RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 CD8BP10966 210 aa9.53□□□□□ -0.88
POLR2J3-201ENST00000379340 ABCD3P28288 659 aa9.53□□□□□ -0.88
POLR2J3-201ENST00000379340 MPLP40238 635 aa9.53□□□□□ -0.88
POLR2J3-201ENST00000379340 HTR3AP46098 478 aa9.53□□□□□ -0.88
POLR2J3-201ENST00000379340 EGR4Q05215 589 aa9.53□□□□□ -0.88
POLR2J3-201ENST00000379340 RIN1Q13671 783 aa9.53□□□□□ -0.88
POLR2J3-201ENST00000379340 ZNF79Q15937 498 aa9.53□□□□□ -0.88
POLR2J3-201ENST00000379340 HBMQ6B0K9 141 aa9.53□□□□□ -0.88
POLR2J3-201ENST00000379340 ARL9Q6T311 187 aa9.53□□□□□ -0.88
POLR2J3-201ENST00000379340 ZNF574Q6ZN55 896 aaPredicted RBP9.53□□□□□ -0.88
POLR2J3-201ENST00000379340 FAM122BQ7Z309 247 aa9.53□□□□□ -0.88
POLR2J3-201ENST00000379340 PRR22Q8IZ63 422 aa9.53□□□□□ -0.88
POLR2J3-201ENST00000379340 NUBPLQ8TB37 319 aa9.53□□□□□ -0.88
POLR2J3-201ENST00000379340 METTL21AQ8WXB1 218 aa9.53□□□□□ -0.88
POLR2J3-201ENST00000379340 ZCCHC14Q8WYQ9 949 aaKnown RBP9.53□□□□□ -0.88
POLR2J3-201ENST00000379340 PHYHIPQ92561 330 aa9.53□□□□□ -0.88
POLR2J3-201ENST00000379340 ZMYND19Q96E35 227 aaPredicted RBP9.53□□□□□ -0.88
POLR2J3-201ENST00000379340 SNX18Q96RF0 628 aa9.53□□□□□ -0.88
POLR2J3-201ENST00000379340 MNTQ99583 582 aa9.53□□□□□ -0.88
POLR2J3-201ENST00000379340 ATF6BQ99941 703 aa9.53□□□□□ -0.88
POLR2J3-201ENST00000379340 LRRN3Q9H3W5 708 aa9.53□□□□□ -0.88
POLR2J3-201ENST00000379340 POLE4Q9NR33 117 aa9.53□□□□□ -0.88
POLR2J3-201ENST00000379340 CTSFQ9UBX1 484 aa9.53□□□□□ -0.88
POLR2J3-201ENST00000379340 FBXL4Q9UKA2 621 aa9.53□□□□□ -0.88
POLR2J3-201ENST00000379340 ADAM18Q9Y3Q7 739 aa9.53□□□□□ -0.88
POLR2J3-201ENST00000379340 GRIP1Q9Y3R0 1128 aa9.53□□□□□ -0.88
POLR2J3-201ENST00000379340 DMXL2Q8TDJ6 3036 aa9.52□□□□□ -0.88
POLR2J3-201ENST00000379340 LY6G6EA0A0G2JKS1 128 aa9.52□□□□□ -0.89
POLR2J3-201ENST00000379340 TEX13CA0A0J9YWL9 993 aa9.52□□□□□ -0.89
POLR2J3-201ENST00000379340 CPED1A4D0V7 1026 aa9.52□□□□□ -0.89
POLR2J3-201ENST00000379340 ANKRD61A6NGH8 418 aa9.52□□□□□ -0.89
POLR2J3-201ENST00000379340 LRRN3E7EW58 273 aa9.52□□□□□ -0.89
POLR2J3-201ENST00000379340 BLOC1S5-TXNDC5H3BN57 136 aa9.52□□□□□ -0.89
POLR2J3-201ENST00000379340 LRRTM2O43300 516 aa9.52□□□□□ -0.89
POLR2J3-201ENST00000379340 SEC14L5O43304 696 aa9.52□□□□□ -0.89
POLR2J3-201ENST00000379340 SIGLEC6O43699 453 aa9.52□□□□□ -0.89
POLR2J3-201ENST00000379340 GPRIN2O60269 458 aa9.52□□□□□ -0.89
POLR2J3-201ENST00000379340 ALOX12BO75342 701 aa9.52□□□□□ -0.89
POLR2J3-201ENST00000379340 SCRG1O75711 98 aa9.52□□□□□ -0.89
POLR2J3-201ENST00000379340 SLC25A12O75746 678 aa9.52□□□□□ -0.89
POLR2J3-201ENST00000379340 SC5DO75845 299 aa9.52□□□□□ -0.89
POLR2J3-201ENST00000379340 GATBO75879 557 aaKnown RBP9.52□□□□□ -0.89
POLR2J3-201ENST00000379340 TFP02787 698 aa9.52□□□□□ -0.89
POLR2J3-201ENST00000379340 BGLAPP02818 100 aa9.52□□□□□ -0.89
POLR2J3-201ENST00000379340 GYPBP06028 91 aa9.52□□□□□ -0.89
POLR2J3-201ENST00000379340 IL7P13232 177 aa9.52□□□□□ -0.89
POLR2J3-201ENST00000379340 MYF5P13349 255 aa9.52□□□□□ -0.89
POLR2J3-201ENST00000379340 NAGAP17050 411 aa9.52□□□□□ -0.89
POLR2J3-201ENST00000379340 MST1P26927 711 aa9.52□□□□□ -0.89
POLR2J3-201ENST00000379340 EVI2BP34910 448 aa9.52□□□□□ -0.89
POLR2J3-201ENST00000379340 HOXD12P35452 270 aa9.52□□□□□ -0.89
POLR2J3-201ENST00000379340 AQP2P41181 271 aa9.52□□□□□ -0.89
POLR2J3-201ENST00000379340 POLR2HP52434 150 aaKnown RBP9.52□□□□□ -0.89
POLR2J3-201ENST00000379340 SUMO3P55854 103 aaPredicted RBP9.52□□□□□ -0.89
POLR2J3-201ENST00000379340 OR12D2P58182 307 aa9.52□□□□□ -0.89
POLR2J3-201ENST00000379340 SLC26A5P58743 744 aa9.52□□□□□ -0.89
POLR2J3-201ENST00000379340 CTXN1P60606 82 aa9.52□□□□□ -0.89
POLR2J3-201ENST00000379340 ERVK-25P63136 954 aa9.52□□□□□ -0.89
POLR2J3-201ENST00000379340 RNF4P78317 190 aa9.52□□□□□ -0.89
POLR2J3-201ENST00000379340 CCL7P80098 99 aa9.52□□□□□ -0.89
POLR2J3-201ENST00000379340 DCDP81605 110 aaKnown RBP9.52□□□□□ -0.89
POLR2J3-201ENST00000379340 CDK5R1Q15078 307 aa9.52□□□□□ -0.89
POLR2J3-201ENST00000379340 HLA-BQ31612 363 aa9.52□□□□□ -0.89
POLR2J3-201ENST00000379340 NKAIN1Q4KMZ8 207 aa9.52□□□□□ -0.89
POLR2J3-201ENST00000379340 SLC6A19Q695T7 634 aa9.52□□□□□ -0.89
POLR2J3-201ENST00000379340 GUSBP11Q6P575 273 aa9.52□□□□□ -0.89
POLR2J3-201ENST00000379340 RPL22L1Q6P5R6 122 aaKnown RBP9.52□□□□□ -0.89
POLR2J3-201ENST00000379340 LEG1Q6P5S2 330 aa9.52□□□□□ -0.89
POLR2J3-201ENST00000379340 MAMDC2Q7Z304 686 aaPredicted RBP9.52□□□□□ -0.89
POLR2J3-201ENST00000379340 ANKRD37Q7Z713 158 aa9.52□□□□□ -0.89
POLR2J3-201ENST00000379340 PXKQ7Z7A4 578 aa9.52□□□□□ -0.89
POLR2J3-201ENST00000379340 PRSS58Q8IYP2 241 aa9.52□□□□□ -0.89
POLR2J3-201ENST00000379340 CADM3Q8N126 398 aa9.52□□□□□ -0.89
POLR2J3-201ENST00000379340 LSM14AQ8ND56 463 aaKnown RBP9.52□□□□□ -0.89
POLR2J3-201ENST00000379340 OR6S1Q8NH40 331 aa9.52□□□□□ -0.89
POLR2J3-201ENST00000379340 OR8K3Q8NH51 312 aa9.52□□□□□ -0.89
POLR2J3-201ENST00000379340 MOSPD2Q8NHP6 518 aa9.52□□□□□ -0.89
POLR2J3-201ENST00000379340 ABHD4Q8TB40 342 aa9.52□□□□□ -0.89
POLR2J3-201ENST00000379340 CHAC2Q8WUX2 184 aa9.52□□□□□ -0.89
POLR2J3-201ENST00000379340 SNX33Q8WV41 574 aa9.52□□□□□ -0.89
POLR2J3-201ENST00000379340 HTRA1Q92743 480 aa9.52□□□□□ -0.89
POLR2J3-201ENST00000379340 PGLYRP3Q96LB9 341 aa9.52□□□□□ -0.89
POLR2J3-201ENST00000379340 OR6C1Q96RD1 312 aa9.52□□□□□ -0.89
POLR2J3-201ENST00000379340 DCLRE1CQ96SD1 692 aaKnown RBP9.52□□□□□ -0.89
POLR2J3-201ENST00000379340 NMNAT3Q96T66 252 aa9.52□□□□□ -0.89
POLR2J3-201ENST00000379340 TTYH2Q9BSA4 534 aa9.52□□□□□ -0.89
POLR2J3-201ENST00000379340 MFRPQ9BY79 579 aa9.52□□□□□ -0.89
POLR2J3-201ENST00000379340 KLHL1Q9NR64 748 aa9.52□□□□□ -0.89
POLR2J3-201ENST00000379340 SLC22A11Q9NSA0 550 aa9.52□□□□□ -0.89
POLR2J3-201ENST00000379340 ST6GALNAC2Q9UJ37 374 aa9.52□□□□□ -0.89
POLR2J3-201ENST00000379340 ATXN7L1Q9ULK2 861 aaPredicted RBP9.52□□□□□ -0.89
POLR2J3-201ENST00000379340 SIRT4Q9Y6E7 314 aaPredicted RBP9.52□□□□□ -0.89
POLR2J3-201ENST00000379340 U3KQA8 63 aa9.52□□□□□ -0.89
POLR2J3-201ENST00000379340 FER1L5A0AVI2 2057 aa9.52□□□□□ -0.89
POLR2J3-201ENST00000379340 TRAV1-2A0A0B4J238 106 aa9.51□□□□□ -0.89
POLR2J3-201ENST00000379340 IGHV5-10-1A0A0J9YXX1 117 aa9.51□□□□□ -0.89
POLR2J3-201ENST00000379340 A0A1W2PQM1 296 aa9.51□□□□□ -0.89
POLR2J3-201ENST00000379340 OR6C68A6NDL8 312 aa9.51□□□□□ -0.89
POLR2J3-201ENST00000379340 HSPB2A8KAH6 182 aa9.51□□□□□ -0.89
POLR2J3-201ENST00000379340 PRKNO60260 465 aaPredicted RBP9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 174.3 ms