RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 ENPP4Q9Y6X5 453 aa20.09■□□□□ 0.81
SFSWAP-204ENST00000535399 FREM1Q5H8C1 2179 aa20.09■□□□□ 0.81
SFSWAP-204ENST00000535399 FAM221AA4D161 298 aa20.08■□□□□ 0.81
SFSWAP-204ENST00000535399 MS4A18H0YCH9 400 aa20.08■□□□□ 0.81
SFSWAP-204ENST00000535399 CH25HO95992 272 aa20.08■□□□□ 0.81
SFSWAP-204ENST00000535399 IGHV3-9P01782 118 aa20.08■□□□□ 0.81
SFSWAP-204ENST00000535399 TSC22D1Q15714 1073 aa20.08■□□□□ 0.81
SFSWAP-204ENST00000535399 MS4A18Q3C1V0 323 aa20.08■□□□□ 0.81
SFSWAP-204ENST00000535399 SFRP5Q5T4F7 317 aa20.08■□□□□ 0.81
SFSWAP-204ENST00000535399 FBXW9Q5XUX1 488 aa20.08■□□□□ 0.81
SFSWAP-204ENST00000535399 AAED1Q7RTV5 226 aa20.08■□□□□ 0.81
SFSWAP-204ENST00000535399 TMEM239Q8WW34 195 aa20.08■□□□□ 0.81
SFSWAP-204ENST00000535399 C7orf34Q96L11 122 aa20.08■□□□□ 0.81
SFSWAP-204ENST00000535399 NSMCE2Q96MF7 247 aa20.08■□□□□ 0.81
SFSWAP-204ENST00000535399 MED18Q9BUE0 208 aa20.08■□□□□ 0.81
SFSWAP-204ENST00000535399 HDHD5Q9BXW7 423 aa20.08■□□□□ 0.81
SFSWAP-204ENST00000535399 ACTR6Q9GZN1 396 aa20.08■□□□□ 0.81
SFSWAP-204ENST00000535399 OR10A4Q9H209 315 aa20.08■□□□□ 0.81
SFSWAP-204ENST00000535399 FKRPQ9H9S5 495 aa20.08■□□□□ 0.81
SFSWAP-204ENST00000535399 MAN2C1Q9NTJ4 1040 aa20.08■□□□□ 0.81
SFSWAP-204ENST00000535399 PRPF19Q9UMS4 504 aaKnown RBP20.08■□□□□ 0.81
SFSWAP-204ENST00000535399 APCP25054 2843 aa20.07■□□□□ 0.8
SFSWAP-204ENST00000535399 A6NNC1 897 aa20.07■□□□□ 0.8
SFSWAP-204ENST00000535399 PLPP3O14495 311 aa20.07■□□□□ 0.8
SFSWAP-204ENST00000535399 HPRP00739 348 aa20.07■□□□□ 0.8
SFSWAP-204ENST00000535399 MT-ND1P03886 318 aa20.07■□□□□ 0.8
SFSWAP-204ENST00000535399 COX5AP20674 150 aa20.07■□□□□ 0.8
SFSWAP-204ENST00000535399 IGHV1-2P23083 117 aa20.07■□□□□ 0.8
SFSWAP-204ENST00000535399 KRTAP10-9P60411 292 aa20.07■□□□□ 0.8
SFSWAP-204ENST00000535399 FOXD4Q12950 439 aaPredicted RBP20.07■□□□□ 0.8
SFSWAP-204ENST00000535399 ITGADQ13349 1161 aa20.07■□□□□ 0.8
SFSWAP-204ENST00000535399 PMS2P3Q13401 168 aa20.07■□□□□ 0.8
SFSWAP-204ENST00000535399 SLC46A3Q7Z3Q1 461 aa20.07■□□□□ 0.8
SFSWAP-204ENST00000535399 PFN4Q8NHR9 129 aa20.07■□□□□ 0.8
SFSWAP-204ENST00000535399 HS6ST2Q96MM7 605 aa20.07■□□□□ 0.8
SFSWAP-204ENST00000535399 FNDC11Q9BVV2 318 aa20.07■□□□□ 0.8
SFSWAP-204ENST00000535399 NDUFAF4Q9P032 175 aa20.07■□□□□ 0.8
SFSWAP-204ENST00000535399 RHCGQ9UBD6 479 aa20.07■□□□□ 0.8
SFSWAP-204ENST00000535399 MALT1Q9UDY8 824 aa20.07■□□□□ 0.8
SFSWAP-204ENST00000535399 ENO4A6NNW6 628 aa20.06■□□□□ 0.8
SFSWAP-204ENST00000535399 CTAG2O75638 210 aa20.06■□□□□ 0.8
SFSWAP-204ENST00000535399 PDE5AO76074 875 aa20.06■□□□□ 0.8
SFSWAP-204ENST00000535399 IGF2P01344 180 aa20.06■□□□□ 0.8
SFSWAP-204ENST00000535399 SEMG1P04279 462 aa20.06■□□□□ 0.8
SFSWAP-204ENST00000535399 THBDP07204 575 aa20.06■□□□□ 0.8
SFSWAP-204ENST00000535399 NQO1P15559 274 aaKnown RBP20.06■□□□□ 0.8
SFSWAP-204ENST00000535399 PPP3CBP16298 524 aa20.06■□□□□ 0.8
SFSWAP-204ENST00000535399 ZNF43P17038 809 aa20.06■□□□□ 0.8
SFSWAP-204ENST00000535399 IFNA8P32881 189 aa20.06■□□□□ 0.8
SFSWAP-204ENST00000535399 TSPO2Q5TGU0 170 aa20.06■□□□□ 0.8
SFSWAP-204ENST00000535399 NHLRC1Q6VVB1 395 aa20.06■□□□□ 0.8
SFSWAP-204ENST00000535399 UBE2J2Q8N2K1 259 aa20.06■□□□□ 0.8
SFSWAP-204ENST00000535399 LRRC17Q8N6Y2 441 aa20.06■□□□□ 0.8
SFSWAP-204ENST00000535399 STEAP2Q8NFT2 490 aa20.06■□□□□ 0.8
SFSWAP-204ENST00000535399 OR5J2Q8NH18 312 aa20.06■□□□□ 0.8
SFSWAP-204ENST00000535399 KISS1RQ969F8 398 aaPredicted RBP20.06■□□□□ 0.8
SFSWAP-204ENST00000535399 PYURFQ96I23 114 aa20.06■□□□□ 0.8
SFSWAP-204ENST00000535399 NANSQ9NR45 359 aa20.06■□□□□ 0.8
SFSWAP-204ENST00000535399 SLC7A10Q9NS82 523 aa20.06■□□□□ 0.8
SFSWAP-204ENST00000535399 V9GYQ6 96 aa20.06■□□□□ 0.8
SFSWAP-204ENST00000535399 PDLIM1O00151 329 aa20.05■□□□□ 0.8
SFSWAP-204ENST00000535399 TRAF3IP2O43734 574 aaPredicted RBP20.05■□□□□ 0.8
SFSWAP-204ENST00000535399 ASAH2BP0C7U1 165 aa20.05■□□□□ 0.8
SFSWAP-204ENST00000535399 IL32P24001 234 aa20.05■□□□□ 0.8
SFSWAP-204ENST00000535399 SELENOPP49908 381 aa20.05■□□□□ 0.8
SFSWAP-204ENST00000535399 CLDN17P56750 224 aa20.05■□□□□ 0.8
SFSWAP-204ENST00000535399 LSM11P83369 360 aaKnown RBP eCLIP20.05■□□□□ 0.8
SFSWAP-204ENST00000535399 VLDLRP98155 873 aa20.05■□□□□ 0.8
SFSWAP-204ENST00000535399 PUDPQ08623 228 aa20.05■□□□□ 0.8
SFSWAP-204ENST00000535399 TRAM2Q15035 370 aa20.05■□□□□ 0.8
SFSWAP-204ENST00000535399 IQCCQ4KMZ1 466 aa20.05■□□□□ 0.8
SFSWAP-204ENST00000535399 S100PBPQ96BU1 408 aa20.05■□□□□ 0.8
SFSWAP-204ENST00000535399 SLCO5A1Q9H2Y9 848 aa20.05■□□□□ 0.8
SFSWAP-204ENST00000535399 RASSF1Q9NS23 344 aa20.05■□□□□ 0.8
SFSWAP-204ENST00000535399 C20orf141Q9NUB4 165 aa20.05■□□□□ 0.8
SFSWAP-204ENST00000535399 ACTR3BQ9P1U1 418 aa20.05■□□□□ 0.8
SFSWAP-204ENST00000535399 ZNF229Q9UJW7 825 aa20.05■□□□□ 0.8
SFSWAP-204ENST00000535399 MED31Q9Y3C7 131 aa20.05■□□□□ 0.8
SFSWAP-204ENST00000535399 MAST4O15021 2626 aa20.04■□□□□ 0.8
SFSWAP-204ENST00000535399 CASKO14936 926 aa20.04■□□□□ 0.8
SFSWAP-204ENST00000535399 LYZL6O75951 148 aa20.04■□□□□ 0.8
SFSWAP-204ENST00000535399 OR7A10O76100 309 aa20.04■□□□□ 0.8
SFSWAP-204ENST00000535399 ZNF432O94892 652 aa20.04■□□□□ 0.8
SFSWAP-204ENST00000535399 HLA-DOBP13765 273 aa20.04■□□□□ 0.8
SFSWAP-204ENST00000535399 ATP6V1B2P21281 511 aa20.04■□□□□ 0.8
SFSWAP-204ENST00000535399 CRYGSP22914 178 aa20.04■□□□□ 0.8
SFSWAP-204ENST00000535399 FOXG1P55316 489 aaPredicted RBP20.04■□□□□ 0.8
SFSWAP-204ENST00000535399 IL1RL1Q01638 556 aa20.04■□□□□ 0.8
SFSWAP-204ENST00000535399 FAPQ12884 760 aa20.04■□□□□ 0.8
SFSWAP-204ENST00000535399 C1DQ13901 141 aaKnown RBP20.04■□□□□ 0.8
SFSWAP-204ENST00000535399 NIPAL3Q6P499 406 aa20.04■□□□□ 0.8
SFSWAP-204ENST00000535399 BHLHA15Q7RTS1 189 aaPredicted RBP20.04■□□□□ 0.8
SFSWAP-204ENST00000535399 CYP4Z1Q86W10 505 aa20.04■□□□□ 0.8
SFSWAP-204ENST00000535399 UEVLDQ8IX04 471 aa20.04■□□□□ 0.8
SFSWAP-204ENST00000535399 ZNF433Q8N7K0 673 aaPredicted RBP20.04■□□□□ 0.8
SFSWAP-204ENST00000535399 PIK3C3Q8NEB9 887 aa20.04■□□□□ 0.8
SFSWAP-204ENST00000535399 SLC7A6OSQ96CW6 309 aaPredicted RBP20.04■□□□□ 0.8
SFSWAP-204ENST00000535399 SGTBQ96EQ0 304 aa20.04■□□□□ 0.8
SFSWAP-204ENST00000535399 ZC3HAV1LQ96H79 300 aaKnown RBP20.04■□□□□ 0.8
SFSWAP-204ENST00000535399 CLPTM1LQ96KA5 538 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms