RNA–Protein interactions for RNA: ENST00000447124.1

SDC1-205, Transcript of syndecan 1, humanhuman

TSL 4

Gene SDC1, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-205ENST00000447124 DYDC1Q8WWB3 177 aa18.18■□□□□ 0.5
SDC1-205ENST00000447124 CKAP2Q8WWK9 683 aa18.18■□□□□ 0.5
SDC1-205ENST00000447124 SLC25A36Q96CQ1 311 aa18.18■□□□□ 0.5
SDC1-205ENST00000447124 RADILQ96JH8 1075 aa18.18■□□□□ 0.5
SDC1-205ENST00000447124 WFDC6Q9BQY6 131 aa18.18■□□□□ 0.5
SDC1-205ENST00000447124 SLCO5A1Q9H2Y9 848 aa18.18■□□□□ 0.5
SDC1-205ENST00000447124 CACYBPQ9HB71 228 aaKnown RBP18.18■□□□□ 0.5
SDC1-205ENST00000447124 TMEM45AQ9NWC5 275 aa18.18■□□□□ 0.5
SDC1-205ENST00000447124 MGAT4BQ9UQ53 548 aa18.18■□□□□ 0.5
SDC1-205ENST00000447124 TTKP33981 857 aa18.17■□□□□ 0.5
SDC1-205ENST00000447124 ACVR1BP36896 505 aa18.17■□□□□ 0.5
SDC1-205ENST00000447124 SQLEQ14534 574 aa18.17■□□□□ 0.5
SDC1-205ENST00000447124 RUNDC3AQ59EK9 446 aa18.17■□□□□ 0.5
SDC1-205ENST00000447124 DHRS4L2Q6PKH6 230 aa18.17■□□□□ 0.5
SDC1-205ENST00000447124 SLC22A25Q6T423 547 aa18.17■□□□□ 0.5
SDC1-205ENST00000447124 KLHL17Q6TDP4 642 aa18.17■□□□□ 0.5
SDC1-205ENST00000447124 C6orf89Q6UWU4 347 aa18.17■□□□□ 0.5
SDC1-205ENST00000447124 DNM1P46Q6ZS02 220 aa18.17■□□□□ 0.5
SDC1-205ENST00000447124 LINGO2Q7L985 606 aa18.17■□□□□ 0.5
SDC1-205ENST00000447124 POMGNT2Q8NAT1 580 aa18.17■□□□□ 0.5
SDC1-205ENST00000447124 MAPK1IP1LQ8NDC0 245 aa18.17■□□□□ 0.5
SDC1-205ENST00000447124 DHRS9Q9BPW9 319 aa18.17■□□□□ 0.5
SDC1-205ENST00000447124 INTS9Q9NV88 658 aaKnown RBP18.17■□□□□ 0.5
SDC1-205ENST00000447124 SEC14L4Q9UDX3 406 aa18.17■□□□□ 0.5
SDC1-205ENST00000447124 ABCA1O95477 2261 aa18.16■□□□□ 0.5
SDC1-205ENST00000447124 A0A1B0GWA3 101 aa18.16■□□□□ 0.5
SDC1-205ENST00000447124 RNF223E7ERA6 249 aa18.16■□□□□ 0.5
SDC1-205ENST00000447124 TPST2O60704 377 aa18.16■□□□□ 0.5
SDC1-205ENST00000447124 UPK3AO75631 287 aa18.16■□□□□ 0.5
SDC1-205ENST00000447124 VAMP5O95183 116 aa18.16■□□□□ 0.5
SDC1-205ENST00000447124 AHSA1O95433 338 aa18.16■□□□□ 0.5
SDC1-205ENST00000447124 PNMTP11086 282 aa18.16■□□□□ 0.5
SDC1-205ENST00000447124 CDH2P19022 906 aaPredicted RBP18.16■□□□□ 0.5
SDC1-205ENST00000447124 RPS5P46782 204 aaKnown RBP18.16■□□□□ 0.5
SDC1-205ENST00000447124 KRTAP1-1Q07627 177 aa18.16■□□□□ 0.5
SDC1-205ENST00000447124 HIKESHIQ53FT3 197 aa18.16■□□□□ 0.5
SDC1-205ENST00000447124 C11orf71Q6IPW1 123 aa18.16■□□□□ 0.5
SDC1-205ENST00000447124 C17orf78Q8N4C9 275 aa18.16■□□□□ 0.5
SDC1-205ENST00000447124 LSMEM1Q8N8F7 131 aa18.16■□□□□ 0.5
SDC1-205ENST00000447124 TAAR8Q969N4 342 aa18.16■□□□□ 0.5
SDC1-205ENST00000447124 BOD1Q96IK1 185 aa18.16■□□□□ 0.5
SDC1-205ENST00000447124 CPPED1Q9BRF8 314 aaPredicted RBP18.16■□□□□ 0.5
SDC1-205ENST00000447124 ZNF385DQ9H6B1 395 aa18.16■□□□□ 0.5
SDC1-205ENST00000447124 TMEM38AQ9H6F2 299 aa18.16■□□□□ 0.5
SDC1-205ENST00000447124 RASD1Q9Y272 281 aa18.16■□□□□ 0.5
SDC1-205ENST00000447124 IGKV1D-42A0A075B6H8 117 aa18.15■□□□□ 0.5
SDC1-205ENST00000447124 ELOA3DA6NLF2 546 aaPredicted RBP18.15■□□□□ 0.5
SDC1-205ENST00000447124 HMGB1P1B2RPK0 211 aaPredicted RBP18.15■□□□□ 0.5
SDC1-205ENST00000447124 FZD7O75084 574 aa18.15■□□□□ 0.5
SDC1-205ENST00000447124 LGI1O95970 557 aa18.15■□□□□ 0.5
SDC1-205ENST00000447124 PPIBP23284 216 aaKnown RBP18.15■□□□□ 0.5
SDC1-205ENST00000447124 PCSK6P29122 969 aa18.15■□□□□ 0.5
SDC1-205ENST00000447124 IRX1P78414 480 aaPredicted RBP18.15■□□□□ 0.5
SDC1-205ENST00000447124 TGFBR3Q03167 851 aa18.15■□□□□ 0.5
SDC1-205ENST00000447124 SCARB2Q14108 478 aa18.15■□□□□ 0.5
SDC1-205ENST00000447124 VEZF1Q14119 521 aa18.15■□□□□ 0.5
SDC1-205ENST00000447124 ELOA3BQ3SY89 546 aa18.15■□□□□ 0.5
SDC1-205ENST00000447124 AGAP6Q5VW22 663 aa18.15■□□□□ 0.5
SDC1-205ENST00000447124 HDXQ7Z353 690 aa18.15■□□□□ 0.5
SDC1-205ENST00000447124 RETREG3Q86VR2 466 aa18.15■□□□□ 0.5
SDC1-205ENST00000447124 ELOA3Q8NG57 546 aa18.15■□□□□ 0.5
SDC1-205ENST00000447124 MAGEB18Q96M61 343 aa18.15■□□□□ 0.5
SDC1-205ENST00000447124 REG4Q9BYZ8 158 aa18.15■□□□□ 0.5
SDC1-205ENST00000447124 ALG2Q9H553 416 aa18.15■□□□□ 0.5
SDC1-205ENST00000447124 C12orf10Q9HB07 376 aa18.15■□□□□ 0.5
SDC1-205ENST00000447124 B3GAT1Q9P2W7 334 aa18.15■□□□□ 0.5
SDC1-205ENST00000447124 AMDHD2Q9Y303 409 aa18.15■□□□□ 0.5
SDC1-205ENST00000447124 SONP18583 2426 aaKnown RBP18.15■□□□□ 0.5
SDC1-205ENST00000447124 PRPS1P60891 318 aa18.14■□□□□ 0.49
SDC1-205ENST00000447124 ETFDHQ16134 617 aa18.14■□□□□ 0.49
SDC1-205ENST00000447124 NIPAL3Q6P499 406 aa18.14■□□□□ 0.49
SDC1-205ENST00000447124 PTOV1Q86YD1 416 aa18.14■□□□□ 0.49
SDC1-205ENST00000447124 BCL2L2Q92843 193 aaPredicted RBP18.14■□□□□ 0.49
SDC1-205ENST00000447124 FAIMQ9NVQ4 179 aa18.14■□□□□ 0.49
SDC1-205ENST00000447124 RPS6KB2Q9UBS0 482 aa18.14■□□□□ 0.49
SDC1-205ENST00000447124 NIPSNAP3AQ9UFN0 247 aaPredicted RBP18.14■□□□□ 0.49
SDC1-205ENST00000447124 POU2F3Q9UKI9 436 aa18.14■□□□□ 0.49
SDC1-205ENST00000447124 DNHD1Q96M86 4753 aa18.14■□□□□ 0.49
SDC1-205ENST00000447124 EVPLLA8MZ36 301 aa18.13■□□□□ 0.49
SDC1-205ENST00000447124 INAFM1C9JVW0 142 aa18.13■□□□□ 0.49
SDC1-205ENST00000447124 ZNF432O94892 652 aa18.13■□□□□ 0.49
SDC1-205ENST00000447124 H2AFXP16104 143 aaPredicted RBP18.13■□□□□ 0.49
SDC1-205ENST00000447124 SLC6A2P23975 617 aa18.13■□□□□ 0.49
SDC1-205ENST00000447124 AQP1P29972 269 aa18.13■□□□□ 0.49
SDC1-205ENST00000447124 FABP6P51161 128 aa18.13■□□□□ 0.49
SDC1-205ENST00000447124 DMTNQ08495 405 aa18.13■□□□□ 0.49
SDC1-205ENST00000447124 SELPLGQ14242 412 aa18.13■□□□□ 0.49
SDC1-205ENST00000447124 TBRG1Q3YBR2 411 aa18.13■□□□□ 0.49
SDC1-205ENST00000447124 KRT73Q86Y46 540 aa18.13■□□□□ 0.49
SDC1-205ENST00000447124 OR1K1Q8NGR3 316 aa18.13■□□□□ 0.49
SDC1-205ENST00000447124 STON2Q8WXE9 905 aa18.13■□□□□ 0.49
SDC1-205ENST00000447124 SPATA5L1Q9BVQ7 753 aa18.13■□□□□ 0.49
SDC1-205ENST00000447124 CACNG6Q9BXT2 260 aa18.13■□□□□ 0.49
SDC1-205ENST00000447124 VIPAS39Q9H9C1 493 aa18.13■□□□□ 0.49
SDC1-205ENST00000447124 CBLN4Q9NTU7 201 aa18.13■□□□□ 0.49
SDC1-205ENST00000447124 ATP23Q9Y6H3 246 aa18.13■□□□□ 0.49
SDC1-205ENST00000447124 MFN2O95140 757 aa18.12■□□□□ 0.49
SDC1-205ENST00000447124 CBLP22681 906 aa18.12■□□□□ 0.49
SDC1-205ENST00000447124 GRPRP30550 384 aa18.12■□□□□ 0.49
SDC1-205ENST00000447124 CLDN17P56750 224 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms