RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 MEPCEQ7L2J0 689 aaKnown RBP13.7□□□□□ -0.22
SCAF11-204ENST00000395454 GATSQ8NAP1 163 aa13.7□□□□□ -0.22
SCAF11-204ENST00000395454 PSD4Q8NDX1 1056 aa13.7□□□□□ -0.22
SCAF11-204ENST00000395454 FDCSPQ8NFU4 85 aa13.7□□□□□ -0.22
SCAF11-204ENST00000395454 KBTBD8Q8NFY9 601 aa13.7□□□□□ -0.22
SCAF11-204ENST00000395454 OR51A7Q8NH64 312 aa13.7□□□□□ -0.22
SCAF11-204ENST00000395454 PTP4A1Q93096 173 aa13.7□□□□□ -0.22
SCAF11-204ENST00000395454 ZNF524Q96C55 264 aa13.7□□□□□ -0.22
SCAF11-204ENST00000395454 NXF2Q9GZY0 626 aaKnown RBP13.7□□□□□ -0.22
SCAF11-204ENST00000395454 OR51E2Q9H255 320 aa13.7□□□□□ -0.22
SCAF11-204ENST00000395454 PALMDQ9NP74 551 aa13.7□□□□□ -0.22
SCAF11-204ENST00000395454 CCDC59Q9P031 241 aaKnown RBP13.7□□□□□ -0.22
SCAF11-204ENST00000395454 CACNA1GO43497 2377 aa13.7□□□□□ -0.22
SCAF11-204ENST00000395454 ELOA3DA6NLF2 546 aaPredicted RBP13.7□□□□□ -0.22
SCAF11-204ENST00000395454 RIIAD1A6NNX1 92 aa13.7□□□□□ -0.22
SCAF11-204ENST00000395454 GTPBP1O00178 669 aaKnown RBP13.7□□□□□ -0.22
SCAF11-204ENST00000395454 EVI2BP34910 448 aa13.7□□□□□ -0.22
SCAF11-204ENST00000395454 BMXP51813 675 aa13.7□□□□□ -0.22
SCAF11-204ENST00000395454 SOX8P57073 446 aa13.7□□□□□ -0.22
SCAF11-204ENST00000395454 TPBGQ13641 420 aa13.7□□□□□ -0.22
SCAF11-204ENST00000395454 EFR3AQ14156 821 aa13.7□□□□□ -0.22
SCAF11-204ENST00000395454 ELOA3BQ3SY89 546 aa13.7□□□□□ -0.22
SCAF11-204ENST00000395454 ACER2Q5QJU3 275 aa13.7□□□□□ -0.22
SCAF11-204ENST00000395454 AGAP7PQ5VUJ5 663 aa13.7□□□□□ -0.22
SCAF11-204ENST00000395454 DESI1Q6ICB0 168 aa13.7□□□□□ -0.22
SCAF11-204ENST00000395454 PLBD1Q6P4A8 553 aa13.7□□□□□ -0.22
SCAF11-204ENST00000395454 DPY19L2P2Q6ZN68 376 aa13.7□□□□□ -0.22
SCAF11-204ENST00000395454 LSRQ86X29 649 aaPredicted RBP13.7□□□□□ -0.22
SCAF11-204ENST00000395454 CROCCP3Q8IVE0 287 aa13.7□□□□□ -0.22
SCAF11-204ENST00000395454 MISPQ8IVT2 679 aa13.7□□□□□ -0.22
SCAF11-204ENST00000395454 PHC2Q8IXK0 858 aa13.7□□□□□ -0.22
SCAF11-204ENST00000395454 ELOA3Q8NG57 546 aa13.7□□□□□ -0.22
SCAF11-204ENST00000395454 OR52N1Q8NH53 320 aa13.7□□□□□ -0.22
SCAF11-204ENST00000395454 AGAP4Q96P64 663 aa13.7□□□□□ -0.22
SCAF11-204ENST00000395454 RASL10BQ96S79 203 aa13.7□□□□□ -0.22
SCAF11-204ENST00000395454 SIAEQ9HAT2 523 aa13.7□□□□□ -0.22
SCAF11-204ENST00000395454 ZBTB20Q9HC78 741 aaPredicted RBP13.7□□□□□ -0.22
SCAF11-204ENST00000395454 STMN3Q9NZ72 180 aa13.7□□□□□ -0.22
SCAF11-204ENST00000395454 SEC14L4Q9UDX3 406 aa13.7□□□□□ -0.22
SCAF11-204ENST00000395454 HIF3AQ9Y2N7 669 aa13.7□□□□□ -0.22
SCAF11-204ENST00000395454 CCDC182A6NF36 153 aa13.69□□□□□ -0.22
SCAF11-204ENST00000395454 SLC22A31A6NKX4 558 aa13.69□□□□□ -0.22
SCAF11-204ENST00000395454 IDH3BO43837 385 aa13.69□□□□□ -0.22
SCAF11-204ENST00000395454 CDC40O60508 579 aaKnown RBP eCLIP13.69□□□□□ -0.22
SCAF11-204ENST00000395454 ZNF354AO60765 605 aaPredicted RBP13.69□□□□□ -0.22
SCAF11-204ENST00000395454 NADKO95544 446 aaPredicted RBP13.69□□□□□ -0.22
SCAF11-204ENST00000395454 ZNF3P17036 446 aa13.69□□□□□ -0.22
SCAF11-204ENST00000395454 DLX5P56178 289 aa13.69□□□□□ -0.22
SCAF11-204ENST00000395454 EGR4Q05215 589 aa13.69□□□□□ -0.22
SCAF11-204ENST00000395454 ITGADQ13349 1161 aa13.69□□□□□ -0.22
SCAF11-204ENST00000395454 ZNF74Q16587 644 aa13.69□□□□□ -0.22
SCAF11-204ENST00000395454 ABHD17BQ5VST6 288 aa13.69□□□□□ -0.22
SCAF11-204ENST00000395454 LINC00696Q6ZRV3 163 aa13.69□□□□□ -0.22
SCAF11-204ENST00000395454 SLC37A3Q8NCC5 494 aa13.69□□□□□ -0.22
SCAF11-204ENST00000395454 OR5W2Q8NH69 310 aa13.69□□□□□ -0.22
SCAF11-204ENST00000395454 SLC22A8Q8TCC7 542 aa13.69□□□□□ -0.22
SCAF11-204ENST00000395454 TM9SF4Q92544 642 aa13.69□□□□□ -0.22
SCAF11-204ENST00000395454 ARHGAP9Q9BRR9 750 aa13.69□□□□□ -0.22
SCAF11-204ENST00000395454 CENPOQ9BU64 300 aa13.69□□□□□ -0.22
SCAF11-204ENST00000395454 NRIP3Q9NQ35 241 aa13.69□□□□□ -0.22
SCAF11-204ENST00000395454 CHCHD3Q9NX63 227 aaKnown RBP13.69□□□□□ -0.22
SCAF11-204ENST00000395454 YARS2Q9Y2Z4 477 aaKnown RBP13.69□□□□□ -0.22
SCAF11-204ENST00000395454 PCDHGB6Q9Y5F9 930 aa13.69□□□□□ -0.22
SCAF11-204ENST00000395454 FAM183AA6NL82 134 aa13.68□□□□□ -0.22
SCAF11-204ENST00000395454 NDUFB5O43674 189 aa13.68□□□□□ -0.22
SCAF11-204ENST00000395454 GPX5O75715 221 aa13.68□□□□□ -0.22
SCAF11-204ENST00000395454 PPP1R3DO95685 299 aa13.68□□□□□ -0.22
SCAF11-204ENST00000395454 IFNGP01579 166 aa13.68□□□□□ -0.22
SCAF11-204ENST00000395454 APEHP13798 732 aaKnown RBP13.68□□□□□ -0.22
SCAF11-204ENST00000395454 HK1P19367 917 aa13.68□□□□□ -0.22
SCAF11-204ENST00000395454 TGFBR1P36897 503 aa13.68□□□□□ -0.22
SCAF11-204ENST00000395454 SOX3P41225 446 aa13.68□□□□□ -0.22
SCAF11-204ENST00000395454 CRYBB2P43320 205 aa13.68□□□□□ -0.22
SCAF11-204ENST00000395454 MLF1P58340 268 aa13.68□□□□□ -0.22
SCAF11-204ENST00000395454 PRPS1P60891 318 aa13.68□□□□□ -0.22
SCAF11-204ENST00000395454 TMEM156Q8N614 296 aa13.68□□□□□ -0.22
SCAF11-204ENST00000395454 OR4F15Q8NGB8 312 aa13.68□□□□□ -0.22
SCAF11-204ENST00000395454 SNRNP27Q8WVK2 155 aaKnown RBP13.68□□□□□ -0.22
SCAF11-204ENST00000395454 EXTL1Q92935 676 aa13.68□□□□□ -0.22
SCAF11-204ENST00000395454 BORCS5Q969J3 196 aa13.68□□□□□ -0.22
SCAF11-204ENST00000395454 CNTNAP3BQ96NU0 1288 aa13.68□□□□□ -0.22
SCAF11-204ENST00000395454 KLHDC3Q9BQ90 382 aa13.68□□□□□ -0.22
SCAF11-204ENST00000395454 HCAR1Q9BXC0 346 aa13.68□□□□□ -0.22
SCAF11-204ENST00000395454 CNTNAP3Q9BZ76 1288 aa13.68□□□□□ -0.22
SCAF11-204ENST00000395454 TBL1XR1Q9BZK7 514 aa13.68□□□□□ -0.22
SCAF11-204ENST00000395454 ZNF552Q9H707 407 aaPredicted RBP13.68□□□□□ -0.22
SCAF11-204ENST00000395454 AKIP1Q9NQ31 210 aa13.68□□□□□ -0.22
SCAF11-204ENST00000395454 INPP5EQ9NRR6 644 aa13.68□□□□□ -0.22
SCAF11-204ENST00000395454 ERVK13-1Q9NX77 482 aa13.68□□□□□ -0.22
SCAF11-204ENST00000395454 ANKRD10Q9NXR5 420 aa13.68□□□□□ -0.22
SCAF11-204ENST00000395454 H2AFY2Q9P0M6 372 aaPredicted RBP13.68□□□□□ -0.22
SCAF11-204ENST00000395454 NPFFR2Q9Y5X5 522 aa13.68□□□□□ -0.22
SCAF11-204ENST00000395454 PCNX3Q9H6A9 2034 aa13.68□□□□□ -0.22
SCAF11-204ENST00000395454 PRR23D1E9PI22 279 aaPredicted RBP13.68□□□□□ -0.22
SCAF11-204ENST00000395454 HCRTR2O43614 444 aa13.68□□□□□ -0.22
SCAF11-204ENST00000395454 ASAH2BP0C7U1 165 aa13.68□□□□□ -0.22
SCAF11-204ENST00000395454 PRR23D2P0DMB1 279 aaPredicted RBP13.68□□□□□ -0.22
SCAF11-204ENST00000395454 SSR4P51571 173 aa13.68□□□□□ -0.22
SCAF11-204ENST00000395454 CRMP1Q14194 572 aa13.68□□□□□ -0.22
SCAF11-204ENST00000395454 SLC35F1Q5T1Q4 408 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms