RNA–Protein interactions for RNA: ENST00000543627.1

DDB1-222, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-222ENST00000543627 MEX3DQ86XN8 651 aaKnown RBP9.73□□□□□ -0.85
DDB1-222ENST00000543627 PIAS4Q8N2W9 510 aaPredicted RBP9.73□□□□□ -0.85
DDB1-222ENST00000543627 POMGNT2Q8NAT1 580 aa9.73□□□□□ -0.85
DDB1-222ENST00000543627 OR6N1Q8NGY5 312 aa9.73□□□□□ -0.85
DDB1-222ENST00000543627 OR5J2Q8NH18 312 aa9.73□□□□□ -0.85
DDB1-222ENST00000543627 BCAS4Q8TDM0 211 aa9.73□□□□□ -0.85
DDB1-222ENST00000543627 TMEM239Q8WW34 195 aa9.73□□□□□ -0.85
DDB1-222ENST00000543627 TMEM45BQ96B21 275 aa9.73□□□□□ -0.85
DDB1-222ENST00000543627 SGTBQ96EQ0 304 aa9.73□□□□□ -0.85
DDB1-222ENST00000543627 MPP4Q96JB8 637 aa9.73□□□□□ -0.85
DDB1-222ENST00000543627 OR10A4Q9H209 315 aa9.73□□□□□ -0.85
DDB1-222ENST00000543627 ESRP2Q9H6T0 727 aaKnown RBP9.73□□□□□ -0.85
DDB1-222ENST00000543627 RPS6KA6Q9UK32 745 aa9.73□□□□□ -0.85
DDB1-222ENST00000543627 MED31Q9Y3C7 131 aa9.73□□□□□ -0.85
DDB1-222ENST00000543627 FAM32AQ9Y421 112 aaKnown RBP9.73□□□□□ -0.85
DDB1-222ENST00000543627 CORINQ9Y5Q5 1042 aa9.73□□□□□ -0.85
DDB1-222ENST00000543627 SLC35F4A4IF30 521 aa9.72□□□□□ -0.85
DDB1-222ENST00000543627 OR5H1A6NKK0 313 aa9.72□□□□□ -0.85
DDB1-222ENST00000543627 hCG_2039718K7EN88 272 aa9.72□□□□□ -0.85
DDB1-222ENST00000543627 PLPP3O14495 311 aa9.72□□□□□ -0.85
DDB1-222ENST00000543627 PIP5K1CO60331 668 aa9.72□□□□□ -0.85
DDB1-222ENST00000543627 CNOT4O95628 575 aaKnown RBP9.72□□□□□ -0.85
DDB1-222ENST00000543627 MT-ATP6P00846 226 aa9.72□□□□□ -0.85
DDB1-222ENST00000543627 RAF1P04049 648 aa9.72□□□□□ -0.85
DDB1-222ENST00000543627 ITGA5P08648 1049 aa9.72□□□□□ -0.85
DDB1-222ENST00000543627 IFI30P13284 250 aa9.72□□□□□ -0.85
DDB1-222ENST00000543627 IFNGR1P15260 489 aa9.72□□□□□ -0.85
DDB1-222ENST00000543627 MPGP29372 298 aa9.72□□□□□ -0.85
DDB1-222ENST00000543627 CAPZA2P47755 286 aa9.72□□□□□ -0.85
DDB1-222ENST00000543627 MNAT1P51948 309 aa9.72□□□□□ -0.85
DDB1-222ENST00000543627 NR1H2P55055 460 aa9.72□□□□□ -0.85
DDB1-222ENST00000543627 BIDP55957 195 aa9.72□□□□□ -0.85
DDB1-222ENST00000543627 ROR2Q01974 943 aaKnown RBP9.72□□□□□ -0.85
DDB1-222ENST00000543627 MELKQ14680 651 aa9.72□□□□□ -0.85
DDB1-222ENST00000543627 GABRA6Q16445 453 aa9.72□□□□□ -0.85
DDB1-222ENST00000543627 ZNF74Q16587 644 aa9.72□□□□□ -0.85
DDB1-222ENST00000543627 HIKESHIQ53FT3 197 aa9.72□□□□□ -0.85
DDB1-222ENST00000543627 SAMD4BQ5PRF9 694 aaKnown RBP9.72□□□□□ -0.85
DDB1-222ENST00000543627 TIMM23BQ5SRD1 257 aa9.72□□□□□ -0.85
DDB1-222ENST00000543627 OR7E24Q6IFN5 339 aa9.72□□□□□ -0.85
DDB1-222ENST00000543627 ZNF704Q6ZNC4 412 aaPredicted RBP9.72□□□□□ -0.85
DDB1-222ENST00000543627 NANOGNBQ7Z5D8 188 aa9.72□□□□□ -0.85
DDB1-222ENST00000543627 CYP4Z1Q86W10 505 aa9.72□□□□□ -0.85
DDB1-222ENST00000543627 PGAM4Q8N0Y7 254 aa9.72□□□□□ -0.85
DDB1-222ENST00000543627 GEMIN6Q8WXD5 167 aaKnown RBP9.72□□□□□ -0.85
DDB1-222ENST00000543627 AKAP1Q92667 903 aaKnown RBP eCLIP9.72□□□□□ -0.85
DDB1-222ENST00000543627 RADILQ96JH8 1075 aa9.72□□□□□ -0.85
DDB1-222ENST00000543627 PRRC1Q96M27 445 aa9.72□□□□□ -0.85
DDB1-222ENST00000543627 PRSS27Q9BQR3 290 aa9.72□□□□□ -0.85
DDB1-222ENST00000543627 PCDHAC1Q9H158 963 aa9.72□□□□□ -0.85
DDB1-222ENST00000543627 PLEKHF2Q9H8W4 249 aa9.72□□□□□ -0.85
DDB1-222ENST00000543627 MEPEQ9NQ76 525 aaPredicted RBP9.72□□□□□ -0.85
DDB1-222ENST00000543627 C20orf141Q9NUB4 165 aa9.72□□□□□ -0.85
DDB1-222ENST00000543627 NDE1Q9NXR1 346 aa9.72□□□□□ -0.85
DDB1-222ENST00000543627 MRPL39Q9NYK5 338 aaKnown RBP9.72□□□□□ -0.85
DDB1-222ENST00000543627 B3GAT1Q9P2W7 334 aa9.72□□□□□ -0.85
DDB1-222ENST00000543627 ABCD2Q9UBJ2 740 aa9.72□□□□□ -0.85
DDB1-222ENST00000543627 POU2F3Q9UKI9 436 aa9.72□□□□□ -0.85
DDB1-222ENST00000543627 POLQO75417 2590 aa9.72□□□□□ -0.85
DDB1-222ENST00000543627 TEP1Q99973 2627 aaKnown RBP9.72□□□□□ -0.85
DDB1-222ENST00000543627 CSMD1Q96PZ7 3565 aa9.71□□□□□ -0.85
DDB1-222ENST00000543627 DPRXA6NFQ7 191 aa9.71□□□□□ -0.86
DDB1-222ENST00000543627 SEC14L2O76054 403 aa9.71□□□□□ -0.86
DDB1-222ENST00000543627 DIRAS1O95057 198 aa9.71□□□□□ -0.86
DDB1-222ENST00000543627 GOSR1O95249 250 aa9.71□□□□□ -0.86
DDB1-222ENST00000543627 MT-ND1P03886 318 aa9.71□□□□□ -0.86
DDB1-222ENST00000543627 F13BP05160 661 aa9.71□□□□□ -0.86
DDB1-222ENST00000543627 COX5AP20674 150 aa9.71□□□□□ -0.86
DDB1-222ENST00000543627 PRPS1P60891 318 aa9.71□□□□□ -0.86
DDB1-222ENST00000543627 UBE2NP61088 152 aaKnown RBP9.71□□□□□ -0.86
DDB1-222ENST00000543627 TUBA1BP68363 451 aa9.71□□□□□ -0.86
DDB1-222ENST00000543627 TUBA4AP68366 448 aa9.71□□□□□ -0.86
DDB1-222ENST00000543627 BSPH1Q075Z2 132 aa9.71□□□□□ -0.86
DDB1-222ENST00000543627 KRT72Q14CN4 511 aa9.71□□□□□ -0.86
DDB1-222ENST00000543627 ACKR1Q16570 336 aa9.71□□□□□ -0.86
DDB1-222ENST00000543627 ADAM5Q6NVV9 412 aa9.71□□□□□ -0.86
DDB1-222ENST00000543627 TBPL2Q6SJ96 375 aa9.71□□□□□ -0.86
DDB1-222ENST00000543627 ZNF730Q6ZMV8 503 aa9.71□□□□□ -0.86
DDB1-222ENST00000543627 RINLQ6ZS11 566 aa9.71□□□□□ -0.86
DDB1-222ENST00000543627 TUBA1AQ71U36 451 aa9.71□□□□□ -0.86
DDB1-222ENST00000543627 SLC35D2Q76EJ3 337 aa9.71□□□□□ -0.86
DDB1-222ENST00000543627 SCAIQ8N9R8 606 aa9.71□□□□□ -0.86
DDB1-222ENST00000543627 PIK3C3Q8NEB9 887 aa9.71□□□□□ -0.86
DDB1-222ENST00000543627 OR6S1Q8NH40 331 aa9.71□□□□□ -0.86
DDB1-222ENST00000543627 NEUROG1Q92886 237 aa9.71□□□□□ -0.86
DDB1-222ENST00000543627 NSMCE2Q96MF7 247 aa9.71□□□□□ -0.86
DDB1-222ENST00000543627 HS6ST2Q96MM7 605 aa9.71□□□□□ -0.86
DDB1-222ENST00000543627 USB1Q9BQ65 265 aaKnown RBP9.71□□□□□ -0.86
DDB1-222ENST00000543627 FKRPQ9H9S5 495 aa9.71□□□□□ -0.86
DDB1-222ENST00000543627 CRLF2Q9HC73 371 aa9.71□□□□□ -0.86
DDB1-222ENST00000543627 MALT1Q9UDY8 824 aa9.71□□□□□ -0.86
DDB1-222ENST00000543627 A4GNTQ9UNA3 340 aa9.71□□□□□ -0.86
DDB1-222ENST00000543627 SAMD4AQ9UPU9 718 aaKnown RBP9.71□□□□□ -0.86
DDB1-222ENST00000543627 RNF115Q9Y4L5 304 aa9.71□□□□□ -0.86
DDB1-222ENST00000543627 NOX1Q9Y5S8 564 aa9.71□□□□□ -0.86
DDB1-222ENST00000543627 AKAP6Q13023 2319 aa9.71□□□□□ -0.86
DDB1-222ENST00000543627 OR6C65A6NJZ3 312 aa9.7□□□□□ -0.86
DDB1-222ENST00000543627 MCIDASD6RGH6 385 aa9.7□□□□□ -0.86
DDB1-222ENST00000543627 ABCD4O14678 606 aa9.7□□□□□ -0.86
DDB1-222ENST00000543627 TRAF3IP2O43734 574 aaPredicted RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms