RNA–Protein interactions for RNA: ENST00000548247.1

RACGAP1-211, Transcript of Rac GTPase activating protein 1, human

TSL 4

Gene RACGAP1, Length 564 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RACGAP1-211	ENST00000548247	SRP14	P37108	136 aa	Known RBP	11.52	□□□□□ -0.57
RACGAP1-211	ENST00000548247	MAP2K6	P52564	334 aa		11.52	□□□□□ -0.57
RACGAP1-211	ENST00000548247	SLC16A1	P53985	500 aa		11.52	□□□□□ -0.57
RACGAP1-211	ENST00000548247	CRISP3	P54108	245 aa		11.52	□□□□□ -0.57
RACGAP1-211	ENST00000548247	SLC35A1	P78382	337 aa		11.52	□□□□□ -0.57
RACGAP1-211	ENST00000548247	H3F3A	P84243	136 aa		11.52	□□□□□ -0.57
RACGAP1-211	ENST00000548247	CARTPT	Q16568	116 aa		11.52	□□□□□ -0.57
RACGAP1-211	ENST00000548247	SWI5	Q1ZZU3	235 aa		11.52	□□□□□ -0.57
RACGAP1-211	ENST00000548247	IQCC	Q4KMZ1	466 aa		11.52	□□□□□ -0.57
RACGAP1-211	ENST00000548247	LIN52	Q52LA3	116 aa		11.52	□□□□□ -0.57
RACGAP1-211	ENST00000548247	KLHL17	Q6TDP4	642 aa		11.52	□□□□□ -0.57
RACGAP1-211	ENST00000548247	ZNF836	Q6ZNA1	936 aa		11.52	□□□□□ -0.57
RACGAP1-211	ENST00000548247	CCDC103	Q8IW40	242 aa		11.52	□□□□□ -0.57
RACGAP1-211	ENST00000548247	ZNF440	Q8IYI8	595 aa		11.52	□□□□□ -0.57
RACGAP1-211	ENST00000548247	UBE2J2	Q8N2K1	259 aa		11.52	□□□□□ -0.57
RACGAP1-211	ENST00000548247	SEMA6D	Q8NFY4	1073 aa		11.52	□□□□□ -0.57
RACGAP1-211	ENST00000548247	SLC38A5	Q8WUX1	472 aa		11.52	□□□□□ -0.57
RACGAP1-211	ENST00000548247	GTF2H4	Q92759	462 aa		11.52	□□□□□ -0.57
RACGAP1-211	ENST00000548247	APH1A	Q96BI3	265 aa		11.52	□□□□□ -0.57
RACGAP1-211	ENST00000548247	C7orf26	Q96N11	449 aa		11.52	□□□□□ -0.57
RACGAP1-211	ENST00000548247	THUMPD1	Q9NXG2	353 aa	Known RBP	11.52	□□□□□ -0.57
RACGAP1-211	ENST00000548247	TMEFF2	Q9UIK5	374 aa	Predicted RBP	11.52	□□□□□ -0.57
RACGAP1-211	ENST00000548247	ATP23	Q9Y6H3	246 aa		11.52	□□□□□ -0.57
RACGAP1-211	ENST00000548247	DSPP	Q9NZW4	1301 aa		11.52	□□□□□ -0.57
RACGAP1-211	ENST00000548247	LRP5L	A4QPB2	252 aa		11.51	□□□□□ -0.57
RACGAP1-211	ENST00000548247	TMEM247	A6NEH6	219 aa		11.51	□□□□□ -0.57
RACGAP1-211	ENST00000548247	POLR3G	O15318	223 aa	Predicted RBP	11.51	□□□□□ -0.57
RACGAP1-211	ENST00000548247	EIF1B	O60739	113 aa	Known RBP	11.51	□□□□□ -0.57
RACGAP1-211	ENST00000548247	TGDS	O95455	350 aa		11.51	□□□□□ -0.57
RACGAP1-211	ENST00000548247	IL2RG	P31785	369 aa		11.51	□□□□□ -0.57
RACGAP1-211	ENST00000548247	APOBEC3A	P31941	199 aa	Predicted RBP	11.51	□□□□□ -0.57
RACGAP1-211	ENST00000548247	NTF4	P34130	210 aa		11.51	□□□□□ -0.57
RACGAP1-211	ENST00000548247	ACAA2	P42765	397 aa	Known RBP	11.51	□□□□□ -0.57
RACGAP1-211	ENST00000548247	COMP	P49747	757 aa	Predicted RBP	11.51	□□□□□ -0.57
RACGAP1-211	ENST00000548247	FOXG1	P55316	489 aa	Predicted RBP	11.51	□□□□□ -0.57
RACGAP1-211	ENST00000548247	STX1B	P61266	288 aa		11.51	□□□□□ -0.57
RACGAP1-211	ENST00000548247	RPS26P11	Q5JNZ5	115 aa	Predicted RBP	11.51	□□□□□ -0.57
RACGAP1-211	ENST00000548247	RNF220	Q5VTB9	566 aa		11.51	□□□□□ -0.57
RACGAP1-211	ENST00000548247	FBXW9	Q5XUX1	488 aa		11.51	□□□□□ -0.57
RACGAP1-211	ENST00000548247	SLC2A7	Q6PXP3	512 aa		11.51	□□□□□ -0.57
RACGAP1-211	ENST00000548247	ANKS4B	Q8N8V4	417 aa		11.51	□□□□□ -0.57
RACGAP1-211	ENST00000548247	LRRC8C	Q8TDW0	803 aa		11.51	□□□□□ -0.57
RACGAP1-211	ENST00000548247	ZMYND19	Q96E35	227 aa	Predicted RBP	11.51	□□□□□ -0.57
RACGAP1-211	ENST00000548247	FBXO17	Q96EF6	278 aa		11.51	□□□□□ -0.57
RACGAP1-211	ENST00000548247	TMEM19	Q96HH6	336 aa		11.51	□□□□□ -0.57
RACGAP1-211	ENST00000548247	NAA11	Q9BSU3	229 aa	Predicted RBP	11.51	□□□□□ -0.57
RACGAP1-211	ENST00000548247	BPESC1	Q9GZL8	116 aa		11.51	□□□□□ -0.57
RACGAP1-211	ENST00000548247	PAIP1	Q9H074	479 aa	Known RBP	11.51	□□□□□ -0.57
RACGAP1-211	ENST00000548247	OCEL1	Q9H607	264 aa		11.51	□□□□□ -0.57
RACGAP1-211	ENST00000548247	TCF7L2	Q9NQB0	619 aa		11.51	□□□□□ -0.57
RACGAP1-211	ENST00000548247	ZNF443	Q9Y2A4	671 aa	Predicted RBP	11.51	□□□□□ -0.57
RACGAP1-211	ENST00000548247	PCDHB14	Q9Y5E9	798 aa		11.51	□□□□□ -0.57
RACGAP1-211	ENST00000548247		A0A0G2JPF8	293 aa		11.5	□□□□□ -0.57
RACGAP1-211	ENST00000548247	LOC390937	A0A1W2PQ73	354 aa		11.5	□□□□□ -0.57
RACGAP1-211	ENST00000548247	CIB4	A0PJX0	185 aa		11.5	□□□□□ -0.57
RACGAP1-211	ENST00000548247	ZC3H12D	A2A288	527 aa	Known RBP	11.5	□□□□□ -0.57
RACGAP1-211	ENST00000548247	HNRNPCL2	B2RXH8	293 aa		11.5	□□□□□ -0.57
RACGAP1-211	ENST00000548247	HNRNPCL3	B7ZW38	293 aa		11.5	□□□□□ -0.57
RACGAP1-211	ENST00000548247	CLIC1	O00299	241 aa		11.5	□□□□□ -0.57
RACGAP1-211	ENST00000548247	HNRNPCL1	O60812	293 aa	Known RBP	11.5	□□□□□ -0.57
RACGAP1-211	ENST00000548247	MRPL33	O75394	65 aa	Known RBP	11.5	□□□□□ -0.57
RACGAP1-211	ENST00000548247	NUDT7	P0C024	238 aa		11.5	□□□□□ -0.57
RACGAP1-211	ENST00000548247	HNRNPCL4	P0DMR1	293 aa		11.5	□□□□□ -0.57
RACGAP1-211	ENST00000548247	CXCR1	P25024	350 aa		11.5	□□□□□ -0.57
RACGAP1-211	ENST00000548247	MRPL19	P49406	292 aa	Known RBP	11.5	□□□□□ -0.57
RACGAP1-211	ENST00000548247	IDH3A	P50213	366 aa		11.5	□□□□□ -0.57
RACGAP1-211	ENST00000548247	LARS2	Q15031	903 aa	Known RBP	11.5	□□□□□ -0.57
RACGAP1-211	ENST00000548247	RGN	Q15493	299 aa		11.5	□□□□□ -0.57
RACGAP1-211	ENST00000548247	ZSWIM7	Q19AV6	140 aa		11.5	□□□□□ -0.57
RACGAP1-211	ENST00000548247	WBP2NL	Q6ICG8	309 aa		11.5	□□□□□ -0.57
RACGAP1-211	ENST00000548247	CLIP4	Q8N3C7	705 aa		11.5	□□□□□ -0.57
RACGAP1-211	ENST00000548247	CADM2	Q8N3J6	435 aa		11.5	□□□□□ -0.57
RACGAP1-211	ENST00000548247	C3orf56	Q8N813	242 aa		11.5	□□□□□ -0.57
RACGAP1-211	ENST00000548247	ZFAND2B	Q8WV99	257 aa		11.5	□□□□□ -0.57
RACGAP1-211	ENST00000548247	ATP6V1G3	Q96LB4	118 aa		11.5	□□□□□ -0.57
RACGAP1-211	ENST00000548247	EBF4	Q9BQW3	602 aa		11.5	□□□□□ -0.57
RACGAP1-211	ENST00000548247	SPATA9	Q9BWV2	254 aa		11.5	□□□□□ -0.57
RACGAP1-211	ENST00000548247	RAD21L1	Q9H4I0	556 aa		11.5	□□□□□ -0.57
RACGAP1-211	ENST00000548247	CACYBP	Q9HB71	228 aa	Known RBP	11.5	□□□□□ -0.57
RACGAP1-211	ENST00000548247	SLCO1B3	Q9NPD5	702 aa		11.5	□□□□□ -0.57
RACGAP1-211	ENST00000548247	ASB6	Q9NWX5	421 aa		11.5	□□□□□ -0.57
RACGAP1-211	ENST00000548247	PRDM4	Q9UKN5	801 aa		11.5	□□□□□ -0.57
RACGAP1-211	ENST00000548247	ZNF232	Q9UNY5	417 aa		11.5	□□□□□ -0.57
RACGAP1-211	ENST00000548247	FKBP7	Q9Y680	259 aa		11.5	□□□□□ -0.57
RACGAP1-211	ENST00000548247	VWF	P04275	2813 aa		11.49	□□□□□ -0.57
RACGAP1-211	ENST00000548247	NUP214	P35658	2090 aa	Predicted RBP	11.49	□□□□□ -0.57
RACGAP1-211	ENST00000548247		A0A096LPI6	279 aa		11.49	□□□□□ -0.57
RACGAP1-211	ENST00000548247	CCT8L1P	A6NM43	557 aa		11.49	□□□□□ -0.57
RACGAP1-211	ENST00000548247	GPI	P06744	558 aa		11.49	□□□□□ -0.57
RACGAP1-211	ENST00000548247	PRG2	P13727	222 aa		11.49	□□□□□ -0.57
RACGAP1-211	ENST00000548247	HOXB9	P17482	250 aa	Predicted RBP	11.49	□□□□□ -0.57
RACGAP1-211	ENST00000548247	NCF2	P19878	526 aa	Predicted RBP	11.49	□□□□□ -0.57
RACGAP1-211	ENST00000548247	COPZ1	P61923	177 aa		11.49	□□□□□ -0.57
RACGAP1-211	ENST00000548247	ACTG1	P63261	375 aa		11.49	□□□□□ -0.57
RACGAP1-211	ENST00000548247	FADD	Q13158	208 aa		11.49	□□□□□ -0.57
RACGAP1-211	ENST00000548247	CEACAM7	Q14002	265 aa		11.49	□□□□□ -0.57
RACGAP1-211	ENST00000548247	SLC17A1	Q14916	467 aa		11.49	□□□□□ -0.57
RACGAP1-211	ENST00000548247	GABRA6	Q16445	453 aa		11.49	□□□□□ -0.57
RACGAP1-211	ENST00000548247	TTMP	Q5BVD1	217 aa		11.49	□□□□□ -0.57
RACGAP1-211	ENST00000548247	BLOC1S3	Q6QNY0	202 aa		11.49	□□□□□ -0.57

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