RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 MPP4Q96JB8 637 aa11.38□□□□□ -0.59
COL5A1-206ENST00000465877 PRRC1Q96M27 445 aa11.38□□□□□ -0.59
COL5A1-206ENST00000465877 ALKBH3Q96Q83 286 aaPredicted RBP11.38□□□□□ -0.59
COL5A1-206ENST00000465877 HS3ST6Q96QI5 342 aa11.38□□□□□ -0.59
COL5A1-206ENST00000465877 PRSS27Q9BQR3 290 aa11.38□□□□□ -0.59
COL5A1-206ENST00000465877 SLC7A10Q9NS82 523 aa11.38□□□□□ -0.59
COL5A1-206ENST00000465877 PARPBPQ9NWS1 579 aa11.38□□□□□ -0.59
COL5A1-206ENST00000465877 TAS2R16Q9NYV7 291 aa11.38□□□□□ -0.59
COL5A1-206ENST00000465877 ADA2Q9NZK5 511 aa11.38□□□□□ -0.59
COL5A1-206ENST00000465877 ZNF469Q96JG9 3925 aaPredicted RBP11.38□□□□□ -0.59
COL5A1-206ENST00000465877 PDLIM1O00151 329 aa11.37□□□□□ -0.59
COL5A1-206ENST00000465877 TRAF3IP2O43734 574 aaPredicted RBP11.37□□□□□ -0.59
COL5A1-206ENST00000465877 MT-ATP6P00846 226 aa11.37□□□□□ -0.59
COL5A1-206ENST00000465877 SERPINA1P01009 418 aa11.37□□□□□ -0.59
COL5A1-206ENST00000465877 IFNW1P05000 195 aa11.37□□□□□ -0.59
COL5A1-206ENST00000465877 ZNF43P17038 809 aa11.37□□□□□ -0.59
COL5A1-206ENST00000465877 GGT1P19440 569 aa11.37□□□□□ -0.59
COL5A1-206ENST00000465877 FOXG1P55316 489 aaPredicted RBP11.37□□□□□ -0.59
COL5A1-206ENST00000465877 CLDN17P56750 224 aa11.37□□□□□ -0.59
COL5A1-206ENST00000465877 IL1RL1Q01638 556 aa11.37□□□□□ -0.59
COL5A1-206ENST00000465877 BEX5Q5H9J7 111 aa11.37□□□□□ -0.59
COL5A1-206ENST00000465877 NIPAL3Q6P499 406 aa11.37□□□□□ -0.59
COL5A1-206ENST00000465877 TTC33Q6PID6 262 aaPredicted RBP11.37□□□□□ -0.59
COL5A1-206ENST00000465877 SEZ6L2Q6UXD5 910 aa11.37□□□□□ -0.59
COL5A1-206ENST00000465877 CBLL1Q75N03 491 aa11.37□□□□□ -0.59
COL5A1-206ENST00000465877 EPHX4Q8IUS5 362 aa11.37□□□□□ -0.59
COL5A1-206ENST00000465877 FITM2Q8N6M3 262 aa11.37□□□□□ -0.59
COL5A1-206ENST00000465877 C10orf53Q8N6V4 93 aa11.37□□□□□ -0.59
COL5A1-206ENST00000465877 RNF148Q8N7C7 305 aa11.37□□□□□ -0.59
COL5A1-206ENST00000465877 ZNF433Q8N7K0 673 aaPredicted RBP11.37□□□□□ -0.59
COL5A1-206ENST00000465877 CCDC197Q8NCU1 140 aa11.37□□□□□ -0.59
COL5A1-206ENST00000465877 GEMIN6Q8WXD5 167 aaKnown RBP11.37□□□□□ -0.59
COL5A1-206ENST00000465877 HSH2DQ96JZ2 352 aa11.37□□□□□ -0.59
COL5A1-206ENST00000465877 USB1Q9BQ65 265 aaKnown RBP11.37□□□□□ -0.59
COL5A1-206ENST00000465877 ASPNQ9BXN1 380 aa11.37□□□□□ -0.59
COL5A1-206ENST00000465877 SLC19A3Q9BZV2 496 aa11.37□□□□□ -0.59
COL5A1-206ENST00000465877 LIME1Q9H400 295 aa11.37□□□□□ -0.59
COL5A1-206ENST00000465877 PLEKHF2Q9H8W4 249 aa11.37□□□□□ -0.59
COL5A1-206ENST00000465877 MRPL39Q9NYK5 338 aaKnown RBP11.37□□□□□ -0.59
COL5A1-206ENST00000465877 UPB1Q9UBR1 384 aa11.37□□□□□ -0.59
COL5A1-206ENST00000465877 EGFL7Q9UHF1 273 aa11.37□□□□□ -0.59
COL5A1-206ENST00000465877 ST6GALNAC2Q9UJ37 374 aa11.37□□□□□ -0.59
COL5A1-206ENST00000465877 RCE1Q9Y256 329 aa11.37□□□□□ -0.59
COL5A1-206ENST00000465877 OR5H1A6NKK0 313 aa11.36□□□□□ -0.59
COL5A1-206ENST00000465877 ENO4A6NNW6 628 aa11.36□□□□□ -0.59
COL5A1-206ENST00000465877 AKAP8O43823 692 aaKnown RBP11.36□□□□□ -0.59
COL5A1-206ENST00000465877 HPRP00739 348 aa11.36□□□□□ -0.59
COL5A1-206ENST00000465877 RBM34P42696 430 aaKnown RBP11.36□□□□□ -0.59
COL5A1-206ENST00000465877 UGT2B15P54855 530 aa11.36□□□□□ -0.59
COL5A1-206ENST00000465877 NR1H2P55055 460 aa11.36□□□□□ -0.59
COL5A1-206ENST00000465877 MXRA7P84157 204 aa11.36□□□□□ -0.59
COL5A1-206ENST00000465877 SLC25A3Q00325 362 aa11.36□□□□□ -0.59
COL5A1-206ENST00000465877 POU3F1Q03052 451 aaPredicted RBP11.36□□□□□ -0.59
COL5A1-206ENST00000465877 PUDPQ08623 228 aa11.36□□□□□ -0.59
COL5A1-206ENST00000465877 PIN1Q13526 163 aaPredicted RBP11.36□□□□□ -0.59
COL5A1-206ENST00000465877 PPA1Q15181 289 aa11.36□□□□□ -0.59
COL5A1-206ENST00000465877 ZNF74Q16587 644 aa11.36□□□□□ -0.59
COL5A1-206ENST00000465877 IFI44LQ53G44 452 aa11.36□□□□□ -0.59
COL5A1-206ENST00000465877 TIMM23BQ5SRD1 257 aa11.36□□□□□ -0.59
COL5A1-206ENST00000465877 C9orf135Q5VTT2 229 aa11.36□□□□□ -0.59
COL5A1-206ENST00000465877 ALKBH2Q6NS38 261 aa11.36□□□□□ -0.59
COL5A1-206ENST00000465877 H1FNTQ75WM6 255 aaPredicted RBP11.36□□□□□ -0.59
COL5A1-206ENST00000465877 NKAIN4Q8IVV8 208 aa11.36□□□□□ -0.59
COL5A1-206ENST00000465877 UEVLDQ8IX04 471 aa11.36□□□□□ -0.59
COL5A1-206ENST00000465877 OFCC1Q8IZS5 231 aa11.36□□□□□ -0.59
COL5A1-206ENST00000465877 POMGNT2Q8NAT1 580 aa11.36□□□□□ -0.59
COL5A1-206ENST00000465877 FAM156AQ8NDB6 213 aa11.36□□□□□ -0.59
COL5A1-206ENST00000465877 RBM15BQ8NDT2 890 aaKnown RBP11.36□□□□□ -0.59
COL5A1-206ENST00000465877 OR5J2Q8NH18 312 aa11.36□□□□□ -0.59
COL5A1-206ENST00000465877 TMEM255BQ8WV15 326 aa11.36□□□□□ -0.59
COL5A1-206ENST00000465877 HSD17B8Q92506 261 aa11.36□□□□□ -0.59
COL5A1-206ENST00000465877 NINJ1Q92982 152 aa11.36□□□□□ -0.59
COL5A1-206ENST00000465877 PLPPR2Q96GM1 343 aa11.36□□□□□ -0.59
COL5A1-206ENST00000465877 OXGR1Q96P68 337 aa11.36□□□□□ -0.59
COL5A1-206ENST00000465877 AMBRA1Q9C0C7 1298 aa11.36□□□□□ -0.59
COL5A1-206ENST00000465877 FKRPQ9H9S5 495 aa11.36□□□□□ -0.59
COL5A1-206ENST00000465877 MEPEQ9NQ76 525 aaPredicted RBP11.36□□□□□ -0.59
COL5A1-206ENST00000465877 NDE1Q9NXR1 346 aa11.36□□□□□ -0.59
COL5A1-206ENST00000465877 A4GNTQ9UNA3 340 aa11.36□□□□□ -0.59
COL5A1-206ENST00000465877 PLEKHA6Q9Y2H5 1048 aa11.36□□□□□ -0.59
COL5A1-206ENST00000465877 DSCAMO60469 2012 aa11.35□□□□□ -0.59
COL5A1-206ENST00000465877 CIB4A0PJX0 185 aa11.35□□□□□ -0.59
COL5A1-206ENST00000465877 ZNF587BE7ETH6 402 aa11.35□□□□□ -0.59
COL5A1-206ENST00000465877 KLF4O43474 513 aa11.35□□□□□ -0.59
COL5A1-206ENST00000465877 ZNF432O94892 652 aa11.35□□□□□ -0.59
COL5A1-206ENST00000465877 THRBP10828 461 aa11.35□□□□□ -0.59
COL5A1-206ENST00000465877 HSD17B1P14061 328 aa11.35□□□□□ -0.59
COL5A1-206ENST00000465877 LGALS3BPQ08380 585 aa11.35□□□□□ -0.59
COL5A1-206ENST00000465877 C1DQ13901 141 aaKnown RBP11.35□□□□□ -0.59
COL5A1-206ENST00000465877 KRT72Q14CN4 511 aa11.35□□□□□ -0.59
COL5A1-206ENST00000465877 FXNQ16595 210 aa11.35□□□□□ -0.59
COL5A1-206ENST00000465877 C16orf89Q6UX73 402 aa11.35□□□□□ -0.59
COL5A1-206ENST00000465877 SLC46A3Q7Z3Q1 461 aa11.35□□□□□ -0.59
COL5A1-206ENST00000465877 ABHD12BQ7Z5M8 362 aaPredicted RBP11.35□□□□□ -0.59
COL5A1-206ENST00000465877 C1orf162Q8NEQ5 155 aaPredicted RBP11.35□□□□□ -0.59
COL5A1-206ENST00000465877 PFN4Q8NHR9 129 aa11.35□□□□□ -0.59
COL5A1-206ENST00000465877 TMEM239Q8WW34 195 aa11.35□□□□□ -0.59
COL5A1-206ENST00000465877 UBTD1Q9HAC8 227 aa11.35□□□□□ -0.59
COL5A1-206ENST00000465877 NGBQ9NPG2 151 aa11.35□□□□□ -0.59
COL5A1-206ENST00000465877 NANSQ9NR45 359 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 142 ms