RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 GALK2Q01415 458 aa13.8□□□□□ -0.2
DDX56-210ENST00000479440 BNIP2Q12982 314 aa13.8□□□□□ -0.2
DDX56-210ENST00000479440 MAD2L1BPQ15013 274 aaPredicted RBP13.8□□□□□ -0.2
DDX56-210ENST00000479440 MSMPQ1L6U9 139 aa13.8□□□□□ -0.2
DDX56-210ENST00000479440 MMEL1Q495T6 779 aa13.8□□□□□ -0.2
DDX56-210ENST00000479440 LIN52Q52LA3 116 aa13.8□□□□□ -0.2
DDX56-210ENST00000479440 DCAF12L2Q5VW00 463 aa13.8□□□□□ -0.2
DDX56-210ENST00000479440 RBMS3Q6XE24 437 aaKnown RBP13.8□□□□□ -0.2
DDX56-210ENST00000479440 ZCCHC23Q6ZST2 131 aa13.8□□□□□ -0.2
DDX56-210ENST00000479440 PEX5LQ8IYB4 626 aa13.8□□□□□ -0.2
DDX56-210ENST00000479440 C4orf33Q8N1A6 199 aa13.8□□□□□ -0.2
DDX56-210ENST00000479440 PIK3C3Q8NEB9 887 aa13.8□□□□□ -0.2
DDX56-210ENST00000479440 ZMAT3Q9HA38 289 aaKnown RBP13.8□□□□□ -0.2
DDX56-210ENST00000479440 PPCSQ9HAB8 311 aa13.8□□□□□ -0.2
DDX56-210ENST00000479440 PRSS51A0A1B0GVH4 220 aa13.79□□□□□ -0.2
DDX56-210ENST00000479440 PRAMEF27A3QJZ7 478 aa13.79□□□□□ -0.2
DDX56-210ENST00000479440 NCR1O76036 304 aa13.79□□□□□ -0.2
DDX56-210ENST00000479440 PRSS23O95084 383 aa13.79□□□□□ -0.2
DDX56-210ENST00000479440 PNMTP11086 282 aa13.79□□□□□ -0.2
DDX56-210ENST00000479440 CD79AP11912 226 aa13.79□□□□□ -0.2
DDX56-210ENST00000479440 ADRA2CP18825 462 aa13.79□□□□□ -0.2
DDX56-210ENST00000479440 ALDH3A1P30838 453 aa13.79□□□□□ -0.2
DDX56-210ENST00000479440 LSP1P33241 339 aa13.79□□□□□ -0.2
DDX56-210ENST00000479440 SEC24CP53992 1094 aa13.79□□□□□ -0.2
DDX56-210ENST00000479440 EMX2Q04743 252 aa13.79□□□□□ -0.2
DDX56-210ENST00000479440 SYPL1Q16563 259 aa13.79□□□□□ -0.2
DDX56-210ENST00000479440 SMU1Q2TAY7 513 aa13.79□□□□□ -0.2
DDX56-210ENST00000479440 C17orf53Q8N3J3 647 aaPredicted RBP13.79□□□□□ -0.2
DDX56-210ENST00000479440 ANKFN1Q8N957 763 aa13.79□□□□□ -0.2
DDX56-210ENST00000479440 MFSD8Q8NHS3 518 aa13.79□□□□□ -0.2
DDX56-210ENST00000479440 STK35Q8TDR2 534 aa13.79□□□□□ -0.2
DDX56-210ENST00000479440 FBXL3Q9UKT7 428 aa13.79□□□□□ -0.2
DDX56-210ENST00000479440 PPIAL4AQ9Y536 164 aa13.79□□□□□ -0.2
DDX56-210ENST00000479440 PLPP2O43688 288 aa13.78□□□□□ -0.2
DDX56-210ENST00000479440 SEC14L2O76054 403 aa13.78□□□□□ -0.2
DDX56-210ENST00000479440 HLA-HP01893 362 aa13.78□□□□□ -0.2
DDX56-210ENST00000479440 ZNF14P17017 642 aaPredicted RBP13.78□□□□□ -0.2
DDX56-210ENST00000479440 NCF2P19878 526 aaPredicted RBP13.78□□□□□ -0.2
DDX56-210ENST00000479440 ZP4Q12836 540 aa13.78□□□□□ -0.2
DDX56-210ENST00000479440 C1DQ13901 141 aaKnown RBP13.78□□□□□ -0.2
DDX56-210ENST00000479440 NKPD1Q17RQ9 610 aa13.78□□□□□ -0.2
DDX56-210ENST00000479440 DPY19L1Q2PZI1 675 aa13.78□□□□□ -0.2
DDX56-210ENST00000479440 GLIPR1L2Q4G1C9 344 aa13.78□□□□□ -0.2
DDX56-210ENST00000479440 RNF130Q86XS8 419 aa13.78□□□□□ -0.2
DDX56-210ENST00000479440 TRIML2Q8N7C3 387 aa13.78□□□□□ -0.2
DDX56-210ENST00000479440 KIF18AQ8NI77 898 aa13.78□□□□□ -0.2
DDX56-210ENST00000479440 MS4A3Q96HJ5 214 aa13.78□□□□□ -0.2
DDX56-210ENST00000479440 ZIM3Q96PE6 472 aa13.78□□□□□ -0.2
DDX56-210ENST00000479440 MECRQ9BV79 373 aa13.78□□□□□ -0.2
DDX56-210ENST00000479440 MTHFD2LQ9H903 347 aaPredicted RBP13.78□□□□□ -0.2
DDX56-210ENST00000479440 MKS1Q9NXB0 559 aa13.78□□□□□ -0.2
DDX56-210ENST00000479440 MYEF2Q9P2K5 600 aaKnown RBP13.78□□□□□ -0.2
DDX56-210ENST00000479440 SLC7A8Q9UHI5 535 aa13.78□□□□□ -0.2
DDX56-210ENST00000479440 GPR160Q9UJ42 338 aa13.78□□□□□ -0.2
DDX56-210ENST00000479440 CDHR4A6H8M9 788 aa13.77□□□□□ -0.21
DDX56-210ENST00000479440 SMIM23A6NLE4 172 aa13.77□□□□□ -0.21
DDX56-210ENST00000479440 NPIPB7O75200 414 aa13.77□□□□□ -0.21
DDX56-210ENST00000479440 RAB36O95755 333 aa13.77□□□□□ -0.21
DDX56-210ENST00000479440 GKN3PP0CG01 181 aa13.77□□□□□ -0.21
DDX56-210ENST00000479440 ARAFP10398 606 aa13.77□□□□□ -0.21
DDX56-210ENST00000479440 NR2F1P10589 423 aa13.77□□□□□ -0.21
DDX56-210ENST00000479440 NAT2P11245 290 aa13.77□□□□□ -0.21
DDX56-210ENST00000479440 ZNF35P13682 527 aa13.77□□□□□ -0.21
DDX56-210ENST00000479440 TEKQ02763 1124 aa13.77□□□□□ -0.21
DDX56-210ENST00000479440 MVKQ03426 396 aa13.77□□□□□ -0.21
DDX56-210ENST00000479440 FXNQ16595 210 aa13.77□□□□□ -0.21
DDX56-210ENST00000479440 IFT20Q8IY31 132 aa13.77□□□□□ -0.21
DDX56-210ENST00000479440 KDM8Q8N371 416 aa13.77□□□□□ -0.21
DDX56-210ENST00000479440 SNX33Q8WV41 574 aa13.77□□□□□ -0.21
DDX56-210ENST00000479440 TESCQ96BS2 214 aa13.77□□□□□ -0.21
DDX56-210ENST00000479440 SLC25A36Q96CQ1 311 aa13.77□□□□□ -0.21
DDX56-210ENST00000479440 APOPT1Q96IL0 206 aa13.77□□□□□ -0.21
DDX56-210ENST00000479440 OXGR1Q96P68 337 aa13.77□□□□□ -0.21
DDX56-210ENST00000479440 TXLNGYQ9BZA5 131 aa13.77□□□□□ -0.21
DDX56-210ENST00000479440 DENND2DQ9H6A0 471 aaPredicted RBP13.77□□□□□ -0.21
DDX56-210ENST00000479440 UNKLQ9H9P5 680 aaKnown RBP13.77□□□□□ -0.21
DDX56-210ENST00000479440 B3GAT2Q9NPZ5 323 aa13.77□□□□□ -0.21
DDX56-210ENST00000479440 B3GNT2Q9NY97 397 aa13.77□□□□□ -0.21
DDX56-210ENST00000479440 DSPPQ9NZW4 1301 aa13.77□□□□□ -0.21
DDX56-210ENST00000479440 DUSP13Q9UII6 198 aa13.77□□□□□ -0.21
DDX56-210ENST00000479440 FZR1Q9UM11 496 aa13.77□□□□□ -0.21
DDX56-210ENST00000479440 TRRAPQ9Y4A5 3859 aa13.76□□□□□ -0.21
DDX56-210ENST00000479440 CLDN25C9JDP6 229 aa13.76□□□□□ -0.21
DDX56-210ENST00000479440 FTCDNL1E5RQL4 147 aa13.76□□□□□ -0.21
DDX56-210ENST00000479440 AIM2O14862 343 aa13.76□□□□□ -0.21
DDX56-210ENST00000479440 PTDSS1P48651 473 aaKnown RBP13.76□□□□□ -0.21
DDX56-210ENST00000479440 SELENOVP59797 346 aa13.76□□□□□ -0.21
DDX56-210ENST00000479440 IL13RA1P78552 427 aa13.76□□□□□ -0.21
DDX56-210ENST00000479440 CASP8Q14790 479 aa13.76□□□□□ -0.21
DDX56-210ENST00000479440 PCGF3Q3KNV8 242 aa13.76□□□□□ -0.21
DDX56-210ENST00000479440 AVPI1Q5T686 147 aa13.76□□□□□ -0.21
DDX56-210ENST00000479440 ATG16L1Q676U5 607 aa13.76□□□□□ -0.21
DDX56-210ENST00000479440 ZNF836Q6ZNA1 936 aa13.76□□□□□ -0.21
DDX56-210ENST00000479440 LRP11Q86VZ4 500 aa13.76□□□□□ -0.21
DDX56-210ENST00000479440 SNX32Q86XE0 403 aa13.76□□□□□ -0.21
DDX56-210ENST00000479440 TREML1Q86YW5 311 aa13.76□□□□□ -0.21
DDX56-210ENST00000479440 RNF217Q8TC41 542 aa13.76□□□□□ -0.21
DDX56-210ENST00000479440 ZNF837Q96EG3 531 aaPredicted RBP13.76□□□□□ -0.21
DDX56-210ENST00000479440 OR2M2Q96R28 347 aa13.76□□□□□ -0.21
DDX56-210ENST00000479440 CACYBPQ9HB71 228 aaKnown RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms