RNA–Protein interactions for RNA: ENST00000409025.5

USP39-202, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5 BASIC

Gene USP39, Length 1,946 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-202ENST00000409025 IGLV3-32A0A0A0MS00 114 aa17.16■□□□□ 0.34
USP39-202ENST00000409025 NSG1A0A0A6YYJ2 146 aa17.16■□□□□ 0.34
USP39-202ENST00000409025 A0A1W2PQL4 384 aaPredicted RBP17.16■□□□□ 0.34
USP39-202ENST00000409025 GLCEO94923 617 aa17.16■□□□□ 0.34
USP39-202ENST00000409025 HLA-DPB1P04440 258 aa17.16■□□□□ 0.34
USP39-202ENST00000409025 CELA2AP08217 269 aa17.16■□□□□ 0.34
USP39-202ENST00000409025 FGF9P31371 208 aaPredicted RBP17.16■□□□□ 0.34
USP39-202ENST00000409025 DLX5P56178 289 aa17.16■□□□□ 0.34
USP39-202ENST00000409025 FABP5Q01469 135 aa17.16■□□□□ 0.34
USP39-202ENST00000409025 KRR1Q13601 381 aaKnown RBP17.16■□□□□ 0.34
USP39-202ENST00000409025 OR11G2Q8NGC1 345 aa17.16■□□□□ 0.34
USP39-202ENST00000409025 LIN37Q96GY3 246 aaPredicted RBP17.16■□□□□ 0.34
USP39-202ENST00000409025 CDC6Q99741 560 aa17.16■□□□□ 0.34
USP39-202ENST00000409025 OR11A1Q9GZK7 315 aa17.16■□□□□ 0.34
USP39-202ENST00000409025 TMEM9BQ9NQ34 198 aa17.16■□□□□ 0.34
USP39-202ENST00000409025 RPRD1BQ9NQG5 326 aaKnown RBP17.16■□□□□ 0.34
USP39-202ENST00000409025 TAS2R5Q9NYW4 299 aa17.16■□□□□ 0.34
USP39-202ENST00000409025 VDAC3Q9Y277 283 aa17.16■□□□□ 0.34
USP39-202ENST00000409025 PEX16Q9Y5Y5 336 aa17.16■□□□□ 0.34
USP39-202ENST00000409025 BDP1A6H8Y1 2624 aa17.16■□□□□ 0.34
USP39-202ENST00000409025 MUC3AQ02505 3323 aa17.16■□□□□ 0.34
USP39-202ENST00000409025 B4DXG7 233 aa17.15■□□□□ 0.34
USP39-202ENST00000409025 LRRTM2O43300 516 aa17.15■□□□□ 0.34
USP39-202ENST00000409025 CDRT1O95170 752 aa17.15■□□□□ 0.34
USP39-202ENST00000409025 IL1AP01583 271 aa17.15■□□□□ 0.34
USP39-202ENST00000409025 CASP3P42574 277 aa17.15■□□□□ 0.34
USP39-202ENST00000409025 RORCP51449 518 aa17.15■□□□□ 0.34
USP39-202ENST00000409025 ZNF41P51814 821 aaPredicted RBP17.15■□□□□ 0.34
USP39-202ENST00000409025 ARSKQ6UWY0 536 aa17.15■□□□□ 0.34
USP39-202ENST00000409025 SLC35F2Q8IXU6 374 aa17.15■□□□□ 0.34
USP39-202ENST00000409025 OR6K6Q8NGW6 343 aa17.15■□□□□ 0.34
USP39-202ENST00000409025 OR6S1Q8NH40 331 aa17.15■□□□□ 0.34
USP39-202ENST00000409025 SMAP2Q8WU79 429 aaPredicted RBP17.15■□□□□ 0.34
USP39-202ENST00000409025 C4orf36Q96KX1 117 aa17.15■□□□□ 0.34
USP39-202ENST00000409025 TMED9Q9BVK6 235 aa17.15■□□□□ 0.34
USP39-202ENST00000409025 INIPQ9NRY2 104 aa17.15■□□□□ 0.34
USP39-202ENST00000409025 SNTG1Q9NSN8 517 aa17.15■□□□□ 0.34
USP39-202ENST00000409025 ZNF346Q9UL40 294 aaKnown RBP17.15■□□□□ 0.34
USP39-202ENST00000409025 MOKQ9UQ07 419 aa17.15■□□□□ 0.34
USP39-202ENST00000409025 B3GNT3Q9Y2A9 372 aa17.15■□□□□ 0.34
USP39-202ENST00000409025 C11orf98E9PRG8 122 aa17.15■□□□□ 0.34
USP39-202ENST00000409025 J3QLW9 94 aa17.15■□□□□ 0.34
USP39-202ENST00000409025 OR6A2O95222 327 aa17.15■□□□□ 0.34
USP39-202ENST00000409025 RENP00797 406 aa17.15■□□□□ 0.34
USP39-202ENST00000409025 TFP02787 698 aa17.15■□□□□ 0.34
USP39-202ENST00000409025 ZNF19P17023 458 aa17.15■□□□□ 0.34
USP39-202ENST00000409025 GRPRP30550 384 aa17.15■□□□□ 0.34
USP39-202ENST00000409025 NAA10P41227 235 aaPredicted RBP17.15■□□□□ 0.34
USP39-202ENST00000409025 TAS2R43P59537 309 aa17.15■□□□□ 0.34
USP39-202ENST00000409025 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.15■□□□□ 0.346e-7■□□□□ 9.1
USP39-202ENST00000409025 OPN5Q6U736 354 aa17.15■□□□□ 0.34
USP39-202ENST00000409025 ZNRF4Q8WWF5 429 aa17.15■□□□□ 0.34
USP39-202ENST00000409025 CRNNQ9UBG3 495 aaPredicted RBP17.15■□□□□ 0.34
USP39-202ENST00000409025 SPEGQ15772 3267 aa17.14■□□□□ 0.34
USP39-202ENST00000409025 A0A075B6Q4 140 aa17.14■□□□□ 0.33
USP39-202ENST00000409025 A0A1W2PQ72 361 aa17.14■□□□□ 0.33
USP39-202ENST00000409025 RNF13O43567 381 aa17.14■□□□□ 0.33
USP39-202ENST00000409025 DXOO77932 396 aaKnown RBP17.14■□□□□ 0.33
USP39-202ENST00000409025 TCN2P20062 427 aa17.14■□□□□ 0.33
USP39-202ENST00000409025 CLDN6P56747 220 aa17.14■□□□□ 0.33
USP39-202ENST00000409025 ACTA2P62736 377 aa17.14■□□□□ 0.33
USP39-202ENST00000409025 ACTG2P63267 376 aa17.14■□□□□ 0.33
USP39-202ENST00000409025 MESTQ5EB52 335 aa17.14■□□□□ 0.33
USP39-202ENST00000409025 CDCP2Q5VXM1 449 aa17.14■□□□□ 0.33
USP39-202ENST00000409025 VASH1Q7L8A9 365 aaPredicted RBP17.14■□□□□ 0.33
USP39-202ENST00000409025 MED18Q9BUE0 208 aa17.14■□□□□ 0.33
USP39-202ENST00000409025 ALG12Q9BV10 488 aa17.14■□□□□ 0.33
USP39-202ENST00000409025 ZNF160Q9HCG1 818 aa17.14■□□□□ 0.33
USP39-202ENST00000409025 CPNE5Q9HCH3 593 aa17.14■□□□□ 0.33
USP39-202ENST00000409025 GALNT8Q9NY28 637 aa17.14■□□□□ 0.33
USP39-202ENST00000409025 PMS2P1A4D2B8 440 aa17.13■□□□□ 0.33
USP39-202ENST00000409025 C4orf47A7E2U8 309 aa17.13■□□□□ 0.33
USP39-202ENST00000409025 ETV2O00321 342 aaPredicted RBP17.13■□□□□ 0.33
USP39-202ENST00000409025 ZNF208O43345 1280 aa17.13■□□□□ 0.33
USP39-202ENST00000409025 DLGAP3O95886 979 aa17.13■□□□□ 0.33
USP39-202ENST00000409025 RAB40ALP0C0E4 278 aa17.13■□□□□ 0.33
USP39-202ENST00000409025 GALP22466 123 aa17.13■□□□□ 0.33
USP39-202ENST00000409025 AHCYP23526 432 aa17.13■□□□□ 0.33
USP39-202ENST00000409025 HCCSP53701 268 aa17.13■□□□□ 0.33
USP39-202ENST00000409025 OR12D2P58182 307 aa17.13■□□□□ 0.33
USP39-202ENST00000409025 FOXF1Q12946 379 aa17.13■□□□□ 0.33
USP39-202ENST00000409025 TBC1D25Q3MII6 688 aa17.13■□□□□ 0.33
USP39-202ENST00000409025 ARIH2OSQ8N7S6 290 aa17.13■□□□□ 0.33
USP39-202ENST00000409025 EXD3Q8N9H8 876 aa17.13■□□□□ 0.33
USP39-202ENST00000409025 CT55Q8WUE5 264 aa17.13■□□□□ 0.33
USP39-202ENST00000409025 DDIT4LQ96D03 193 aa17.13■□□□□ 0.33
USP39-202ENST00000409025 MRPL48Q96GC5 212 aaKnown RBP17.13■□□□□ 0.33
USP39-202ENST00000409025 MRGPRX4Q96LA9 322 aa17.13■□□□□ 0.33
USP39-202ENST00000409025 NPAS1Q99742 590 aa17.13■□□□□ 0.33
USP39-202ENST00000409025 KCNS3Q9BQ31 491 aa17.13■□□□□ 0.33
USP39-202ENST00000409025 MRPL39Q9NYK5 338 aaKnown RBP17.13■□□□□ 0.33
USP39-202ENST00000409025 TCFL5Q9UL49 500 aa17.13■□□□□ 0.33
USP39-202ENST00000409025 ZMIZ1Q9ULJ6 1067 aa17.13■□□□□ 0.33
USP39-202ENST00000409025 GABRPO00591 440 aa17.13■□□□□ 0.33
USP39-202ENST00000409025 SELENOFO60613 162 aa17.13■□□□□ 0.33
USP39-202ENST00000409025 PYCR1P32322 319 aa17.13■□□□□ 0.33
USP39-202ENST00000409025 MAP2K6P52564 334 aa17.13■□□□□ 0.33
USP39-202ENST00000409025 MXD1Q05195 221 aa17.13■□□□□ 0.33
USP39-202ENST00000409025 RUNX1T1Q06455 604 aa17.13■□□□□ 0.33
USP39-202ENST00000409025 SNTA1Q13424 505 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms