RNA–Protein interactions for RNA: ENST00000529214.5

ATPAF1-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-209ENST00000529214 RNF24Q9Y225 148 aa5.69□□□□□ -1.5
ATPAF1-209ENST00000529214 SPTA1P02549 2419 aa5.69□□□□□ -1.5
ATPAF1-209ENST00000529214 A0A096LPI6 279 aa5.68□□□□□ -1.5
ATPAF1-209ENST00000529214 SH3PXD2BA1X283 911 aa5.68□□□□□ -1.5
ATPAF1-209ENST00000529214 FAM166BA8MTA8 275 aa5.68□□□□□ -1.5
ATPAF1-209ENST00000529214 F8W036 122 aa5.68□□□□□ -1.5
ATPAF1-209ENST00000529214 hCG_2039718K7EN88 272 aa5.68□□□□□ -1.5
ATPAF1-209ENST00000529214 CLIC1O00299 241 aa5.68□□□□□ -1.5
ATPAF1-209ENST00000529214 HMGN4O00479 90 aa5.68□□□□□ -1.5
ATPAF1-209ENST00000529214 NR5A2O00482 541 aa5.68□□□□□ -1.5
ATPAF1-209ENST00000529214 TOR1AO14656 332 aa5.68□□□□□ -1.5
ATPAF1-209ENST00000529214 DENRO43583 198 aaKnown RBP5.68□□□□□ -1.5
ATPAF1-209ENST00000529214 FCMRO60667 390 aa5.68□□□□□ -1.5
ATPAF1-209ENST00000529214 PDE9AO76083 593 aa5.68□□□□□ -1.5
ATPAF1-209ENST00000529214 APOL3O95236 402 aa5.68□□□□□ -1.5
ATPAF1-209ENST00000529214 SPDEFO95238 335 aa5.68□□□□□ -1.5
ATPAF1-209ENST00000529214 AK1P00568 194 aa5.68□□□□□ -1.5
ATPAF1-209ENST00000529214 IGHG3P01860 377 aa5.68□□□□□ -1.5
ATPAF1-209ENST00000529214 TK1P04183 234 aa5.68□□□□□ -1.5
ATPAF1-209ENST00000529214 HPNP05981 417 aa5.68□□□□□ -1.5
ATPAF1-209ENST00000529214 NGFRP08138 427 aa5.68□□□□□ -1.5
ATPAF1-209ENST00000529214 GUSBP08236 651 aa5.68□□□□□ -1.5
ATPAF1-209ENST00000529214 HOXB9P17482 250 aaPredicted RBP5.68□□□□□ -1.5
ATPAF1-209ENST00000529214 DRD4P21917 467 aa5.68□□□□□ -1.5
ATPAF1-209ENST00000529214 ELAVL4P26378 380 aaKnown RBP5.68□□□□□ -1.5
ATPAF1-209ENST00000529214 UQCRFS1P47985 274 aa5.68□□□□□ -1.5
ATPAF1-209ENST00000529214 PTDSS1P48651 473 aaKnown RBP5.68□□□□□ -1.5
ATPAF1-209ENST00000529214 MVDP53602 400 aa5.68□□□□□ -1.5
ATPAF1-209ENST00000529214 TXNL4AP83876 142 aaKnown RBP5.68□□□□□ -1.5
ATPAF1-209ENST00000529214 KLF10Q13118 480 aa5.68□□□□□ -1.5
ATPAF1-209ENST00000529214 KCNJ8Q15842 424 aa5.68□□□□□ -1.5
ATPAF1-209ENST00000529214 YIF1BQ5BJH7 314 aa5.68□□□□□ -1.5
ATPAF1-209ENST00000529214 C6orf10Q5SRN2 563 aa5.68□□□□□ -1.5
ATPAF1-209ENST00000529214 DCST2Q5T1A1 773 aa5.68□□□□□ -1.5
ATPAF1-209ENST00000529214 OR5M10Q6IEU7 315 aa5.68□□□□□ -1.5
ATPAF1-209ENST00000529214 TNFAIP8L2Q6P589 184 aaPredicted RBP5.68□□□□□ -1.5
ATPAF1-209ENST00000529214 GFRALQ6UXV0 394 aa5.68□□□□□ -1.5
ATPAF1-209ENST00000529214 DLEU7Q6UYE1 221 aa5.68□□□□□ -1.5
ATPAF1-209ENST00000529214 THAP5Q7Z6K1 395 aa5.68□□□□□ -1.5
ATPAF1-209ENST00000529214 GALNT10Q86SR1 603 aa5.68□□□□□ -1.5
ATPAF1-209ENST00000529214 MARCH3Q86UD3 253 aa5.68□□□□□ -1.5
ATPAF1-209ENST00000529214 RNF130Q86XS8 419 aa5.68□□□□□ -1.5
ATPAF1-209ENST00000529214 PLCZ1Q86YW0 608 aa5.68□□□□□ -1.5
ATPAF1-209ENST00000529214 SPPL2CQ8IUH8 684 aa5.68□□□□□ -1.5
ATPAF1-209ENST00000529214 ADGRG5Q8IZF4 528 aa5.68□□□□□ -1.5
ATPAF1-209ENST00000529214 GHDCQ8N2G8 530 aa5.68□□□□□ -1.5
ATPAF1-209ENST00000529214 OR52M1Q8NGK5 317 aa5.68□□□□□ -1.5
ATPAF1-209ENST00000529214 VANGL1Q8TAA9 524 aaPredicted RBP5.68□□□□□ -1.5
ATPAF1-209ENST00000529214 DTD1Q8TEA8 209 aa5.68□□□□□ -1.5
ATPAF1-209ENST00000529214 DUSP19Q8WTR2 217 aa5.68□□□□□ -1.5
ATPAF1-209ENST00000529214 GTF3AQ92664 365 aaKnown RBP5.68□□□□□ -1.5
ATPAF1-209ENST00000529214 RAB8BQ92930 207 aa5.68□□□□□ -1.5
ATPAF1-209ENST00000529214 RNF125Q96EQ8 232 aa5.68□□□□□ -1.5
ATPAF1-209ENST00000529214 MAP6Q96JE9 813 aa5.68□□□□□ -1.5
ATPAF1-209ENST00000529214 SLC35G5Q96KT7 338 aa5.68□□□□□ -1.5
ATPAF1-209ENST00000529214 ZNF597Q96LX8 424 aa5.68□□□□□ -1.5
ATPAF1-209ENST00000529214 PSMG3-AS1Q96PY0 264 aa5.68□□□□□ -1.5
ATPAF1-209ENST00000529214 OSBPL11Q9BXB4 747 aa5.68□□□□□ -1.5
ATPAF1-209ENST00000529214 UBQLN3Q9H347 655 aa5.68□□□□□ -1.5
ATPAF1-209ENST00000529214 ZNF703Q9H7S9 590 aaPredicted RBP5.68□□□□□ -1.5
ATPAF1-209ENST00000529214 UBQLN4Q9NRR5 601 aa5.68□□□□□ -1.5
ATPAF1-209ENST00000529214 DECR2Q9NUI1 292 aa5.68□□□□□ -1.5
ATPAF1-209ENST00000529214 UFSP2Q9NUQ7 469 aa5.68□□□□□ -1.5
ATPAF1-209ENST00000529214 SLC25A37Q9NYZ2 338 aa5.68□□□□□ -1.5
ATPAF1-209ENST00000529214 KLRF1Q9NZS2 232 aa5.68□□□□□ -1.5
ATPAF1-209ENST00000529214 ABCG2Q9UNQ0 655 aa5.68□□□□□ -1.5
ATPAF1-209ENST00000529214 ZNF835Q9Y2P0 537 aa5.68□□□□□ -1.5
ATPAF1-209ENST00000529214 MRPS7Q9Y2R9 242 aaKnown RBP5.68□□□□□ -1.5
ATPAF1-209ENST00000529214 NDUFAF1Q9Y375 327 aa5.68□□□□□ -1.5
ATPAF1-209ENST00000529214 MRPS18CQ9Y3D5 142 aaKnown RBP5.68□□□□□ -1.5
ATPAF1-209ENST00000529214 WIF1Q9Y5W5 379 aa5.68□□□□□ -1.5
ATPAF1-209ENST00000529214 PRRC2CQ9Y520 2896 aaKnown RBP5.68□□□□□ -1.5
ATPAF1-209ENST00000529214 RELNP78509 3460 aa5.68□□□□□ -1.5
ATPAF1-209ENST00000529214 EML6Q6ZMW3 1958 aa5.68□□□□□ -1.5
ATPAF1-209ENST00000529214 ZNF462Q96JM2 2506 aa5.67□□□□□ -1.5
ATPAF1-209ENST00000529214 TRBV5-3A0A0A0MS03 114 aa5.67□□□□□ -1.5
ATPAF1-209ENST00000529214 A0A1B0GTH9 108 aa5.67□□□□□ -1.5
ATPAF1-209ENST00000529214 A0A1W2PQD3 144 aa5.67□□□□□ -1.5
ATPAF1-209ENST00000529214 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.67□□□□□ -1.5
ATPAF1-209ENST00000529214 B4DXG7 233 aa5.67□□□□□ -1.5
ATPAF1-209ENST00000529214 NPIPB9F8W1W9 429 aa5.67□□□□□ -1.5
ATPAF1-209ENST00000529214 WRBO00258 174 aa5.67□□□□□ -1.5
ATPAF1-209ENST00000529214 LDLRAD4O15165 306 aa5.67□□□□□ -1.5
ATPAF1-209ENST00000529214 NUPL2O15504 423 aaKnown RBP5.67□□□□□ -1.5
ATPAF1-209ENST00000529214 SCO2O43819 266 aa5.67□□□□□ -1.5
ATPAF1-209ENST00000529214 SNX3O60493 162 aa5.67□□□□□ -1.5
ATPAF1-209ENST00000529214 HCN1O60741 890 aa5.67□□□□□ -1.5
ATPAF1-209ENST00000529214 CCDC22O60826 627 aa5.67□□□□□ -1.5
ATPAF1-209ENST00000529214 STX11O75558 287 aa5.67□□□□□ -1.5
ATPAF1-209ENST00000529214 CTAG2O75638 210 aa5.67□□□□□ -1.5
ATPAF1-209ENST00000529214 GPX5O75715 221 aa5.67□□□□□ -1.5
ATPAF1-209ENST00000529214 TRAPPC6AO75865 159 aa5.67□□□□□ -1.5
ATPAF1-209ENST00000529214 CLPXO76031 633 aa5.67□□□□□ -1.5
ATPAF1-209ENST00000529214 ANGPTL1O95841 491 aa5.67□□□□□ -1.5
ATPAF1-209ENST00000529214 PNPP00491 289 aa5.67□□□□□ -1.5
ATPAF1-209ENST00000529214 MBP02144 154 aa5.67□□□□□ -1.5
ATPAF1-209ENST00000529214 MT-ND5P03915 603 aa5.67□□□□□ -1.5
ATPAF1-209ENST00000529214 STSP08842 583 aa5.67□□□□□ -1.5
ATPAF1-209ENST00000529214 HK1P19367 917 aa5.67□□□□□ -1.5
ATPAF1-209ENST00000529214 GDF1P27539 372 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms