RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 SLC25A15Q9Y619 301 aa8.02□□□□□ -1.13
HDAC6-232ENST00000489053 A0A096LPE4 126 aa8.01□□□□□ -1.13
HDAC6-232ENST00000489053 A0A1W2PPZ6 126 aa8.01□□□□□ -1.13
HDAC6-232ENST00000489053 FTCDNL1E5RQL4 147 aa8.01□□□□□ -1.13
HDAC6-232ENST00000489053 H7C1Q1 480 aa8.01□□□□□ -1.13
HDAC6-232ENST00000489053 M0R3G1 203 aa8.01□□□□□ -1.13
HDAC6-232ENST00000489053 FBP2O00757 339 aa8.01□□□□□ -1.13
HDAC6-232ENST00000489053 ATP8B1O43520 1251 aa8.01□□□□□ -1.13
HDAC6-232ENST00000489053 RNF13O43567 381 aa8.01□□□□□ -1.13
HDAC6-232ENST00000489053 CH25HO95992 272 aa8.01□□□□□ -1.13
HDAC6-232ENST00000489053 CRYAAP02489 173 aa8.01□□□□□ -1.13
HDAC6-232ENST00000489053 LSP1P33241 339 aa8.01□□□□□ -1.13
HDAC6-232ENST00000489053 PCBP3P57721 371 aaKnown RBP8.01□□□□□ -1.13
HDAC6-232ENST00000489053 EGR4Q05215 589 aa8.01□□□□□ -1.13
HDAC6-232ENST00000489053 NRF1Q16656 503 aa8.01□□□□□ -1.13
HDAC6-232ENST00000489053 DUSP7Q16829 419 aa8.01□□□□□ -1.13
HDAC6-232ENST00000489053 TBRG1Q3YBR2 411 aa8.01□□□□□ -1.13
HDAC6-232ENST00000489053 ANKRD16Q6P6B7 361 aa8.01□□□□□ -1.13
HDAC6-232ENST00000489053 NANOGNBQ7Z5D8 188 aa8.01□□□□□ -1.13
HDAC6-232ENST00000489053 CPLX4Q7Z7G2 160 aa8.01□□□□□ -1.13
HDAC6-232ENST00000489053 CARM1Q86X55 608 aa8.01□□□□□ -1.13
HDAC6-232ENST00000489053 EPHX4Q8IUS5 362 aa8.01□□□□□ -1.13
HDAC6-232ENST00000489053 ZIC4Q8N9L1 334 aa8.01□□□□□ -1.13
HDAC6-232ENST00000489053 OR6T1Q8NGN1 323 aa8.01□□□□□ -1.13
HDAC6-232ENST00000489053 OR1K1Q8NGR3 316 aa8.01□□□□□ -1.13
HDAC6-232ENST00000489053 RP9Q8TA86 221 aaKnown RBP8.01□□□□□ -1.13
HDAC6-232ENST00000489053 NANOS1Q8WY41 292 aaKnown RBP8.01□□□□□ -1.13
HDAC6-232ENST00000489053 NEUROG1Q92886 237 aa8.01□□□□□ -1.13
HDAC6-232ENST00000489053 TAMM41Q96BW9 452 aa8.01□□□□□ -1.13
HDAC6-232ENST00000489053 RCN3Q96D15 328 aa8.01□□□□□ -1.13
HDAC6-232ENST00000489053 DHRS9Q9BPW9 319 aa8.01□□□□□ -1.13
HDAC6-232ENST00000489053 PTDSS2Q9BVG9 487 aa8.01□□□□□ -1.13
HDAC6-232ENST00000489053 LINC00470Q9BZP3 86 aa8.01□□□□□ -1.13
HDAC6-232ENST00000489053 CCDC134Q9H6E4 229 aa8.01□□□□□ -1.13
HDAC6-232ENST00000489053 NANSQ9NR45 359 aa8.01□□□□□ -1.13
HDAC6-232ENST00000489053 NPAP1Q9NZP6 1156 aa8.01□□□□□ -1.13
HDAC6-232ENST00000489053 ARMCX1Q9P291 453 aa8.01□□□□□ -1.13
HDAC6-232ENST00000489053 SLC7A7Q9UM01 511 aa8.01□□□□□ -1.13
HDAC6-232ENST00000489053 POFUT2Q9Y2G5 429 aa8.01□□□□□ -1.13
HDAC6-232ENST00000489053 PMF1-BGLAPU3KQ54 211 aa8.01□□□□□ -1.13
HDAC6-232ENST00000489053 HEATR5AQ86XA9 2040 aa8.01□□□□□ -1.13
HDAC6-232ENST00000489053 IGKV1D-42A0A075B6H8 117 aa8□□□□□ -1.13
HDAC6-232ENST00000489053 A0A1W2PRG6 482 aa8□□□□□ -1.13
HDAC6-232ENST00000489053 ELOVL7A1L3X0 281 aa8□□□□□ -1.13
HDAC6-232ENST00000489053 FAM220BPB1ANY3 271 aa8□□□□□ -1.13
HDAC6-232ENST00000489053 MCIDASD6RGH6 385 aa8□□□□□ -1.13
HDAC6-232ENST00000489053 C11orf98E9PRG8 122 aa8□□□□□ -1.13
HDAC6-232ENST00000489053 UPK3AO75631 287 aa8□□□□□ -1.13
HDAC6-232ENST00000489053 TP53P04637 393 aaPredicted RBP8□□□□□ -1.13
HDAC6-232ENST00000489053 SOD3P08294 240 aa8□□□□□ -1.13
HDAC6-232ENST00000489053 HOXB1P14653 301 aaPredicted RBP8□□□□□ -1.13
HDAC6-232ENST00000489053 NTF4P34130 210 aa8□□□□□ -1.13
HDAC6-232ENST00000489053 CDKN1AP38936 164 aa8□□□□□ -1.13
HDAC6-232ENST00000489053 CSNK1A1P48729 337 aa8□□□□□ -1.13
HDAC6-232ENST00000489053 NUDT6P53370 316 aa8□□□□□ -1.13
HDAC6-232ENST00000489053 FOXG1P55316 489 aaPredicted RBP8□□□□□ -1.13
HDAC6-232ENST00000489053 ARF1P84077 181 aaKnown RBP8□□□□□ -1.13
HDAC6-232ENST00000489053 RAB35Q15286 201 aa8□□□□□ -1.13
HDAC6-232ENST00000489053 NPTX1Q15818 432 aa8□□□□□ -1.13
HDAC6-232ENST00000489053 CEACAM16Q2WEN9 425 aa8□□□□□ -1.13
HDAC6-232ENST00000489053 ZNF544Q6NX49 715 aa8□□□□□ -1.13
HDAC6-232ENST00000489053 HDDC2Q7Z4H3 204 aa8□□□□□ -1.13
HDAC6-232ENST00000489053 SPATA21Q7Z572 469 aa8□□□□□ -1.13
HDAC6-232ENST00000489053 COMTD1Q86VU5 262 aa8□□□□□ -1.13
HDAC6-232ENST00000489053 CCDC36Q8IYA8 594 aa8□□□□□ -1.13
HDAC6-232ENST00000489053 MUC15Q8N387 334 aa8□□□□□ -1.13
HDAC6-232ENST00000489053 POU5F2Q8N7G0 328 aa8□□□□□ -1.13
HDAC6-232ENST00000489053 ANKK1Q8NFD2 765 aa8□□□□□ -1.13
HDAC6-232ENST00000489053 OR5J2Q8NH18 312 aa8□□□□□ -1.13
HDAC6-232ENST00000489053 ADAMTS16Q8TE57 1224 aa8□□□□□ -1.13
HDAC6-232ENST00000489053 C10orf82Q8WW14 230 aa8□□□□□ -1.13
HDAC6-232ENST00000489053 CMTM5Q96DZ9 223 aa8□□□□□ -1.13
HDAC6-232ENST00000489053 SLC41A3Q96GZ6 507 aa8□□□□□ -1.13
HDAC6-232ENST00000489053 SLC38A2Q96QD8 506 aa8□□□□□ -1.13
HDAC6-232ENST00000489053 ULBP2Q9BZM5 246 aa8□□□□□ -1.13
HDAC6-232ENST00000489053 SLC19A3Q9BZV2 496 aa8□□□□□ -1.13
HDAC6-232ENST00000489053 POLR2J2Q9GZM3 115 aaKnown RBP8□□□□□ -1.13
HDAC6-232ENST00000489053 NDEL1Q9GZM8 345 aa8□□□□□ -1.13
HDAC6-232ENST00000489053 POLR2J3Q9H1A7 115 aaKnown RBP8□□□□□ -1.13
HDAC6-232ENST00000489053 EFCAB1Q9HAE3 211 aa8□□□□□ -1.13
HDAC6-232ENST00000489053 CRLF2Q9HC73 371 aa8□□□□□ -1.13
HDAC6-232ENST00000489053 MRPL39Q9NYK5 338 aaKnown RBP8□□□□□ -1.13
HDAC6-232ENST00000489053 SEC14L4Q9UDX3 406 aa8□□□□□ -1.13
HDAC6-232ENST00000489053 ZFHX3Q15911 3703 aa8□□□□□ -1.13
HDAC6-232ENST00000489053 ARID1AO14497 2285 aa8□□□□□ -1.13
HDAC6-232ENST00000489053 VPS13CQ709C8 3753 aa7.99□□□□□ -1.13
HDAC6-232ENST00000489053 LOC102725191A0A1B0GVB3 256 aa7.99□□□□□ -1.13
HDAC6-232ENST00000489053 TRIM64A6NGJ6 449 aa7.99□□□□□ -1.13
HDAC6-232ENST00000489053 TRIM64BA6NI03 449 aa7.99□□□□□ -1.13
HDAC6-232ENST00000489053 SHISA9B4DS77 424 aa7.99□□□□□ -1.13
HDAC6-232ENST00000489053 ATP6V1G2-DDX39BF2Z307 99 aa7.99□□□□□ -1.13
HDAC6-232ENST00000489053 PDLIM1O00151 329 aa7.99□□□□□ -1.13
HDAC6-232ENST00000489053 TPST2O60704 377 aa7.99□□□□□ -1.13
HDAC6-232ENST00000489053 OR5F1O95221 314 aa7.99□□□□□ -1.13
HDAC6-232ENST00000489053 ZNF682O95780 498 aa7.99□□□□□ -1.13
HDAC6-232ENST00000489053 BGLAPP02818 100 aa7.99□□□□□ -1.13
HDAC6-232ENST00000489053 ERCC1P07992 297 aaPredicted RBP7.99□□□□□ -1.13
HDAC6-232ENST00000489053 CD79AP11912 226 aa7.99□□□□□ -1.13
HDAC6-232ENST00000489053 COX4I1P13073 169 aa7.99□□□□□ -1.13
HDAC6-232ENST00000489053 NUDT2P50583 147 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms