RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 TMEM14AQ9Y6G1 99 aa9.44□□□□□ -0.9
VPS25-203ENST00000589520 SPTBP11277 2137 aa9.44□□□□□ -0.9
VPS25-203ENST00000589520 USP24Q9UPU5 2620 aa9.44□□□□□ -0.9
VPS25-203ENST00000589520 DMDP11532 3685 aa9.44□□□□□ -0.9
VPS25-203ENST00000589520 CACNA1HO95180 2353 aa9.43□□□□□ -0.9
VPS25-203ENST00000589520 CABIN1Q9Y6J0 2220 aa9.43□□□□□ -0.9
VPS25-203ENST00000589520 A0A1W2PQL4 384 aaPredicted RBP9.43□□□□□ -0.9
VPS25-203ENST00000589520 NPIPB13A6NJU9 1138 aa9.43□□□□□ -0.9
VPS25-203ENST00000589520 CENPBD1B2RD01 187 aa9.43□□□□□ -0.9
VPS25-203ENST00000589520 NPIPB4C9JG80 1138 aa9.43□□□□□ -0.9
VPS25-203ENST00000589520 GABRPO00591 440 aa9.43□□□□□ -0.9
VPS25-203ENST00000589520 XKRYO14609 159 aa9.43□□□□□ -0.9
VPS25-203ENST00000589520 OGG1O15527 345 aa9.43□□□□□ -0.9
VPS25-203ENST00000589520 SCO2O43819 266 aa9.43□□□□□ -0.9
VPS25-203ENST00000589520 PRKNO60260 465 aaPredicted RBP9.43□□□□□ -0.9
VPS25-203ENST00000589520 UPK1BO75841 260 aa9.43□□□□□ -0.9
VPS25-203ENST00000589520 GATBO75879 557 aaKnown RBP9.43□□□□□ -0.9
VPS25-203ENST00000589520 DXOO77932 396 aaKnown RBP9.43□□□□□ -0.9
VPS25-203ENST00000589520 APOL3O95236 402 aa9.43□□□□□ -0.9
VPS25-203ENST00000589520 IGHMP01871 453 aa9.43□□□□□ -0.9
VPS25-203ENST00000589520 OCM2P0CE71 109 aa9.43□□□□□ -0.9
VPS25-203ENST00000589520 OCMP0CE72 109 aaPredicted RBP9.43□□□□□ -0.9
VPS25-203ENST00000589520 ICAM2P13598 275 aa9.43□□□□□ -0.9
VPS25-203ENST00000589520 ADH6P28332 368 aa9.43□□□□□ -0.9
VPS25-203ENST00000589520 TGM4P49221 684 aa9.43□□□□□ -0.9
VPS25-203ENST00000589520 NUBP1P53384 320 aa9.43□□□□□ -0.9
VPS25-203ENST00000589520 DEFA1P59665 94 aa9.43□□□□□ -0.9
VPS25-203ENST00000589520 DEFA3P59666 94 aa9.43□□□□□ -0.9
VPS25-203ENST00000589520 ZNF85Q03923 595 aa9.43□□□□□ -0.9
VPS25-203ENST00000589520 LTBQ06643 244 aa9.43□□□□□ -0.9
VPS25-203ENST00000589520 RPL18Q07020 188 aaKnown RBP9.43□□□□□ -0.9
VPS25-203ENST00000589520 ZP4Q12836 540 aa9.43□□□□□ -0.9
VPS25-203ENST00000589520 TCF15Q12870 199 aa9.43□□□□□ -0.9
VPS25-203ENST00000589520 OXA1LQ15070 435 aa9.43□□□□□ -0.9
VPS25-203ENST00000589520 NTRK2Q16620 822 aa9.43□□□□□ -0.9
VPS25-203ENST00000589520 COL28A1Q2UY09 1125 aa9.43□□□□□ -0.9
VPS25-203ENST00000589520 TRIM16LQ309B1 348 aa9.43□□□□□ -0.9
VPS25-203ENST00000589520 C11orf91Q3C1V1 193 aa9.43□□□□□ -0.9
VPS25-203ENST00000589520 ZNF791Q3KP31 576 aaPredicted RBP9.43□□□□□ -0.9
VPS25-203ENST00000589520 CDONQ4KMG0 1287 aa9.43□□□□□ -0.9
VPS25-203ENST00000589520 DCAF12Q5T6F0 453 aa9.43□□□□□ -0.9
VPS25-203ENST00000589520 C1orf140Q5VVS0 124 aa9.43□□□□□ -0.9
VPS25-203ENST00000589520 FAM205BPQ63HN1 556 aa9.43□□□□□ -0.9
VPS25-203ENST00000589520 C22orf42Q6IC83 251 aa9.43□□□□□ -0.9
VPS25-203ENST00000589520 RPL22L1Q6P5R6 122 aaKnown RBP9.43□□□□□ -0.9
VPS25-203ENST00000589520 LEG1Q6P5S2 330 aa9.43□□□□□ -0.9
VPS25-203ENST00000589520 METAP1DQ6UB28 335 aaPredicted RBP9.43□□□□□ -0.9
VPS25-203ENST00000589520 PLEKHG7Q6ZR37 379 aa9.43□□□□□ -0.9
VPS25-203ENST00000589520 DCDC5Q6ZRR9 648 aa9.43□□□□□ -0.9
VPS25-203ENST00000589520 SLC16A9Q7RTY1 509 aa9.43□□□□□ -0.9
VPS25-203ENST00000589520 SLC35F2Q8IXU6 374 aa9.43□□□□□ -0.9
VPS25-203ENST00000589520 PARP16Q8N5Y8 322 aa9.43□□□□□ -0.9
VPS25-203ENST00000589520 TMEM99Q8N816 258 aa9.43□□□□□ -0.9
VPS25-203ENST00000589520 CYB561A3Q8NBI2 242 aa9.43□□□□□ -0.9
VPS25-203ENST00000589520 MOSPD2Q8NHP6 518 aa9.43□□□□□ -0.9
VPS25-203ENST00000589520 MFSD8Q8NHS3 518 aa9.43□□□□□ -0.9
VPS25-203ENST00000589520 SNX33Q8WV41 574 aa9.43□□□□□ -0.9
VPS25-203ENST00000589520 THAP4Q8WY91 577 aa9.43□□□□□ -0.9
VPS25-203ENST00000589520 KIAA1143Q96AT1 154 aaPredicted RBP9.43□□□□□ -0.9
VPS25-203ENST00000589520 KCTD12Q96CX2 325 aaKnown RBP9.43□□□□□ -0.9
VPS25-203ENST00000589520 DDIT4LQ96D03 193 aa9.43□□□□□ -0.9
VPS25-203ENST00000589520 KTI12Q96EK9 354 aaPredicted RBP9.43□□□□□ -0.9
VPS25-203ENST00000589520 NMNAT3Q96T66 252 aa9.43□□□□□ -0.9
VPS25-203ENST00000589520 MFRPQ9BY79 579 aa9.43□□□□□ -0.9
VPS25-203ENST00000589520 SMURF1Q9HCE7 757 aa9.43□□□□□ -0.9
VPS25-203ENST00000589520 APMAPQ9HDC9 416 aa9.43□□□□□ -0.9
VPS25-203ENST00000589520 INIPQ9NRY2 104 aa9.43□□□□□ -0.9
VPS25-203ENST00000589520 SNTG1Q9NSN8 517 aa9.43□□□□□ -0.9
VPS25-203ENST00000589520 TOR4AQ9NXH8 423 aa9.43□□□□□ -0.9
VPS25-203ENST00000589520 MRPL39Q9NYK5 338 aaKnown RBP9.43□□□□□ -0.9
VPS25-203ENST00000589520 FKBP7Q9Y680 259 aa9.43□□□□□ -0.9
VPS25-203ENST00000589520 FASNP49327 2511 aaKnown RBP9.43□□□□□ -0.9
VPS25-203ENST00000589520 TECTAO75443 2155 aa9.43□□□□□ -0.9
VPS25-203ENST00000589520 TEX13CA0A0J9YWL9 993 aa9.42□□□□□ -0.9
VPS25-203ENST00000589520 A0A1B0GVG6 124 aa9.42□□□□□ -0.9
VPS25-203ENST00000589520 TMEM72A0PK05 275 aa9.42□□□□□ -0.9
VPS25-203ENST00000589520 OR6C68A6NDL8 312 aa9.42□□□□□ -0.9
VPS25-203ENST00000589520 A6NIZ1 184 aa9.42□□□□□ -0.9
VPS25-203ENST00000589520 TMEM200CA6NKL6 621 aa9.42□□□□□ -0.9
VPS25-203ENST00000589520 LRRN3E7EW58 273 aa9.42□□□□□ -0.9
VPS25-203ENST00000589520 J3QLW9 94 aa9.42□□□□□ -0.9
VPS25-203ENST00000589520 CASKO14936 926 aa9.42□□□□□ -0.9
VPS25-203ENST00000589520 SEC14L5O43304 696 aa9.42□□□□□ -0.9
VPS25-203ENST00000589520 GPRIN2O60269 458 aa9.42□□□□□ -0.9
VPS25-203ENST00000589520 PFDN1O60925 122 aa9.42□□□□□ -0.9
VPS25-203ENST00000589520 RAB40ALP0C0E4 278 aa9.42□□□□□ -0.9
VPS25-203ENST00000589520 ZNF19P17023 458 aa9.42□□□□□ -0.9
VPS25-203ENST00000589520 SDC2P34741 201 aa9.42□□□□□ -0.9
VPS25-203ENST00000589520 EIF1P41567 113 aaKnown RBP9.42□□□□□ -0.9
VPS25-203ENST00000589520 RPS5P46782 204 aaKnown RBP9.42□□□□□ -0.9
VPS25-203ENST00000589520 FBXW4P57775 412 aa9.42□□□□□ -0.9
VPS25-203ENST00000589520 RAP1BP61224 184 aa9.42□□□□□ -0.9
VPS25-203ENST00000589520 RAP1AP62834 184 aa9.42□□□□□ -0.9
VPS25-203ENST00000589520 FABP5Q01469 135 aa9.42□□□□□ -0.9
VPS25-203ENST00000589520 DOC2BQ14184 412 aa9.42□□□□□ -0.9
VPS25-203ENST00000589520 PCOLCEQ15113 449 aa9.42□□□□□ -0.9
VPS25-203ENST00000589520 ANGPT1Q15389 498 aa9.42□□□□□ -0.9
VPS25-203ENST00000589520 PLA2G2CQ5R387 149 aa9.42□□□□□ -0.9
VPS25-203ENST00000589520 DDI2Q5TDH0 399 aa9.42□□□□□ -0.9
VPS25-203ENST00000589520 FCRLBQ6BAA4 426 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms