RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 ZFHX2Q9C0A1 2572 aaPredicted RBP15.95■□□□□ 0.14
SHKBP1-224ENST00000600718 G3V3Y1 287 aa15.95■□□□□ 0.14
SHKBP1-224ENST00000600718 EFNA2O43921 213 aa15.95■□□□□ 0.14
SHKBP1-224ENST00000600718 CD14P08571 375 aa15.95■□□□□ 0.14
SHKBP1-224ENST00000600718 ZNF3P17036 446 aa15.95■□□□□ 0.14
SHKBP1-224ENST00000600718 CNR1P21554 472 aa15.95■□□□□ 0.14
SHKBP1-224ENST00000600718 SDHBP21912 280 aa15.95■□□□□ 0.14
SHKBP1-224ENST00000600718 DPP4P27487 766 aa15.95■□□□□ 0.14
SHKBP1-224ENST00000600718 MAP2K4P45985 399 aa15.95■□□□□ 0.14
SHKBP1-224ENST00000600718 ITGADQ13349 1161 aa15.95■□□□□ 0.14
SHKBP1-224ENST00000600718 TUBA3CQ13748 450 aa15.95■□□□□ 0.14
SHKBP1-224ENST00000600718 RAB39AQ14964 217 aa15.95■□□□□ 0.14
SHKBP1-224ENST00000600718 GXYLT1Q4G148 440 aa15.95■□□□□ 0.14
SHKBP1-224ENST00000600718 GTF2IRD2BQ6EKJ0 949 aa15.95■□□□□ 0.14
SHKBP1-224ENST00000600718 GTF2IRD2Q86UP8 949 aa15.95■□□□□ 0.14
SHKBP1-224ENST00000600718 GALNT16Q8N428 558 aa15.95■□□□□ 0.14
SHKBP1-224ENST00000600718 OR5J2Q8NH18 312 aa15.95■□□□□ 0.14
SHKBP1-224ENST00000600718 MFSD8Q8NHS3 518 aa15.95■□□□□ 0.14
SHKBP1-224ENST00000600718 C9orf43Q8TAL5 461 aaPredicted RBP15.95■□□□□ 0.14
SHKBP1-224ENST00000600718 FAR1Q8WVX9 515 aa15.95■□□□□ 0.14
SHKBP1-224ENST00000600718 RORBQ92753 470 aa15.95■□□□□ 0.14
SHKBP1-224ENST00000600718 TMEM80Q96HE8 168 aa15.95■□□□□ 0.14
SHKBP1-224ENST00000600718 JSRP1Q96MG2 331 aaPredicted RBP15.95■□□□□ 0.14
SHKBP1-224ENST00000600718 GNRHR2Q96P88 292 aa15.95■□□□□ 0.14
SHKBP1-224ENST00000600718 PLGRKTQ9HBL7 147 aa15.95■□□□□ 0.14
SHKBP1-224ENST00000600718 WDFY3Q8IZQ1 3526 aa15.94■□□□□ 0.14
SHKBP1-224ENST00000600718 ZNF99A8MXY4 864 aaPredicted RBP15.94■□□□□ 0.14
SHKBP1-224ENST00000600718 SHISA8B8ZZ34 492 aa15.94■□□□□ 0.14
SHKBP1-224ENST00000600718 PRR23D1E9PI22 279 aaPredicted RBP15.94■□□□□ 0.14
SHKBP1-224ENST00000600718 IMPA2O14732 288 aa15.94■□□□□ 0.14
SHKBP1-224ENST00000600718 FADS2O95864 444 aaKnown RBP15.94■□□□□ 0.14
SHKBP1-224ENST00000600718 HNRNPCP07910 306 aaKnown RBP eCLIP15.94■□□□□ 0.14
SHKBP1-224ENST00000600718 PRR23D2P0DMB1 279 aaPredicted RBP15.94■□□□□ 0.14
SHKBP1-224ENST00000600718 HTR1FP30939 366 aa15.94■□□□□ 0.14
SHKBP1-224ENST00000600718 MTNR1AP48039 350 aa15.94■□□□□ 0.14
SHKBP1-224ENST00000600718 CDH11P55287 796 aa15.94■□□□□ 0.14
SHKBP1-224ENST00000600718 RPL18Q07020 188 aaKnown RBP15.94■□□□□ 0.14
SHKBP1-224ENST00000600718 SGCBQ16585 318 aa15.94■□□□□ 0.14
SHKBP1-224ENST00000600718 ATP1A1-AS1Q5TC04 95 aa15.94■□□□□ 0.14
SHKBP1-224ENST00000600718 PLBD1Q6P4A8 553 aa15.94■□□□□ 0.14
SHKBP1-224ENST00000600718 TUBA3EQ6PEY2 450 aa15.94■□□□□ 0.14
SHKBP1-224ENST00000600718 FCGR1BQ92637 280 aa15.94■□□□□ 0.14
SHKBP1-224ENST00000600718 KATNB1Q9BVA0 655 aa15.94■□□□□ 0.14
SHKBP1-224ENST00000600718 TAPBPLQ9BX59 468 aa15.94■□□□□ 0.14
SHKBP1-224ENST00000600718 ASPNQ9BXN1 380 aa15.94■□□□□ 0.14
SHKBP1-224ENST00000600718 PCNX3Q9H6A9 2034 aa15.94■□□□□ 0.14
SHKBP1-224ENST00000600718 ZNF292O60281 2723 aa15.93■□□□□ 0.14
SHKBP1-224ENST00000600718 DCDC2BA2VCK2 349 aa15.93■□□□□ 0.14
SHKBP1-224ENST00000600718 ARGFXA6NJG6 315 aa15.93■□□□□ 0.14
SHKBP1-224ENST00000600718 ZNF701M0R085 212 aaPredicted RBP15.93■□□□□ 0.14
SHKBP1-224ENST00000600718 NKX2-8O15522 239 aa15.93■□□□□ 0.14
SHKBP1-224ENST00000600718 SEC14L2O76054 403 aa15.93■□□□□ 0.14
SHKBP1-224ENST00000600718 TFPIP10646 304 aa15.93■□□□□ 0.14
SHKBP1-224ENST00000600718 PAICSP22234 425 aaKnown RBP15.93■□□□□ 0.14
SHKBP1-224ENST00000600718 DNASE1L1P49184 302 aa15.93■□□□□ 0.14
SHKBP1-224ENST00000600718 CLK1P49759 484 aaKnown RBP15.93■□□□□ 0.14
SHKBP1-224ENST00000600718 CTXN1P60606 82 aa15.93■□□□□ 0.14
SHKBP1-224ENST00000600718 ERVK-25P63136 954 aa15.93■□□□□ 0.14
SHKBP1-224ENST00000600718 RAB40BQ12829 278 aa15.93■□□□□ 0.14
SHKBP1-224ENST00000600718 IRF3Q14653 427 aa15.93■□□□□ 0.14
SHKBP1-224ENST00000600718 TBCEQ15813 527 aaPredicted RBP15.93■□□□□ 0.14
SHKBP1-224ENST00000600718 GLYR1Q49A26 553 aaPredicted RBP15.93■□□□□ 0.14
SHKBP1-224ENST00000600718 C3orf33Q6P1S2 294 aa15.93■□□□□ 0.14
SHKBP1-224ENST00000600718 CCDC81Q6ZN84 652 aa15.93■□□□□ 0.14
SHKBP1-224ENST00000600718 Q6ZNX1 250 aa15.93■□□□□ 0.14
SHKBP1-224ENST00000600718 GTPBP8Q8N3Z3 284 aaPredicted RBP15.93■□□□□ 0.14
SHKBP1-224ENST00000600718 ATP6V1C2Q8NEY4 427 aa15.93■□□□□ 0.14
SHKBP1-224ENST00000600718 SLC25A43Q8WUT9 341 aaPredicted RBP15.93■□□□□ 0.14
SHKBP1-224ENST00000600718 PTP4A1Q93096 173 aa15.93■□□□□ 0.14
SHKBP1-224ENST00000600718 OTULINQ96BN8 352 aa15.93■□□□□ 0.14
SHKBP1-224ENST00000600718 RNFT2Q96EX2 444 aa15.93■□□□□ 0.14
SHKBP1-224ENST00000600718 CRELD1Q96HD1 420 aa15.93■□□□□ 0.14
SHKBP1-224ENST00000600718 MRPL39Q9NYK5 338 aaKnown RBP15.93■□□□□ 0.14
SHKBP1-224ENST00000600718 TAS2R5Q9NYW4 299 aa15.93■□□□□ 0.14
SHKBP1-224ENST00000600718 CORINQ9Y5Q5 1042 aa15.93■□□□□ 0.14
SHKBP1-224ENST00000600718 FAM183AA6NL82 134 aa15.93■□□□□ 0.14
SHKBP1-224ENST00000600718 FTCDNL1E5RQL4 147 aa15.93■□□□□ 0.14
SHKBP1-224ENST00000600718 HIST1H1CP16403 213 aaKnown RBP15.93■□□□□ 0.14
SHKBP1-224ENST00000600718 ACVR2AP27037 513 aa15.93■□□□□ 0.14
SHKBP1-224ENST00000600718 GRPRP30550 384 aa15.93■□□□□ 0.14
SHKBP1-224ENST00000600718 IDUAP35475 653 aa15.93■□□□□ 0.14
SHKBP1-224ENST00000600718 SELENBP1Q13228 472 aa15.93■□□□□ 0.14
SHKBP1-224ENST00000600718 CLN3Q13286 438 aa15.93■□□□□ 0.14
SHKBP1-224ENST00000600718 CRTC2Q53ET0 693 aaPredicted RBP15.93■□□□□ 0.14
SHKBP1-224ENST00000600718 EMC4Q5J8M3 183 aa15.93■□□□□ 0.14
SHKBP1-224ENST00000600718 RNLSQ5VYX0 342 aa15.93■□□□□ 0.14
SHKBP1-224ENST00000600718 MEPCEQ7L2J0 689 aaKnown RBP15.93■□□□□ 0.14
SHKBP1-224ENST00000600718 FAM98AQ8NCA5 519 aaKnown RBP15.93■□□□□ 0.14
SHKBP1-224ENST00000600718 SLC37A3Q8NCC5 494 aa15.93■□□□□ 0.14
SHKBP1-224ENST00000600718 OR52E2Q8NGJ4 325 aa15.93■□□□□ 0.14
SHKBP1-224ENST00000600718 OR13F1Q8NGS4 319 aa15.93■□□□□ 0.14
SHKBP1-224ENST00000600718 FGF20Q9NP95 211 aaPredicted RBP15.93■□□□□ 0.14
SHKBP1-224ENST00000600718 DKKL1Q9UK85 242 aa15.93■□□□□ 0.14
SHKBP1-224ENST00000600718 ADAM18Q9Y3Q7 739 aa15.93■□□□□ 0.14
SHKBP1-224ENST00000600718 ZIC3O60481 467 aa15.92■□□□□ 0.14
SHKBP1-224ENST00000600718 NEURL1O76050 574 aa15.92■□□□□ 0.14
SHKBP1-224ENST00000600718 INMTO95050 263 aa15.92■□□□□ 0.14
SHKBP1-224ENST00000600718 TXNDC12O95881 172 aa15.92■□□□□ 0.14
SHKBP1-224ENST00000600718 IL11P20809 199 aa15.92■□□□□ 0.14
SHKBP1-224ENST00000600718 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms