST00000553904 DHDDSQ86SQ9 333 aa5.68□□□□□ -1.5
FOXN3-205ENST00000553904 SMYD1Q8NB12 490 aa5.68□□□□□ -1.5
FOXN3-205ENST00000553904 PCYOX1LQ8NBM8 494 aa5.68□□□□□ -1.5
FOXN3-205ENST00000553904 OR5J2Q8NH18 312 aa5.68□□□□□ -1.5
FOXN3-205ENST00000553904 SLC41A3Q96GZ6 507 aa5.68□□□□□ -1.5
FOXN3-205ENST00000553904 ALKBH3Q96Q83 286 aaPredicted RBP5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 122 ms