RNA–Protein interactions for RNA: ENST00000359052.8

SMARCAD1-202, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS ALT1 TSL 1 (best)

Gene SMARCAD1, Length 5,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-202ENST00000359052 SHBGP04278 402 aa1.54□□□□□ -2.16
SMARCAD1-202ENST00000359052 C2P06681 752 aa1.54□□□□□ -2.16
SMARCAD1-202ENST00000359052 UBTFL6P0CB48 400 aaPredicted RBP1.54□□□□□ -2.16
SMARCAD1-202ENST00000359052 MSR1P21757 451 aa1.54□□□□□ -2.16
SMARCAD1-202ENST00000359052 S100A1P23297 94 aa1.54□□□□□ -2.16
SMARCAD1-202ENST00000359052 F8A1P23610 371 aa1.54□□□□□ -2.16
SMARCAD1-202ENST00000359052 ZP1P60852 638 aa1.54□□□□□ -2.16
SMARCAD1-202ENST00000359052 HERV-K104P63124 156 aa1.54□□□□□ -2.16
SMARCAD1-202ENST00000359052 TSC22D1Q15714 1073 aa1.54□□□□□ -2.16
SMARCAD1-202ENST00000359052 HLFQ16534 295 aa1.54□□□□□ -2.16
SMARCAD1-202ENST00000359052 ZNF239Q16600 458 aaKnown RBP1.54□□□□□ -2.16
SMARCAD1-202ENST00000359052 GPAT3Q53EU6 434 aa1.54□□□□□ -2.16
SMARCAD1-202ENST00000359052 SLC8B1Q6J4K2 584 aa1.54□□□□□ -2.16
SMARCAD1-202ENST00000359052 FAM180AQ6UWF9 173 aa1.54□□□□□ -2.16
SMARCAD1-202ENST00000359052 CD300LDQ6UXZ3 194 aa1.54□□□□□ -2.16
SMARCAD1-202ENST00000359052 HACD2Q6Y1H2 254 aa1.54□□□□□ -2.16
SMARCAD1-202ENST00000359052 KRTAP5-2Q701N4 177 aa1.54□□□□□ -2.16
SMARCAD1-202ENST00000359052 CYB5R4Q7L1T6 521 aa1.54□□□□□ -2.16
SMARCAD1-202ENST00000359052 MON1BQ7L1V2 547 aa1.54□□□□□ -2.16
SMARCAD1-202ENST00000359052 H2BFWTQ7Z2G1 175 aa1.54□□□□□ -2.16
SMARCAD1-202ENST00000359052 CCDC50Q8IVM0 306 aa1.54□□□□□ -2.16
SMARCAD1-202ENST00000359052 OR1J2Q8NGS2 313 aa1.54□□□□□ -2.16
SMARCAD1-202ENST00000359052 OR4Q3Q8NH05 313 aa1.54□□□□□ -2.16
SMARCAD1-202ENST00000359052 LHX4Q969G2 390 aa1.54□□□□□ -2.16
SMARCAD1-202ENST00000359052 ORAI1Q96D31 301 aa1.54□□□□□ -2.16
SMARCAD1-202ENST00000359052 C18orf12Q96KH6 178 aa1.54□□□□□ -2.16
SMARCAD1-202ENST00000359052 ZNF582Q96NG8 517 aaPredicted RBP1.54□□□□□ -2.16
SMARCAD1-202ENST00000359052 OR52B2Q96RD2 323 aa1.54□□□□□ -2.16
SMARCAD1-202ENST00000359052 NPAS2Q99743 824 aa1.54□□□□□ -2.16
SMARCAD1-202ENST00000359052 SH2D3AQ9BRG2 576 aa1.54□□□□□ -2.16
SMARCAD1-202ENST00000359052 ALG12Q9BV10 488 aa1.54□□□□□ -2.16
SMARCAD1-202ENST00000359052 SIX2Q9NPC8 291 aa1.54□□□□□ -2.16
SMARCAD1-202ENST00000359052 INTS9Q9NV88 658 aaKnown RBP1.54□□□□□ -2.16
SMARCAD1-202ENST00000359052 SLC24A2Q9UI40 661 aa1.54□□□□□ -2.16
SMARCAD1-202ENST00000359052 TCF19Q9Y242 345 aa1.54□□□□□ -2.16
SMARCAD1-202ENST00000359052 RBMX2Q9Y388 322 aaKnown RBP1.54□□□□□ -2.16
SMARCAD1-202ENST00000359052 PPIAL4EA0A075B759 164 aa1.54□□□□□ -2.16
SMARCAD1-202ENST00000359052 PPIAL4CA0A0B4J2A2 164 aa1.54□□□□□ -2.16
SMARCAD1-202ENST00000359052 C1orf232A0A0U1RR37 186 aa1.54□□□□□ -2.16
SMARCAD1-202ENST00000359052 ZNF98A6NK75 572 aa1.54□□□□□ -2.16
SMARCAD1-202ENST00000359052 G3V2L1 256 aa1.54□□□□□ -2.16
SMARCAD1-202ENST00000359052 H3BNH8 94 aa1.54□□□□□ -2.16
SMARCAD1-202ENST00000359052 AIREO43918 545 aa1.54□□□□□ -2.16
SMARCAD1-202ENST00000359052 TIMM8AO60220 97 aaPredicted RBP1.54□□□□□ -2.16
SMARCAD1-202ENST00000359052 UGT2B11O75310 529 aa1.54□□□□□ -2.16
SMARCAD1-202ENST00000359052 VPS4BO75351 444 aa1.54□□□□□ -2.16
SMARCAD1-202ENST00000359052 NKX2-2O95096 273 aa1.54□□□□□ -2.16
SMARCAD1-202ENST00000359052 TMEM50AO95807 157 aa1.54□□□□□ -2.16
SMARCAD1-202ENST00000359052 IGHG1P01857 330 aa1.54□□□□□ -2.16
SMARCAD1-202ENST00000359052 ZNF806P0C7X5 589 aa1.54□□□□□ -2.16
SMARCAD1-202ENST00000359052 PPIAL4FP0DN26 164 aa1.54□□□□□ -2.16
SMARCAD1-202ENST00000359052 ERVPABLB-1P60509 514 aa1.54□□□□□ -2.16
SMARCAD1-202ENST00000359052 PITX1P78337 314 aaPredicted RBP1.54□□□□□ -2.16
SMARCAD1-202ENST00000359052 PRR3P79522 188 aaKnown RBP1.54□□□□□ -2.16
SMARCAD1-202ENST00000359052 GTF3C1Q12789 2109 aa1.54□□□□□ -2.16
SMARCAD1-202ENST00000359052 HNF4GQ14541 408 aa1.54□□□□□ -2.16
SMARCAD1-202ENST00000359052 EXOSC7Q15024 291 aaKnown RBP1.54□□□□□ -2.16
SMARCAD1-202ENST00000359052 KCTD21Q4G0X4 260 aa1.54□□□□□ -2.16
SMARCAD1-202ENST00000359052 BICRALQ6AI39 1079 aa1.54□□□□□ -2.16
SMARCAD1-202ENST00000359052 TMEM107Q6UX40 140 aa1.54□□□□□ -2.16
SMARCAD1-202ENST00000359052 Q6ZS49 121 aa1.54□□□□□ -2.16
SMARCAD1-202ENST00000359052 LHFPL3Q86UP9 236 aa1.54□□□□□ -2.16
SMARCAD1-202ENST00000359052 RDH10Q8IZV5 341 aa1.54□□□□□ -2.16
SMARCAD1-202ENST00000359052 LCORLQ8N3X6 602 aa1.54□□□□□ -2.16
SMARCAD1-202ENST00000359052 FAM89BQ8N5H3 189 aa1.54□□□□□ -2.16
SMARCAD1-202ENST00000359052 LINC00337Q8N6G1 96 aa1.54□□□□□ -2.16
SMARCAD1-202ENST00000359052 COLGALT1Q8NBJ5 622 aa1.54□□□□□ -2.16
SMARCAD1-202ENST00000359052 RNF149Q8NC42 400 aa1.54□□□□□ -2.16
SMARCAD1-202ENST00000359052 CCNYQ8ND76 341 aa1.54□□□□□ -2.16
SMARCAD1-202ENST00000359052 C16orf52Q8NHV5 167 aa1.54□□□□□ -2.16
SMARCAD1-202ENST00000359052 TFAP2CQ92754 450 aa1.54□□□□□ -2.16
SMARCAD1-202ENST00000359052 CCDC3Q9BQI4 270 aa1.54□□□□□ -2.16
SMARCAD1-202ENST00000359052 DCTN5Q9BTE1 182 aa1.54□□□□□ -2.16
SMARCAD1-202ENST00000359052 C20orf27Q9GZN8 174 aa1.54□□□□□ -2.16
SMARCAD1-202ENST00000359052 SH2D2AQ9NP31 389 aa1.54□□□□□ -2.16
SMARCAD1-202ENST00000359052 SAR1AQ9NR31 198 aa1.54□□□□□ -2.16
SMARCAD1-202ENST00000359052 OAZ3Q9UMX2 235 aa1.54□□□□□ -2.16
SMARCAD1-202ENST00000359052 SNX12Q9UMY4 172 aa1.54□□□□□ -2.16
SMARCAD1-202ENST00000359052 STX8Q9UNK0 236 aa1.54□□□□□ -2.16
SMARCAD1-202ENST00000359052 PRRC2CQ9Y520 2896 aaKnown RBP1.54□□□□□ -2.16
SMARCAD1-202ENST00000359052 A0A1W2PPR1 153 aa1.54□□□□□ -2.16
SMARCAD1-202ENST00000359052 TCRBV3S1A0A5B6 114 aa1.54□□□□□ -2.16
SMARCAD1-202ENST00000359052 GAGE12BA1L429 117 aa1.54□□□□□ -2.16
SMARCAD1-202ENST00000359052 GAGE12HA6NDE8 117 aa1.54□□□□□ -2.16
SMARCAD1-202ENST00000359052 LAMTOR5O43504 91 aa1.54□□□□□ -2.16
SMARCAD1-202ENST00000359052 DPM1O60762 260 aa1.54□□□□□ -2.16
SMARCAD1-202ENST00000359052 MT-CO3P00414 261 aa1.54□□□□□ -2.16
SMARCAD1-202ENST00000359052 ADCYAP1P18509 176 aa1.54□□□□□ -2.16
SMARCAD1-202ENST00000359052 OR1E1P30953 314 aa1.54□□□□□ -2.16
SMARCAD1-202ENST00000359052 QARSP47897 775 aaKnown RBP1.54□□□□□ -2.16
SMARCAD1-202ENST00000359052 HTR5AP47898 357 aa1.54□□□□□ -2.16
SMARCAD1-202ENST00000359052 VPS41P49754 854 aa1.54□□□□□ -2.16
SMARCAD1-202ENST00000359052 SSTP61278 116 aa1.54□□□□□ -2.16
SMARCAD1-202ENST00000359052 EWSR1Q01844 656 aaKnown RBP eCLIP1.54□□□□□ -2.16
SMARCAD1-202ENST00000359052 DYNC1I2Q13409 638 aaKnown RBP1.54□□□□□ -2.16
SMARCAD1-202ENST00000359052 RFTN2Q52LD8 501 aaPredicted RBP1.54□□□□□ -2.16
SMARCAD1-202ENST00000359052 OTUD1Q5VV17 481 aaPredicted RBP1.54□□□□□ -2.16
SMARCAD1-202ENST00000359052 IL20RBQ6UXL0 311 aa1.54□□□□□ -2.16
SMARCAD1-202ENST00000359052 CLEC9AQ6UXN8 241 aa1.54□□□□□ -2.16
SMARCAD1-202ENST00000359052 P2RY8Q86VZ1 359 aa1.54□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms